RNA–Protein interactions for RNA: ENST00000476098.5

BEST3-204, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 1,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-204ENST00000476098 BFSP1Q12934 665 aa12.67□□□□□ -0.38
BEST3-204ENST00000476098 DSC3Q14574 896 aa12.67□□□□□ -0.38
BEST3-204ENST00000476098 C1orf220Q5T0J3 134 aa12.67□□□□□ -0.38
BEST3-204ENST00000476098 TMEM192Q8IY95 271 aa12.67□□□□□ -0.38
BEST3-204ENST00000476098 PARD3BQ8TEW8 1205 aa12.67□□□□□ -0.38
BEST3-204ENST00000476098 SLC35C1Q96A29 364 aa12.67□□□□□ -0.38
BEST3-204ENST00000476098 NDST4Q9H3R1 872 aa12.67□□□□□ -0.38
BEST3-204ENST00000476098 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.67□□□□□ -0.38
BEST3-204ENST00000476098 SIP14410 1827 aa12.66□□□□□ -0.38
BEST3-204ENST00000476098 LGALS16A8MUM7 142 aa12.66□□□□□ -0.38
BEST3-204ENST00000476098 MEFVO15553 781 aaPredicted RBP12.66□□□□□ -0.38
BEST3-204ENST00000476098 TEX33O43247 280 aa12.66□□□□□ -0.38
BEST3-204ENST00000476098 MGEA5O60502 916 aa12.66□□□□□ -0.38
BEST3-204ENST00000476098 CLTAP09496 248 aa12.66□□□□□ -0.38
BEST3-204ENST00000476098 KRT13P13646 458 aa12.66□□□□□ -0.38
BEST3-204ENST00000476098 CCL23P55773 120 aa12.66□□□□□ -0.38
BEST3-204ENST00000476098 WNT7BP56706 349 aa12.66□□□□□ -0.38
BEST3-204ENST00000476098 ENPEPQ07075 957 aa12.66□□□□□ -0.38
BEST3-204ENST00000476098 KCNH2Q12809 1159 aa12.66□□□□□ -0.38
BEST3-204ENST00000476098 HSP90AA2PQ14568 343 aaPredicted RBP12.66□□□□□ -0.38
BEST3-204ENST00000476098 PSMD6Q15008 389 aa12.66□□□□□ -0.38
BEST3-204ENST00000476098 ENOX2Q16206 610 aaKnown RBP12.66□□□□□ -0.38
BEST3-204ENST00000476098 KYAT1Q16773 422 aa12.66□□□□□ -0.38
BEST3-204ENST00000476098 FILIP1LQ4L180 1135 aa12.66□□□□□ -0.38
BEST3-204ENST00000476098 DCAF17Q5H9S7 520 aaPredicted RBP12.66□□□□□ -0.38
BEST3-204ENST00000476098 TWF2Q6IBS0 349 aaKnown RBP12.66□□□□□ -0.38
BEST3-204ENST00000476098 APBB1IPQ7Z5R6 666 aaPredicted RBP12.66□□□□□ -0.38
BEST3-204ENST00000476098 BRSK2Q8IWQ3 736 aa12.66□□□□□ -0.38
BEST3-204ENST00000476098 TMC2Q8TDI7 906 aa12.66□□□□□ -0.38
BEST3-204ENST00000476098 IFIH1Q9BYX4 1025 aaKnown RBP12.66□□□□□ -0.38
BEST3-204ENST00000476098 PPP1R12CQ9BZL4 782 aa12.66□□□□□ -0.38
BEST3-204ENST00000476098 RBAKQ9NYW8 714 aaPredicted RBP12.66□□□□□ -0.38
BEST3-204ENST00000476098 TRIM43BA6NCK2 446 aa12.65□□□□□ -0.38
BEST3-204ENST00000476098 CBFA2T2O43439 604 aa12.65□□□□□ -0.38
BEST3-204ENST00000476098 TPM2P07951 284 aa12.65□□□□□ -0.38
BEST3-204ENST00000476098 TRIM49P0CI25 452 aa12.65□□□□□ -0.38
BEST3-204ENST00000476098 TRIM49CP0CI26 452 aa12.65□□□□□ -0.38
BEST3-204ENST00000476098 ZSCAN20P17040 1043 aaPredicted RBP12.65□□□□□ -0.38
BEST3-204ENST00000476098 GRM5P41594 1212 aa12.65□□□□□ -0.38
BEST3-204ENST00000476098 CLDN10P78369 228 aa12.65□□□□□ -0.38
BEST3-204ENST00000476098 POU5F1Q01860 360 aaKnown RBP12.65□□□□□ -0.38
BEST3-204ENST00000476098 PPP2R3AQ06190 1150 aa12.65□□□□□ -0.38
BEST3-204ENST00000476098 PLEKHG4Q58EX7 1191 aa12.65□□□□□ -0.38
BEST3-204ENST00000476098 SMG8Q8ND04 991 aaKnown RBP12.65□□□□□ -0.38
BEST3-204ENST00000476098 TRIM43Q96BQ3 446 aaPredicted RBP12.65□□□□□ -0.38
BEST3-204ENST00000476098 CCDC127Q96BQ5 260 aa12.65□□□□□ -0.38
BEST3-204ENST00000476098 MRFAP1L1Q96HT8 127 aa12.65□□□□□ -0.38
BEST3-204ENST00000476098 SCLYQ96I15 445 aa12.65□□□□□ -0.38
BEST3-204ENST00000476098 POP1Q99575 1024 aaKnown RBP12.65□□□□□ -0.38
BEST3-204ENST00000476098 TRAIPQ9BWF2 469 aa12.65□□□□□ -0.38
BEST3-204ENST00000476098 PDE11AQ9HCR9 933 aa12.65□□□□□ -0.38
BEST3-204ENST00000476098 SNTG2Q9NY99 539 aa12.65□□□□□ -0.38
BEST3-204ENST00000476098 HES2Q9Y543 173 aa12.65□□□□□ -0.38
BEST3-204ENST00000476098 LRRIQ3A6PVS8 624 aaPredicted RBP12.64□□□□□ -0.39
BEST3-204ENST00000476098 PES1O00541 588 aaKnown RBP12.64□□□□□ -0.39
BEST3-204ENST00000476098 KIAA0355O15063 1070 aa12.64□□□□□ -0.39
BEST3-204ENST00000476098 PARNO95453 639 aaKnown RBP12.64□□□□□ -0.39
BEST3-204ENST00000476098 AFPP02771 609 aaKnown RBP12.64□□□□□ -0.39
BEST3-204ENST00000476098 CXCL10P02778 98 aa12.64□□□□□ -0.39
BEST3-204ENST00000476098 CXCL8P10145 99 aa12.64□□□□□ -0.39
BEST3-204ENST00000476098 ITGB8P26012 769 aa12.64□□□□□ -0.39
BEST3-204ENST00000476098 UBXN1Q04323 297 aa12.64□□□□□ -0.39
BEST3-204ENST00000476098 PTPN21Q16825 1174 aa12.64□□□□□ -0.39
BEST3-204ENST00000476098 SLC10A6Q3KNW5 377 aa12.64□□□□□ -0.39
BEST3-204ENST00000476098 TCERG1LQ5VWI1 586 aa12.64□□□□□ -0.39
BEST3-204ENST00000476098 RTN4RL1Q86UN2 441 aaPredicted RBP12.64□□□□□ -0.39
BEST3-204ENST00000476098 ABHD8Q96I13 439 aa12.64□□□□□ -0.39
BEST3-204ENST00000476098 ACAP3Q96P50 834 aa12.64□□□□□ -0.39
BEST3-204ENST00000476098 ADAM2Q99965 735 aa12.64□□□□□ -0.39
BEST3-204ENST00000476098 TRIM6Q9C030 488 aaPredicted RBP12.64□□□□□ -0.39
BEST3-204ENST00000476098 RNF39Q9H2S5 420 aa12.64□□□□□ -0.39
BEST3-204ENST00000476098 NXF3Q9H4D5 531 aaKnown RBP12.64□□□□□ -0.39
BEST3-204ENST00000476098 RPF1Q9H9Y2 349 aaKnown RBP12.64□□□□□ -0.39
BEST3-204ENST00000476098 FAM105AQ9NUU6 356 aa12.64□□□□□ -0.39
BEST3-204ENST00000476098 IPPQ9Y573 584 aa12.64□□□□□ -0.39
BEST3-204ENST00000476098 PCDHB2Q9Y5E7 798 aa12.64□□□□□ -0.39
BEST3-204ENST00000476098 TIMP1P01033 207 aa12.64□□□□□ -0.39
BEST3-204ENST00000476098 TPM3P06753 285 aa12.64□□□□□ -0.39
BEST3-204ENST00000476098 DLATP10515 647 aaKnown RBP12.64□□□□□ -0.39
BEST3-204ENST00000476098 PBX1P40424 430 aa12.64□□□□□ -0.39
BEST3-204ENST00000476098 PPP3CAQ08209 521 aa12.64□□□□□ -0.39
BEST3-204ENST00000476098 USP37Q86T82 979 aa12.64□□□□□ -0.39
BEST3-204ENST00000476098 DBF4BQ8NFT6 615 aa12.64□□□□□ -0.39
BEST3-204ENST00000476098 ZNF516Q92618 1163 aa12.64□□□□□ -0.39
BEST3-204ENST00000476098 VWCEQ96DN2 955 aa12.64□□□□□ -0.39
BEST3-204ENST00000476098 CCDC94Q9BW85 323 aaPredicted RBP12.64□□□□□ -0.39
BEST3-204ENST00000476098 TOPORSQ9NS56 1045 aaPredicted RBP12.64□□□□□ -0.39
BEST3-204ENST00000476098 A0A0U1RQF3 1178 aa12.63□□□□□ -0.39
BEST3-204ENST00000476098 TTC26A0AVF1 554 aa12.63□□□□□ -0.39
BEST3-204ENST00000476098 LACTBL1A8MY62 500 aa12.63□□□□□ -0.39
BEST3-204ENST00000476098 ZNF623O75123 536 aa12.63□□□□□ -0.39
BEST3-204ENST00000476098 AKAP5P24588 427 aa12.63□□□□□ -0.39
BEST3-204ENST00000476098 FMO5P49326 533 aa12.63□□□□□ -0.39
BEST3-204ENST00000476098 TCTN1Q2MV58 587 aa12.63□□□□□ -0.39
BEST3-204ENST00000476098 CBWD6Q4V339 395 aa12.63□□□□□ -0.39
BEST3-204ENST00000476098 CBWD3Q5JTY5 395 aa12.63□□□□□ -0.39
BEST3-204ENST00000476098 CBWD5Q5RIA9 395 aa12.63□□□□□ -0.39
BEST3-204ENST00000476098 ALKAL1Q6UXT8 129 aa12.63□□□□□ -0.39
BEST3-204ENST00000476098 MRPL10Q7Z7H8 261 aaKnown RBP12.63□□□□□ -0.39
BEST3-204ENST00000476098 FAM212AQ96EL1 285 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms