RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 C2orf71A6NGG8 1288 aa17.17■□□□□ 0.34
CPSF3-203ENST00000475482 LRRIQ4A6NIV6 560 aa17.17■□□□□ 0.34
CPSF3-203ENST00000475482 PP2D1A8MPX8 630 aa17.17■□□□□ 0.34
CPSF3-203ENST00000475482 PI4K2BG5E9Z4 385 aa17.17■□□□□ 0.34
CPSF3-203ENST00000475482 EFEMP2O95967 443 aa17.17■□□□□ 0.34
CPSF3-203ENST00000475482 ITGA4P13612 1032 aa17.17■□□□□ 0.34
CPSF3-203ENST00000475482 PLCG1P19174 1290 aa17.17■□□□□ 0.34
CPSF3-203ENST00000475482 CDC25AP30304 524 aa17.17■□□□□ 0.34
CPSF3-203ENST00000475482 NAMPTP43490 491 aa17.17■□□□□ 0.34
CPSF3-203ENST00000475482 SLC11A1P49279 550 aa17.17■□□□□ 0.34
CPSF3-203ENST00000475482 RBM10P98175 930 aaKnown RBP17.17■□□□□ 0.34
CPSF3-203ENST00000475482 SMC1AQ14683 1233 aaKnown RBP17.17■□□□□ 0.34
CPSF3-203ENST00000475482 HYIQ5T013 277 aa17.17■□□□□ 0.34
CPSF3-203ENST00000475482 TMC7Q7Z402 723 aa17.17■□□□□ 0.34
CPSF3-203ENST00000475482 TRIML1Q8N9V2 468 aa17.17■□□□□ 0.34
CPSF3-203ENST00000475482 GSTCDQ8NEC7 633 aa17.17■□□□□ 0.34
CPSF3-203ENST00000475482 URGCPQ8TCY9 931 aa17.17■□□□□ 0.34
CPSF3-203ENST00000475482 SMARCE1Q969G3 411 aa17.17■□□□□ 0.34
CPSF3-203ENST00000475482 FUCA2Q9BTY2 467 aa17.17■□□□□ 0.34
CPSF3-203ENST00000475482 VN1R3Q9BXE9 311 aa17.17■□□□□ 0.34
CPSF3-203ENST00000475482 NAT10Q9H0A0 1025 aaKnown RBP17.17■□□□□ 0.34
CPSF3-203ENST00000475482 CCDC113Q9H0I3 377 aa17.17■□□□□ 0.34
CPSF3-203ENST00000475482 C2orf40Q9H1Z8 148 aa17.17■□□□□ 0.34
CPSF3-203ENST00000475482 EPHX3Q9H6B9 360 aa17.17■□□□□ 0.34
CPSF3-203ENST00000475482 ENTPD7Q9NQZ7 604 aa17.17■□□□□ 0.34
CPSF3-203ENST00000475482 PRMT7Q9NVM4 692 aaPredicted RBP17.17■□□□□ 0.34
CPSF3-203ENST00000475482 BARX2Q9UMQ3 279 aaPredicted RBP17.17■□□□□ 0.34
CPSF3-203ENST00000475482 GIT1Q9Y2X7 761 aa17.17■□□□□ 0.34
CPSF3-203ENST00000475482 HES2Q9Y543 173 aa17.17■□□□□ 0.34
CPSF3-203ENST00000475482 ARL5CA6NH57 179 aa17.16■□□□□ 0.34
CPSF3-203ENST00000475482 TTLL13PA6NNM8 815 aa17.16■□□□□ 0.34
CPSF3-203ENST00000475482 CTSAP10619 480 aa17.16■□□□□ 0.34
CPSF3-203ENST00000475482 MRE11P49959 708 aa17.16■□□□□ 0.34
CPSF3-203ENST00000475482 RNASELQ05823 741 aaKnown RBP17.16■□□□□ 0.34
CPSF3-203ENST00000475482 DSC1Q08554 894 aa17.16■□□□□ 0.34
CPSF3-203ENST00000475482 CLUL1Q15846 466 aa17.16■□□□□ 0.34
CPSF3-203ENST00000475482 SLC27A1Q6PCB7 646 aa17.16■□□□□ 0.34
CPSF3-203ENST00000475482 COLGALT2Q8IYK4 626 aa17.16■□□□□ 0.34
CPSF3-203ENST00000475482 VPS52Q8N1B4 723 aa17.16■□□□□ 0.34
CPSF3-203ENST00000475482 SUSD6Q92537 303 aa17.16■□□□□ 0.34
CPSF3-203ENST00000475482 KIFAP3Q92845 792 aa17.16■□□□□ 0.34
CPSF3-203ENST00000475482 CCDC47Q96A33 483 aaKnown RBP17.16■□□□□ 0.34
CPSF3-203ENST00000475482 PAGE5Q96GU1 130 aa17.16■□□□□ 0.34
CPSF3-203ENST00000475482 GAD1Q99259 594 aa17.16■□□□□ 0.34
CPSF3-203ENST00000475482 GTPBP4Q9BZE4 634 aaKnown RBP17.16■□□□□ 0.34
CPSF3-203ENST00000475482 S1PR5Q9H228 398 aa17.16■□□□□ 0.34
CPSF3-203ENST00000475482 RMND1Q9NWS8 449 aa17.16■□□□□ 0.34
CPSF3-203ENST00000475482 MIOSQ9NXC5 875 aa17.16■□□□□ 0.34
CPSF3-203ENST00000475482 ACKR2O00590 384 aa17.15■□□□□ 0.34
CPSF3-203ENST00000475482 POMCP01189 267 aa17.15■□□□□ 0.34
CPSF3-203ENST00000475482 ALDH2P05091 517 aa17.15■□□□□ 0.34
CPSF3-203ENST00000475482 AFMP43652 599 aa17.15■□□□□ 0.34
CPSF3-203ENST00000475482 PNOCQ13519 176 aa17.15■□□□□ 0.34
CPSF3-203ENST00000475482 PPP2R5AQ15172 486 aa17.15■□□□□ 0.34
CPSF3-203ENST00000475482 NT5DC1Q5TFE4 455 aa17.15■□□□□ 0.34
CPSF3-203ENST00000475482 SYCE2Q6PIF2 218 aa17.15■□□□□ 0.34
CPSF3-203ENST00000475482 ZBTB8OSQ8IWT0 167 aa17.15■□□□□ 0.34
CPSF3-203ENST00000475482 DAW1Q8N136 415 aa17.15■□□□□ 0.34
CPSF3-203ENST00000475482 GSDMAQ96QA5 445 aa17.15■□□□□ 0.34
CPSF3-203ENST00000475482 C1QTNF1Q9BXJ1 281 aa17.15■□□□□ 0.34
CPSF3-203ENST00000475482 NXF3Q9H4D5 531 aaKnown RBP17.15■□□□□ 0.34
CPSF3-203ENST00000475482 STK39Q9UEW8 545 aa17.15■□□□□ 0.34
CPSF3-203ENST00000475482 DNM3Q9UQ16 869 aa17.15■□□□□ 0.34
CPSF3-203ENST00000475482 E9PMD0 336 aa17.14■□□□□ 0.33
CPSF3-203ENST00000475482 NRP1O14786 923 aa17.14■□□□□ 0.33
CPSF3-203ENST00000475482 LILRB3O75022 631 aa17.14■□□□□ 0.33
CPSF3-203ENST00000475482 CLASP2O75122 1294 aaKnown RBP17.14■□□□□ 0.33
CPSF3-203ENST00000475482 EDN1P05305 212 aa17.14■□□□□ 0.33
CPSF3-203ENST00000475482 MLH1P40692 756 aa17.14■□□□□ 0.33
CPSF3-203ENST00000475482 GIT2Q14161 759 aa17.14■□□□□ 0.33
CPSF3-203ENST00000475482 MAPK6Q16659 721 aa17.14■□□□□ 0.33
CPSF3-203ENST00000475482 TMEM119Q4V9L6 283 aa17.14■□□□□ 0.33
CPSF3-203ENST00000475482 ANKRD54Q6NXT1 300 aa17.14■□□□□ 0.33
CPSF3-203ENST00000475482 C1orf186Q6ZWK4 172 aa17.14■□□□□ 0.33
CPSF3-203ENST00000475482 SV2BQ7L1I2 683 aa17.14■□□□□ 0.33
CPSF3-203ENST00000475482 KCNK18Q7Z418 384 aa17.14■□□□□ 0.33
CPSF3-203ENST00000475482 CDR2LQ86X02 465 aaPredicted RBP17.14■□□□□ 0.33
CPSF3-203ENST00000475482 RNF168Q8IYW5 571 aaPredicted RBP17.14■□□□□ 0.33
CPSF3-203ENST00000475482 LARP4BQ92615 738 aaKnown RBP17.14■□□□□ 0.33
CPSF3-203ENST00000475482 ZFP42Q96MM3 310 aa17.14■□□□□ 0.33
CPSF3-203ENST00000475482 GBP3Q9H0R5 595 aa17.14■□□□□ 0.33
CPSF3-203ENST00000475482 PDZD7Q9H5P4 517 aa17.14■□□□□ 0.33
CPSF3-203ENST00000475482 KBTBD4Q9NVX7 518 aa17.14■□□□□ 0.33
CPSF3-203ENST00000475482 MARCH5Q9NX47 278 aa17.14■□□□□ 0.33
CPSF3-203ENST00000475482 DACH1Q9UI36 760 aa17.14■□□□□ 0.33
CPSF3-203ENST00000475482 FAN1Q9Y2M0 1017 aa17.14■□□□□ 0.33
CPSF3-203ENST00000475482 USP15Q9Y4E8 981 aaPredicted RBP17.14■□□□□ 0.33
CPSF3-203ENST00000475482 PCDHA5Q9Y5H7 936 aa17.14■□□□□ 0.33
CPSF3-203ENST00000475482 HCFC2Q9Y5Z7 792 aa17.14■□□□□ 0.33
CPSF3-203ENST00000475482 MYH11P35749 1972 aa17.14■□□□□ 0.33
CPSF3-203ENST00000475482 TRIP11Q15643 1979 aa17.14■□□□□ 0.33
CPSF3-203ENST00000475482 NPTXRO95502 500 aa17.13■□□□□ 0.33
CPSF3-203ENST00000475482 CXCL14O95715 111 aa17.13■□□□□ 0.33
CPSF3-203ENST00000475482 HOXB8P17481 243 aaPredicted RBP17.13■□□□□ 0.33
CPSF3-203ENST00000475482 EFNA5P52803 228 aa17.13■□□□□ 0.33
CPSF3-203ENST00000475482 NLRP12P59046 1061 aa17.13■□□□□ 0.33
CPSF3-203ENST00000475482 MAPK7Q13164 816 aa17.13■□□□□ 0.33
CPSF3-203ENST00000475482 BMS1Q14692 1282 aaKnown RBP17.13■□□□□ 0.33
CPSF3-203ENST00000475482 RINT1Q6NUQ1 792 aa17.13■□□□□ 0.33
CPSF3-203ENST00000475482 GAS2L3Q86XJ1 694 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms