RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 CRNKL1Q9BZJ0 848 aaKnown RBP4.41□□□□□ -1.7
USP16-205ENST00000474835 POLD4Q9HCU8 107 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 GALNT8Q9NY28 637 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 ITGB1BP2Q9UKP3 347 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 KCNJ14Q9UNX9 436 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 B3GNT3Q9Y2A9 372 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 ATF5Q9Y2D1 282 aaPredicted RBP4.41□□□□□ -1.7
USP16-205ENST00000474835 RTCBQ9Y3I0 505 aaKnown RBP4.41□□□□□ -1.7
USP16-205ENST00000474835 FAM32AQ9Y421 112 aaKnown RBP4.41□□□□□ -1.7
USP16-205ENST00000474835 SLC30A1Q9Y6M5 507 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 TRIM75PA6NK02 468 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 DAPK3O43293 454 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 EVI5O60447 810 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 PHF2O75151 1096 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 PSMG1O95456 288 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 NCAM1P13591 858 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 PIP4K2AP48426 406 aaPredicted RBP4.41□□□□□ -1.7
USP16-205ENST00000474835 HDAC4P56524 1084 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 ZC3H6P61129 1189 aaKnown RBP4.41□□□□□ -1.7
USP16-205ENST00000474835 SLC18A2Q05940 514 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 SLC39A6Q13433 755 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 PRKD1Q15139 912 aaPredicted RBP4.41□□□□□ -1.7
USP16-205ENST00000474835 PPP2R5EQ16537 467 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 TXNRD1Q16881 649 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 KBTBD12Q3ZCT8 623 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 C1orf220Q5T0J3 134 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 CEP128Q6ZU80 1094 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 NET1Q7Z628 596 aaPredicted RBP4.41□□□□□ -1.7
USP16-205ENST00000474835 ZNF654Q8IZM8 581 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 RBM15BQ8NDT2 890 aaKnown RBP4.41□□□□□ -1.7
USP16-205ENST00000474835 FAM172AQ8WUF8 416 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 DNAJC9Q8WXX5 260 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 ESR2Q92731 530 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 LRGUKQ96M69 825 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 PANX3Q96QZ0 392 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 NUP88Q99567 741 aaPredicted RBP4.41□□□□□ -1.7
USP16-205ENST00000474835 ASAP1Q9ULH1 1129 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 BRWD3Q6RI45 1802 aa4.4□□□□□ -1.7
USP16-205ENST00000474835 SH3PXD2BA1X283 911 aa4.4□□□□□ -1.7
USP16-205ENST00000474835 RASA4BC9J798 803 aa4.4□□□□□ -1.7
USP16-205ENST00000474835 PGRMC1O00264 195 aaKnown RBP4.4□□□□□ -1.7
USP16-205ENST00000474835 TTI1O43156 1089 aa4.4□□□□□ -1.7
USP16-205ENST00000474835 ATMINO43313 823 aaPredicted RBP4.4□□□□□ -1.7
USP16-205ENST00000474835 RASA4O43374 803 aa4.4□□□□□ -1.7
USP16-205ENST00000474835 ABCB7O75027 752 aa4.4□□□□□ -1.7
USP16-205ENST00000474835 ECEL1O95672 775 aa4.4□□□□□ -1.7
USP16-205ENST00000474835 PRDX6P30041 224 aa4.4□□□□□ -1.7
USP16-205ENST00000474835 KRT2P35908 639 aa4.4□□□□□ -1.7
USP16-205ENST00000474835 TGFBIQ15582 683 aa4.4□□□□□ -1.7
USP16-205ENST00000474835 TMEM259Q4ZIN3 620 aa4.4□□□□□ -1.7
USP16-205ENST00000474835 TTC38Q5R3I4 469 aa4.4□□□□□ -1.7
USP16-205ENST00000474835 FAM83BQ5T0W9 1011 aa4.4□□□□□ -1.7
USP16-205ENST00000474835 KLHL10Q6JEL2 608 aa4.4□□□□□ -1.7
USP16-205ENST00000474835 LRRC74BQ6ZQY2 392 aa4.4□□□□□ -1.7
USP16-205ENST00000474835 ANKRD13DQ6ZTN6 518 aa4.4□□□□□ -1.7
USP16-205ENST00000474835 NCCRP1Q6ZVX7 275 aaPredicted RBP4.4□□□□□ -1.7
USP16-205ENST00000474835 MARK2Q7KZI7 788 aaKnown RBP4.4□□□□□ -1.7
USP16-205ENST00000474835 KBTBD6Q86V97 674 aa4.4□□□□□ -1.7
USP16-205ENST00000474835 TMTC2Q8N394 836 aa4.4□□□□□ -1.7
USP16-205ENST00000474835 SMC1BQ8NDV3 1235 aa4.4□□□□□ -1.7
USP16-205ENST00000474835 PPP1R14CQ8TAE6 165 aa4.4□□□□□ -1.7
USP16-205ENST00000474835 CABLES1Q8TDN4 633 aa4.4□□□□□ -1.7
USP16-205ENST00000474835 DDX1Q92499 740 aaKnown RBP4.4□□□□□ -1.7
USP16-205ENST00000474835 ZNF496Q96IT1 587 aaPredicted RBP4.4□□□□□ -1.7
USP16-205ENST00000474835 FEM1CQ96JP0 617 aa4.4□□□□□ -1.7
USP16-205ENST00000474835 CAPZA3Q96KX2 299 aa4.4□□□□□ -1.7
USP16-205ENST00000474835 UBAC1Q9BSL1 405 aa4.4□□□□□ -1.7
USP16-205ENST00000474835 TSPYL2Q9H2G4 693 aaPredicted RBP4.4□□□□□ -1.7
USP16-205ENST00000474835 SEMA4AQ9H3S1 761 aa4.4□□□□□ -1.7
USP16-205ENST00000474835 RIC8AQ9NPQ8 531 aa4.4□□□□□ -1.7
USP16-205ENST00000474835 INCENPQ9NQS7 918 aa4.4□□□□□ -1.7
USP16-205ENST00000474835 SLC38A7Q9NVC3 462 aa4.4□□□□□ -1.7
USP16-205ENST00000474835 IRAK4Q9NWZ3 460 aa4.4□□□□□ -1.7
USP16-205ENST00000474835 CTTNBP2NLQ9P2B4 639 aa4.4□□□□□ -1.7
USP16-205ENST00000474835 SYNPO2Q9UMS6 1093 aa4.4□□□□□ -1.7
USP16-205ENST00000474835 FARP1Q9Y4F1 1045 aaPredicted RBP4.4□□□□□ -1.7
USP16-205ENST00000474835 TRPM7Q96QT4 1865 aa4.4□□□□□ -1.7
USP16-205ENST00000474835 TNS1Q9HBL0 1735 aaKnown RBP4.4□□□□□ -1.71
USP16-205ENST00000474835 RBM47A0AV96 593 aaKnown RBP4.4□□□□□ -1.71
USP16-205ENST00000474835 MYMKA6NI61 221 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 SMIM22K7EJ46 135 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 TTLL1O95922 423 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 ITGBL1O95965 494 aaPredicted RBP4.4□□□□□ -1.71
USP16-205ENST00000474835 OATP04181 439 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 SLC5A1P13866 664 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 HOXD10P28358 340 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 SCNN1BP51168 640 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 CACNA2D1P54289 1103 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 PTK2Q05397 1052 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 CDC16Q13042 620 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 ARSHQ5FYA8 562 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 KIAA1755Q5JYT7 1200 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 GGT6Q6P531 493 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 MAMDC4Q6UXC1 1216 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 LINC00299Q6ZSB3 139 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 ANKLE2Q86XL3 938 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 JAMLQ86YT9 394 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 CHPT1Q8WUD6 406 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 ZNF184Q99676 751 aaPredicted RBP4.4□□□□□ -1.71
USP16-205ENST00000474835 SRRDQ9UH36 339 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms