RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 EEF1DP3Q658K8 133 aa12.43□□□□□ -0.42
ACTB-209ENST00000473257 SLC27A1Q6PCB7 646 aa12.43□□□□□ -0.42
ACTB-209ENST00000473257 LILRA6Q6PI73 481 aa12.43□□□□□ -0.42
ACTB-209ENST00000473257 GRASPQ7Z6J2 395 aaPredicted RBP12.43□□□□□ -0.42
ACTB-209ENST00000473257 CEP57Q86XR8 500 aa12.43□□□□□ -0.42
ACTB-209ENST00000473257 IFNLR1Q8IU57 520 aaPredicted RBP12.43□□□□□ -0.42
ACTB-209ENST00000473257 NOSTRINQ8IVI9 506 aa12.43□□□□□ -0.42
ACTB-209ENST00000473257 DIS3L2Q8IYB7 885 aaKnown RBP12.43□□□□□ -0.42
ACTB-209ENST00000473257 EXOC8Q8IYI6 725 aa12.43□□□□□ -0.42
ACTB-209ENST00000473257 FAM177A1Q8N128 213 aaPredicted RBP12.43□□□□□ -0.42
ACTB-209ENST00000473257 CNNM3Q8NE01 707 aa12.43□□□□□ -0.42
ACTB-209ENST00000473257 CCDC51Q96ER9 411 aa12.43□□□□□ -0.42
ACTB-209ENST00000473257 CCDC43Q96MW1 224 aaKnown RBP12.43□□□□□ -0.42
ACTB-209ENST00000473257 KIFC3Q9BVG8 833 aa12.43□□□□□ -0.42
ACTB-209ENST00000473257 FOXQ1Q9C009 403 aa12.43□□□□□ -0.42
ACTB-209ENST00000473257 ANKEF1Q9NU02 776 aa12.43□□□□□ -0.42
ACTB-209ENST00000473257 SNTG2Q9NY99 539 aa12.43□□□□□ -0.42
ACTB-209ENST00000473257 EPS15L1Q9UBC2 864 aa12.43□□□□□ -0.42
ACTB-209ENST00000473257 ADAM28Q9UKQ2 775 aa12.43□□□□□ -0.42
ACTB-209ENST00000473257 GIT1Q9Y2X7 761 aa12.43□□□□□ -0.42
ACTB-209ENST00000473257 NCOR2Q9Y618 2525 aa12.43□□□□□ -0.42
ACTB-209ENST00000473257 DNAH14Q0VDD8 3507 aa12.42□□□□□ -0.42
ACTB-209ENST00000473257 CACNA1IQ9P0X4 2223 aa12.42□□□□□ -0.42
ACTB-209ENST00000473257 A0A1B0GUA9 196 aa12.42□□□□□ -0.42
ACTB-209ENST00000473257 PTGESO14684 152 aa12.42□□□□□ -0.42
ACTB-209ENST00000473257 CCL16O15467 120 aa12.42□□□□□ -0.42
ACTB-209ENST00000473257 NEMFO60524 1076 aa12.42□□□□□ -0.42
ACTB-209ENST00000473257 DGAT1O75907 488 aa12.42□□□□□ -0.42
ACTB-209ENST00000473257 LYPLA2O95372 231 aa12.42□□□□□ -0.42
ACTB-209ENST00000473257 LAMP2P13473 410 aa12.42□□□□□ -0.42
ACTB-209ENST00000473257 RFX1P22670 979 aa12.42□□□□□ -0.42
ACTB-209ENST00000473257 MCM7P33993 719 aa12.42□□□□□ -0.42
ACTB-209ENST00000473257 NCBP1Q09161 790 aaKnown RBP12.42□□□□□ -0.42
ACTB-209ENST00000473257 HTR4Q13639 388 aa12.42□□□□□ -0.42
ACTB-209ENST00000473257 HSP90AA2PQ14568 343 aaPredicted RBP12.42□□□□□ -0.42
ACTB-209ENST00000473257 USP41Q3LFD5 358 aa12.42□□□□□ -0.42
ACTB-209ENST00000473257 NSUN7Q8NE18 718 aaKnown RBP12.42□□□□□ -0.42
ACTB-209ENST00000473257 MTMR9Q96QG7 549 aa12.42□□□□□ -0.42
ACTB-209ENST00000473257 NAP1L4Q99733 375 aaKnown RBP12.42□□□□□ -0.42
ACTB-209ENST00000473257 CLSTN3Q9BQT9 956 aa12.42□□□□□ -0.42
ACTB-209ENST00000473257 PRKD2Q9BZL6 878 aa12.42□□□□□ -0.42
ACTB-209ENST00000473257 PDZD7Q9H5P4 517 aa12.42□□□□□ -0.42
ACTB-209ENST00000473257 IGSF9Q9P2J2 1179 aa12.42□□□□□ -0.42
ACTB-209ENST00000473257 NUMBLQ9Y6R0 609 aa12.42□□□□□ -0.42
ACTB-209ENST00000473257 OTOGLQ3ZCN5 2332 aa12.42□□□□□ -0.42
ACTB-209ENST00000473257 SPTBN2O15020 2390 aa12.41□□□□□ -0.42
ACTB-209ENST00000473257 I3L4J1 428 aa12.41□□□□□ -0.42
ACTB-209ENST00000473257 NR1I2O75469 434 aa12.41□□□□□ -0.42
ACTB-209ENST00000473257 ZMYND10O75800 440 aa12.41□□□□□ -0.42
ACTB-209ENST00000473257 RECQL4O94761 1208 aa12.41□□□□□ -0.42
ACTB-209ENST00000473257 SRFP11831 508 aa12.41□□□□□ -0.42
ACTB-209ENST00000473257 GLULP15104 373 aa12.41□□□□□ -0.42
ACTB-209ENST00000473257 GRIK3Q13003 919 aa12.41□□□□□ -0.42
ACTB-209ENST00000473257 TMEM132AQ24JP5 1023 aa12.41□□□□□ -0.42
ACTB-209ENST00000473257 GLRA4Q5JXX5 417 aa12.41□□□□□ -0.42
ACTB-209ENST00000473257 FAM171A1Q5VUB5 890 aa12.41□□□□□ -0.42
ACTB-209ENST00000473257 PARM1Q6UWI2 310 aa12.41□□□□□ -0.42
ACTB-209ENST00000473257 RSPO2Q6UXX9 243 aaPredicted RBP12.41□□□□□ -0.42
ACTB-209ENST00000473257 CATSPER3Q86XQ3 398 aa12.41□□□□□ -0.42
ACTB-209ENST00000473257 ITFG1Q8TB96 612 aa12.41□□□□□ -0.42
ACTB-209ENST00000473257 KCNG4Q8TDN1 519 aa12.41□□□□□ -0.42
ACTB-209ENST00000473257 STAMQ92783 540 aa12.41□□□□□ -0.42
ACTB-209ENST00000473257 FGF14Q92915 247 aa12.41□□□□□ -0.42
ACTB-209ENST00000473257 GTF3C6Q969F1 213 aa12.41□□□□□ -0.42
ACTB-209ENST00000473257 HCFC1R1Q9NWW0 138 aa12.41□□□□□ -0.42
ACTB-209ENST00000473257 STK39Q9UEW8 545 aa12.41□□□□□ -0.42
ACTB-209ENST00000473257 POLIQ9UNA4 740 aa12.41□□□□□ -0.42
ACTB-209ENST00000473257 SSX2IPQ9Y2D8 614 aa12.41□□□□□ -0.42
ACTB-209ENST00000473257 GDAQ9Y2T3 454 aa12.41□□□□□ -0.42
ACTB-209ENST00000473257 MTCL1Q9Y4B5 1905 aaKnown RBP12.41□□□□□ -0.42
ACTB-209ENST00000473257 ANHXE9PGG2 379 aa12.4□□□□□ -0.42
ACTB-209ENST00000473257 FSHRP23945 695 aa12.4□□□□□ -0.42
ACTB-209ENST00000473257 GPC5P78333 572 aa12.4□□□□□ -0.42
ACTB-209ENST00000473257 POU5F1BQ06416 359 aa12.4□□□□□ -0.42
ACTB-209ENST00000473257 ZNF174Q15697 407 aa12.4□□□□□ -0.42
ACTB-209ENST00000473257 NAB2Q15742 525 aa12.4□□□□□ -0.42
ACTB-209ENST00000473257 TMEM130Q8N3G9 435 aa12.4□□□□□ -0.42
ACTB-209ENST00000473257 LNX1Q8TBB1 728 aaPredicted RBP12.4□□□□□ -0.42
ACTB-209ENST00000473257 ING5Q8WYH8 240 aa12.4□□□□□ -0.42
ACTB-209ENST00000473257 WASF1Q92558 559 aa12.4□□□□□ -0.42
ACTB-209ENST00000473257 RTP3Q9BQQ7 232 aa12.4□□□□□ -0.42
ACTB-209ENST00000473257 PLEKHA4Q9H4M7 779 aa12.4□□□□□ -0.42
ACTB-209ENST00000473257 GOLGA2P5Q9HBQ8 144 aa12.4□□□□□ -0.42
ACTB-209ENST00000473257 BRMS1Q9HCU9 246 aa12.4□□□□□ -0.42
ACTB-209ENST00000473257 FNIP2Q9P278 1114 aa12.4□□□□□ -0.42
ACTB-209ENST00000473257 WNT16Q9UBV4 365 aa12.4□□□□□ -0.42
ACTB-209ENST00000473257 MTF2Q9Y483 593 aaPredicted RBP12.4□□□□□ -0.42
ACTB-209ENST00000473257 SF3B1O75533 1304 aaKnown RBP eCLIP12.39□□□□□ -0.432e-7■■□□□ 13.7
ACTB-209ENST00000473257 VWA8A3KMH1 1905 aa12.39□□□□□ -0.43
ACTB-209ENST00000473257 EPB41L2O43491 1005 aaKnown RBP12.39□□□□□ -0.43
ACTB-209ENST00000473257 PRKCBP05771 671 aa12.39□□□□□ -0.43
ACTB-209ENST00000473257 CD72P21854 359 aa12.39□□□□□ -0.43
ACTB-209ENST00000473257 TUSC3Q13454 348 aa12.39□□□□□ -0.43
ACTB-209ENST00000473257 SNW1Q13573 536 aaKnown RBP12.39□□□□□ -0.43
ACTB-209ENST00000473257 NBR1Q14596 966 aa12.39□□□□□ -0.43
ACTB-209ENST00000473257 PSMD5Q16401 504 aa12.39□□□□□ -0.43
ACTB-209ENST00000473257 ECM1Q16610 540 aa12.39□□□□□ -0.43
ACTB-209ENST00000473257 CDCA2Q69YH5 1023 aaPredicted RBP12.39□□□□□ -0.43
ACTB-209ENST00000473257 POTEHQ6S545 545 aa12.39□□□□□ -0.43
ACTB-209ENST00000473257 HACE1Q8IYU2 909 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms