RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 MMEL1Q495T6 779 aa11.18□□□□□ -0.62
RRP1B-202ENST00000470886 TRABDQ9H4I3 376 aa11.18□□□□□ -0.62
RRP1B-202ENST00000470886 DNAJC17Q9NVM6 304 aaKnown RBP11.18□□□□□ -0.62
RRP1B-202ENST00000470886 DMGDHQ9UI17 866 aaKnown RBP11.18□□□□□ -0.62
RRP1B-202ENST00000470886 GTF3C4Q9UKN8 822 aa11.18□□□□□ -0.62
RRP1B-202ENST00000470886 DAGLAQ9Y4D2 1042 aa11.18□□□□□ -0.62
RRP1B-202ENST00000470886 O00370 1275 aa11.18□□□□□ -0.62
RRP1B-202ENST00000470886 STX1BP61266 288 aa11.18□□□□□ -0.62
RRP1B-202ENST00000470886 MRPS9P82933 396 aaKnown RBP11.18□□□□□ -0.62
RRP1B-202ENST00000470886 TNFAIP2Q03169 654 aa11.18□□□□□ -0.62
RRP1B-202ENST00000470886 STAMBPL1Q96FJ0 436 aa11.18□□□□□ -0.62
RRP1B-202ENST00000470886 NUDCD1Q96RS6 583 aa11.18□□□□□ -0.62
RRP1B-202ENST00000470886 HEMGNQ9BXL5 484 aa11.18□□□□□ -0.62
RRP1B-202ENST00000470886 WWP1Q9H0M0 922 aa11.18□□□□□ -0.62
RRP1B-202ENST00000470886 RPF1Q9H9Y2 349 aaKnown RBP11.18□□□□□ -0.62
RRP1B-202ENST00000470886 UBN1Q9NPG3 1134 aa11.18□□□□□ -0.62
RRP1B-202ENST00000470886 NDE1Q9NXR1 346 aa11.18□□□□□ -0.62
RRP1B-202ENST00000470886 PPARGC1AQ9UBK2 798 aaKnown RBP11.18□□□□□ -0.62
RRP1B-202ENST00000470886 CNOT7Q9UIV1 285 aaKnown RBP11.18□□□□□ -0.62
RRP1B-202ENST00000470886 PHF20L1A8MW92 1017 aa11.17□□□□□ -0.62
RRP1B-202ENST00000470886 ASAP2O43150 1006 aa11.17□□□□□ -0.62
RRP1B-202ENST00000470886 HSPA8P11142 646 aaKnown RBP11.17□□□□□ -0.62
RRP1B-202ENST00000470886 EIF2AK2P19525 551 aaKnown RBP11.17□□□□□ -0.62
RRP1B-202ENST00000470886 FGFR4P22455 802 aa11.17□□□□□ -0.62
RRP1B-202ENST00000470886 ECE1P42892 770 aa11.17□□□□□ -0.62
RRP1B-202ENST00000470886 IRX1P78414 480 aaPredicted RBP11.17□□□□□ -0.62
RRP1B-202ENST00000470886 IFRD2Q12894 506 aaPredicted RBP11.17□□□□□ -0.62
RRP1B-202ENST00000470886 ZBTB17Q13105 803 aa11.17□□□□□ -0.62
RRP1B-202ENST00000470886 PPP2R5DQ14738 602 aa11.17□□□□□ -0.62
RRP1B-202ENST00000470886 PSMD6Q15008 389 aa11.17□□□□□ -0.62
RRP1B-202ENST00000470886 OR6B2Q6IFH4 312 aa11.17□□□□□ -0.62
RRP1B-202ENST00000470886 C15orf52Q6ZUT6 534 aaKnown RBP11.17□□□□□ -0.62
RRP1B-202ENST00000470886 TTC17Q96AE7 1141 aa11.17□□□□□ -0.62
RRP1B-202ENST00000470886 CYTH2Q99418 400 aa11.17□□□□□ -0.62
RRP1B-202ENST00000470886 DDX23Q9BUQ8 820 aaKnown RBP11.17□□□□□ -0.62
RRP1B-202ENST00000470886 C2orf40Q9H1Z8 148 aa11.17□□□□□ -0.62
RRP1B-202ENST00000470886 SLC5A4Q9NY91 659 aa11.17□□□□□ -0.62
RRP1B-202ENST00000470886 WDR35Q9P2L0 1181 aa11.17□□□□□ -0.62
RRP1B-202ENST00000470886 TRPC5Q9UL62 973 aaPredicted RBP11.17□□□□□ -0.62
RRP1B-202ENST00000470886 KPNA7A9QM74 516 aa11.17□□□□□ -0.62
RRP1B-202ENST00000470886 KRT3P12035 628 aa11.17□□□□□ -0.62
RRP1B-202ENST00000470886 RARGP13631 454 aa11.17□□□□□ -0.62
RRP1B-202ENST00000470886 CYP11B2P19099 503 aa11.17□□□□□ -0.62
RRP1B-202ENST00000470886 MX2P20592 715 aa11.17□□□□□ -0.62
RRP1B-202ENST00000470886 PDIA2Q13087 525 aaKnown RBP11.17□□□□□ -0.62
RRP1B-202ENST00000470886 ITPK1Q13572 414 aa11.17□□□□□ -0.62
RRP1B-202ENST00000470886 VPS72Q15906 364 aa11.17□□□□□ -0.62
RRP1B-202ENST00000470886 TMEM270Q6UE05 265 aa11.17□□□□□ -0.62
RRP1B-202ENST00000470886 CCDC117Q8IWD4 279 aaPredicted RBP11.17□□□□□ -0.62
RRP1B-202ENST00000470886 CD302Q8IX05 232 aa11.17□□□□□ -0.62
RRP1B-202ENST00000470886 DHX38Q92620 1227 aaKnown RBP11.17□□□□□ -0.62
RRP1B-202ENST00000470886 HSPBP1Q9NZL4 362 aa11.17□□□□□ -0.62
RRP1B-202ENST00000470886 WDR91A4D1P6 747 aa11.17□□□□□ -0.62
RRP1B-202ENST00000470886 INO80B-WBP1J3KQ70 363 aa11.17□□□□□ -0.62
RRP1B-202ENST00000470886 M0QZ92 97 aa11.17□□□□□ -0.62
RRP1B-202ENST00000470886 PLEKP08567 350 aaPredicted RBP11.17□□□□□ -0.62
RRP1B-202ENST00000470886 GZMAP12544 262 aa11.17□□□□□ -0.62
RRP1B-202ENST00000470886 COILP38432 576 aaPredicted RBP11.17□□□□□ -0.62
RRP1B-202ENST00000470886 SEC24CP53992 1094 aa11.17□□□□□ -0.62
RRP1B-202ENST00000470886 RAD23BP54727 409 aa11.17□□□□□ -0.62
RRP1B-202ENST00000470886 YTHDF3Q7Z739 585 aaKnown RBP11.17□□□□□ -0.62
RRP1B-202ENST00000470886 PRPF38AQ8NAV1 312 aaKnown RBP11.17□□□□□ -0.62
RRP1B-202ENST00000470886 LRRN4CLQ8ND94 238 aa11.17□□□□□ -0.62
RRP1B-202ENST00000470886 C1orf54Q8WWF1 131 aa11.17□□□□□ -0.62
RRP1B-202ENST00000470886 ARHGEF1Q92888 912 aaKnown RBP11.17□□□□□ -0.62
RRP1B-202ENST00000470886 INO80BQ9C086 356 aaPredicted RBP11.17□□□□□ -0.62
RRP1B-202ENST00000470886 PSMC3IPQ9P2W1 217 aaPredicted RBP11.17□□□□□ -0.62
RRP1B-202ENST00000470886 CLDN3O15551 220 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 LPXNO60711 386 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 HIF1AQ16665 826 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 SLC27A3Q5K4L6 730 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 ZNF746Q6NUN9 644 aaPredicted RBP11.16□□□□□ -0.62
RRP1B-202ENST00000470886 ARL8AQ96BM9 186 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 RMDN3Q96TC7 470 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 FRMD8Q9BZ67 464 aaPredicted RBP11.16□□□□□ -0.62
RRP1B-202ENST00000470886 GDF3Q9NR23 364 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 FAF1Q9UNN5 650 aaPredicted RBP11.16□□□□□ -0.62
RRP1B-202ENST00000470886 NPHP3-ACAD11A0A0J9YXS1 232 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 PFDN1O60925 122 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 PPFIA2O75334 1257 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 ENTPD3O75355 529 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 MYBP10242 640 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 ZFXP17010 805 aaPredicted RBP11.16□□□□□ -0.62
RRP1B-202ENST00000470886 PON1P27169 355 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 LLGL1Q15334 1064 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 CYB5D1Q6P9G0 228 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 ZBED8Q8IZ13 594 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 NSUN6Q8TEA1 469 aaKnown RBP11.16□□□□□ -0.62
RRP1B-202ENST00000470886 CFAP36Q96G28 342 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 ZSWIM1Q9BR11 485 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 FAM213AQ9BRX8 229 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 HAUS8Q9BT25 410 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 FRMD8P1Q9BZ68 369 aaPredicted RBP11.16□□□□□ -0.62
RRP1B-202ENST00000470886 SLC38A10Q9HBR0 1119 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 WHRNQ9P202 907 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 FBXO40Q9UH90 709 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 TRIM33Q9UPN9 1127 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 GOLGA8CPA6NN73 597 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 CYP26A1O43174 497 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 SATB1Q01826 763 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms