RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 LCP1P13796 627 aa16.7■□□□□ 0.26
BRAT1-204ENST00000469750 GGCXP38435 758 aa16.7■□□□□ 0.26
BRAT1-204ENST00000469750 ZBED8Q8IZ13 594 aa16.7■□□□□ 0.26
BRAT1-204ENST00000469750 JMJD4Q9H9V9 463 aa16.7■□□□□ 0.26
BRAT1-204ENST00000469750 SPATA31A5Q5VU36 1347 aa16.7■□□□□ 0.26
BRAT1-204ENST00000469750 SPATA31A7Q8IWB4 1347 aa16.7■□□□□ 0.26
BRAT1-204ENST00000469750 CNTNAP5Q8WYK1 1306 aa16.7■□□□□ 0.26
BRAT1-204ENST00000469750 MYMKA6NI61 221 aa16.7■□□□□ 0.26
BRAT1-204ENST00000469750 ATP1A1P05023 1023 aaKnown RBP16.7■□□□□ 0.26
BRAT1-204ENST00000469750 ATXN8OSP0DMR3 200 aa16.7■□□□□ 0.26
BRAT1-204ENST00000469750 SRGNP10124 158 aa16.7■□□□□ 0.26
BRAT1-204ENST00000469750 STMN1P16949 149 aa16.7■□□□□ 0.26
BRAT1-204ENST00000469750 FMO5P49326 533 aa16.7■□□□□ 0.26
BRAT1-204ENST00000469750 ACOT2P49753 483 aa16.7■□□□□ 0.26
BRAT1-204ENST00000469750 FSCBQ5H9T9 825 aa16.7■□□□□ 0.26
BRAT1-204ENST00000469750 ACAD11Q709F0 780 aa16.7■□□□□ 0.26
BRAT1-204ENST00000469750 LRRC43Q8N309 656 aa16.7■□□□□ 0.26
BRAT1-204ENST00000469750 C1orf54Q8WWF1 131 aa16.7■□□□□ 0.26
BRAT1-204ENST00000469750 PARK7Q99497 189 aaKnown RBP16.7■□□□□ 0.26
BRAT1-204ENST00000469750 HACL1Q9UJ83 578 aa16.7■□□□□ 0.26
BRAT1-204ENST00000469750 MAGEB2O15479 319 aa16.7■□□□□ 0.26
BRAT1-204ENST00000469750 RPSAP08865 295 aaKnown RBP16.7■□□□□ 0.26
BRAT1-204ENST00000469750 IZUMO3Q5VZ72 239 aa16.7■□□□□ 0.26
BRAT1-204ENST00000469750 MMS22LQ6ZRQ5 1243 aa16.7■□□□□ 0.26
BRAT1-204ENST00000469750 RAET1EQ8TD07 263 aa16.7■□□□□ 0.26
BRAT1-204ENST00000469750 C18orf8Q96DM3 657 aa16.7■□□□□ 0.26
BRAT1-204ENST00000469750 RNPC3Q96LT9 517 aaKnown RBP16.7■□□□□ 0.26
BRAT1-204ENST00000469750 DYNC1LI2O43237 492 aaPredicted RBP16.7■□□□□ 0.26
BRAT1-204ENST00000469750 TRAPPC3O43617 180 aa16.7■□□□□ 0.26
BRAT1-204ENST00000469750 SSTR3P32745 418 aaPredicted RBP16.7■□□□□ 0.26
BRAT1-204ENST00000469750 EMC2Q15006 297 aa16.7■□□□□ 0.26
BRAT1-204ENST00000469750 PDLIM2Q96JY6 352 aa16.7■□□□□ 0.26
BRAT1-204ENST00000469750 MMTAG2Q9BU76 263 aaKnown RBP16.7■□□□□ 0.26
BRAT1-204ENST00000469750 KATNAL1Q9BW62 490 aa16.7■□□□□ 0.26
BRAT1-204ENST00000469750 GTSE1Q9NYZ3 720 aa16.7■□□□□ 0.26
BRAT1-204ENST00000469750 MOSPD1Q9UJG1 213 aa16.7■□□□□ 0.26
BRAT1-204ENST00000469750 SLC13A4Q9UKG4 626 aa16.7■□□□□ 0.26
BRAT1-204ENST00000469750 CLTCQ00610 1675 aaKnown RBP16.69■□□□□ 0.26
BRAT1-204ENST00000469750 APOL1O14791 398 aa16.69■□□□□ 0.26
BRAT1-204ENST00000469750 RFC5P40937 340 aa16.69■□□□□ 0.26
BRAT1-204ENST00000469750 FMR1Q06787 632 aaKnown RBP eCLIP16.69■□□□□ 0.26
BRAT1-204ENST00000469750 PDIA6Q15084 440 aa16.69■□□□□ 0.26
BRAT1-204ENST00000469750 SLC18A3Q16572 532 aa16.69■□□□□ 0.26
BRAT1-204ENST00000469750 EDRF1Q3B7T1 1238 aa16.69■□□□□ 0.26
BRAT1-204ENST00000469750 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.69■□□□□ 0.26
BRAT1-204ENST00000469750 GTF3C2Q8WUA4 911 aaPredicted RBP16.69■□□□□ 0.26
BRAT1-204ENST00000469750 THOC1Q96FV9 657 aaKnown RBP16.69■□□□□ 0.26
BRAT1-204ENST00000469750 RIT2Q99578 217 aa16.69■□□□□ 0.26
BRAT1-204ENST00000469750 HACD3Q9P035 362 aa16.69■□□□□ 0.26
BRAT1-204ENST00000469750 F5H423 210 aaPredicted RBP16.69■□□□□ 0.26
BRAT1-204ENST00000469750 MAP3K7O43318 606 aa16.69■□□□□ 0.26
BRAT1-204ENST00000469750 MDM2Q00987 491 aaPredicted RBP16.69■□□□□ 0.26
BRAT1-204ENST00000469750 SNRNP35Q16560 246 aaKnown RBP16.69■□□□□ 0.26
BRAT1-204ENST00000469750 CCDC138Q96M89 665 aa16.69■□□□□ 0.26
BRAT1-204ENST00000469750 TRIM15Q9C019 465 aa16.69■□□□□ 0.26
BRAT1-204ENST00000469750 PPP1R12AO14974 1030 aaPredicted RBP16.69■□□□□ 0.26
BRAT1-204ENST00000469750 SLC25A27O95847 323 aa16.69■□□□□ 0.26
BRAT1-204ENST00000469750 PRAMEP78395 509 aa16.69■□□□□ 0.26
BRAT1-204ENST00000469750 STK4Q13043 487 aa16.69■□□□□ 0.26
BRAT1-204ENST00000469750 MXRA8Q9BRK3 442 aa16.69■□□□□ 0.26
BRAT1-204ENST00000469750 WDR35Q9P2L0 1181 aa16.69■□□□□ 0.26
BRAT1-204ENST00000469750 MRFAP1Q9Y605 127 aa16.69■□□□□ 0.26
BRAT1-204ENST00000469750 ESRRGP62508 458 aa16.69■□□□□ 0.26
BRAT1-204ENST00000469750 UVRAGQ9P2Y5 699 aa16.69■□□□□ 0.26
BRAT1-204ENST00000469750 SNX9Q9Y5X1 595 aa16.69■□□□□ 0.26
BRAT1-204ENST00000469750 SSU72P8A0A1W2PR75 194 aa16.68■□□□□ 0.26
BRAT1-204ENST00000469750 MAFGO15525 162 aa16.68■□□□□ 0.26
BRAT1-204ENST00000469750 BRAFP15056 766 aa16.68■□□□□ 0.26
BRAT1-204ENST00000469750 HNRNPH2P55795 449 aaKnown RBP16.68■□□□□ 0.26
BRAT1-204ENST00000469750 MTF1Q14872 753 aa16.68■□□□□ 0.26
BRAT1-204ENST00000469750 EPAS1Q99814 870 aa16.68■□□□□ 0.26
BRAT1-204ENST00000469750 TMEM60Q9H2L4 133 aa16.68■□□□□ 0.26
BRAT1-204ENST00000469750 MYOZ2Q9NPC6 264 aa16.68■□□□□ 0.26
BRAT1-204ENST00000469750 FARP1Q9Y4F1 1045 aaPredicted RBP16.68■□□□□ 0.26
BRAT1-204ENST00000469750 MAGEA9P43362 315 aa16.68■□□□□ 0.26
BRAT1-204ENST00000469750 GMPSP49915 693 aaPredicted RBP16.68■□□□□ 0.26
BRAT1-204ENST00000469750 PPP2R2AP63151 447 aa16.68■□□□□ 0.26
BRAT1-204ENST00000469750 NCOA4Q13772 614 aa16.68■□□□□ 0.26
BRAT1-204ENST00000469750 TMEM132DQ14C87 1099 aa16.68■□□□□ 0.26
BRAT1-204ENST00000469750 R3HDM1Q15032 1099 aaKnown RBP16.68■□□□□ 0.26
BRAT1-204ENST00000469750 KRT80Q6KB66 452 aa16.68■□□□□ 0.26
BRAT1-204ENST00000469750 APPL2Q8NEU8 664 aa16.68■□□□□ 0.26
BRAT1-204ENST00000469750 ASIC4Q96FT7 647 aa16.68■□□□□ 0.26
BRAT1-204ENST00000469750 PIDD1Q9HB75 910 aa16.68■□□□□ 0.26
BRAT1-204ENST00000469750 ITIH6Q6UXX5 1313 aa16.68■□□□□ 0.26
BRAT1-204ENST00000469750 CPS1P31327 1500 aa16.68■□□□□ 0.26
BRAT1-204ENST00000469750 SKIP12755 728 aa16.68■□□□□ 0.26
BRAT1-204ENST00000469750 RPS12P25398 132 aaKnown RBP16.68■□□□□ 0.26
BRAT1-204ENST00000469750 HSD17B4P51659 736 aa16.68■□□□□ 0.26
BRAT1-204ENST00000469750 PRKCEQ02156 737 aa16.68■□□□□ 0.26
BRAT1-204ENST00000469750 RAD51Q06609 339 aa16.68■□□□□ 0.26
BRAT1-204ENST00000469750 SGSM1Q2NKQ1 1148 aa16.68■□□□□ 0.26
BRAT1-204ENST00000469750 KCTD17Q8N5Z5 321 aa16.68■□□□□ 0.26
BRAT1-204ENST00000469750 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.68■□□□□ 0.26
BRAT1-204ENST00000469750 E5RI56 91 aa16.68■□□□□ 0.26
BRAT1-204ENST00000469750 PPFIA2O75334 1257 aa16.68■□□□□ 0.26
BRAT1-204ENST00000469750 UCHL3P15374 230 aa16.68■□□□□ 0.26
BRAT1-204ENST00000469750 POU5F1BQ06416 359 aa16.68■□□□□ 0.26
BRAT1-204ENST00000469750 PID1Q7Z2X4 250 aa16.68■□□□□ 0.26
BRAT1-204ENST00000469750 RASSF3Q86WH2 238 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms