RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 GPRC5CQ9NQ84 441 aa12.11□□□□□ -0.47
COL4A3-204ENST00000469504 MIOSQ9NXC5 875 aa12.11□□□□□ -0.47
COL4A3-204ENST00000469504 IGSF9Q9P2J2 1179 aa12.11□□□□□ -0.47
COL4A3-204ENST00000469504 LRWD1Q9UFC0 647 aa12.11□□□□□ -0.47
COL4A3-204ENST00000469504 PARP2Q9UGN5 583 aa12.11□□□□□ -0.47
COL4A3-204ENST00000469504 KCNG1Q9UIX4 513 aa12.11□□□□□ -0.47
COL4A3-204ENST00000469504 TRIOO75962 3097 aa12.11□□□□□ -0.47
COL4A3-204ENST00000469504 C2CD2LO14523 706 aa12.1□□□□□ -0.47
COL4A3-204ENST00000469504 TADA2AO75478 443 aa12.1□□□□□ -0.47
COL4A3-204ENST00000469504 BRD1O95696 1058 aa12.1□□□□□ -0.47
COL4A3-204ENST00000469504 PRKCBP05771 671 aa12.1□□□□□ -0.47
COL4A3-204ENST00000469504 THP07101 528 aa12.1□□□□□ -0.47
COL4A3-204ENST00000469504 CENPBP07199 599 aaPredicted RBP12.1□□□□□ -0.47
COL4A3-204ENST00000469504 AKAP5P24588 427 aa12.1□□□□□ -0.47
COL4A3-204ENST00000469504 AVPR2P30518 371 aa12.1□□□□□ -0.47
COL4A3-204ENST00000469504 CCT6AP40227 531 aaKnown RBP12.1□□□□□ -0.47
COL4A3-204ENST00000469504 PRPHP41219 470 aa12.1□□□□□ -0.47
COL4A3-204ENST00000469504 MRE11P49959 708 aa12.1□□□□□ -0.47
COL4A3-204ENST00000469504 MAEAQ7L5Y9 396 aa12.1□□□□□ -0.47
COL4A3-204ENST00000469504 ALYREFQ86V81 257 aaKnown RBP12.1□□□□□ -0.47
COL4A3-204ENST00000469504 IGSF22Q8N9C0 903 aa12.1□□□□□ -0.47
COL4A3-204ENST00000469504 TIPINQ9BVW5 301 aa12.1□□□□□ -0.47
COL4A3-204ENST00000469504 CCDC113Q9H0I3 377 aa12.1□□□□□ -0.47
COL4A3-204ENST00000469504 BHMT2Q9H2M3 363 aa12.1□□□□□ -0.47
COL4A3-204ENST00000469504 PDZD7Q9H5P4 517 aa12.1□□□□□ -0.47
COL4A3-204ENST00000469504 WDR6Q9NNW5 1121 aaKnown RBP12.1□□□□□ -0.47
COL4A3-204ENST00000469504 LIMD1Q9UGP4 676 aa12.1□□□□□ -0.47
COL4A3-204ENST00000469504 CDH22Q9UJ99 828 aa12.1□□□□□ -0.47
COL4A3-204ENST00000469504 CCDC195A0A1B0GUA6 201 aa12.09□□□□□ -0.47
COL4A3-204ENST00000469504 ST18O60284 1047 aa12.09□□□□□ -0.47
COL4A3-204ENST00000469504 WEE2P0C1S8 567 aa12.09□□□□□ -0.47
COL4A3-204ENST00000469504 TDGQ13569 410 aa12.09□□□□□ -0.47
COL4A3-204ENST00000469504 KRT79Q5XKE5 535 aa12.09□□□□□ -0.47
COL4A3-204ENST00000469504 RTL10Q7L3V2 364 aa12.09□□□□□ -0.47
COL4A3-204ENST00000469504 TAS1R1Q7RTX1 841 aa12.09□□□□□ -0.47
COL4A3-204ENST00000469504 C4orf32Q8N8J7 132 aa12.09□□□□□ -0.47
COL4A3-204ENST00000469504 PRSS33Q8NF86 280 aa12.09□□□□□ -0.47
COL4A3-204ENST00000469504 DRC1Q96MC2 740 aa12.09□□□□□ -0.47
COL4A3-204ENST00000469504 UROC1Q96N76 676 aa12.09□□□□□ -0.47
COL4A3-204ENST00000469504 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.09□□□□□ -0.47
COL4A3-204ENST00000469504 DNM3Q9UQ16 869 aa12.09□□□□□ -0.47
COL4A3-204ENST00000469504 ZFP37Q9Y6Q3 630 aaPredicted RBP12.09□□□□□ -0.47
COL4A3-204ENST00000469504 CLUHO75153 1309 aa12.09□□□□□ -0.47
COL4A3-204ENST00000469504 TMEM189-UBE2V1I3L0A0 370 aa12.08□□□□□ -0.48
COL4A3-204ENST00000469504 TGM5O43548 720 aa12.08□□□□□ -0.48
COL4A3-204ENST00000469504 RECQL4O94761 1208 aa12.08□□□□□ -0.48
COL4A3-204ENST00000469504 HOXA9P31269 272 aa12.08□□□□□ -0.48
COL4A3-204ENST00000469504 CLCN5P51795 746 aa12.08□□□□□ -0.48
COL4A3-204ENST00000469504 TCF15Q12870 199 aa12.08□□□□□ -0.48
COL4A3-204ENST00000469504 PTGDRQ13258 359 aa12.08□□□□□ -0.48
COL4A3-204ENST00000469504 RABEP1Q15276 862 aa12.08□□□□□ -0.48
COL4A3-204ENST00000469504 RILPL1Q5EBL4 403 aa12.08□□□□□ -0.48
COL4A3-204ENST00000469504 IER5LQ5T953 404 aa12.08□□□□□ -0.48
COL4A3-204ENST00000469504 ATF7IP2Q5U623 682 aa12.08□□□□□ -0.48
COL4A3-204ENST00000469504 LILRA6Q6PI73 481 aa12.08□□□□□ -0.48
COL4A3-204ENST00000469504 CDR2LQ86X02 465 aaPredicted RBP12.08□□□□□ -0.48
COL4A3-204ENST00000469504 SNX29Q8TEQ0 813 aa12.08□□□□□ -0.48
COL4A3-204ENST00000469504 RIN2Q8WYP3 895 aaPredicted RBP12.08□□□□□ -0.48
COL4A3-204ENST00000469504 PIK3R5Q8WYR1 880 aa12.08□□□□□ -0.48
COL4A3-204ENST00000469504 BSNDQ8WZ55 320 aa12.08□□□□□ -0.48
COL4A3-204ENST00000469504 KIF2CQ99661 725 aa12.08□□□□□ -0.48
COL4A3-204ENST00000469504 TTPALQ9BTX7 342 aa12.08□□□□□ -0.48
COL4A3-204ENST00000469504 GPR62Q9BZJ7 368 aa12.08□□□□□ -0.48
COL4A3-204ENST00000469504 TMEM134Q9H6X4 195 aa12.08□□□□□ -0.48
COL4A3-204ENST00000469504 KCNK12Q9HB15 430 aa12.08□□□□□ -0.48
COL4A3-204ENST00000469504 TOPORSQ9NS56 1045 aaPredicted RBP12.08□□□□□ -0.48
COL4A3-204ENST00000469504 SNTG2Q9NY99 539 aa12.08□□□□□ -0.48
COL4A3-204ENST00000469504 KLK14Q9P0G3 267 aa12.08□□□□□ -0.48
COL4A3-204ENST00000469504 EPS15L1Q9UBC2 864 aa12.08□□□□□ -0.48
COL4A3-204ENST00000469504 DUSP12Q9UNI6 340 aa12.08□□□□□ -0.48
COL4A3-204ENST00000469504 KIAA1024Q9UPX6 916 aa12.08□□□□□ -0.48
COL4A3-204ENST00000469504 TNFSF13BQ9Y275 285 aa12.08□□□□□ -0.48
COL4A3-204ENST00000469504 RBM19Q9Y4C8 960 aaKnown RBP12.08□□□□□ -0.48
COL4A3-204ENST00000469504 A0A087WWV3 80 aa12.07□□□□□ -0.48
COL4A3-204ENST00000469504 K7ERI5 159 aa12.07□□□□□ -0.48
COL4A3-204ENST00000469504 PTGESO14684 152 aa12.07□□□□□ -0.48
COL4A3-204ENST00000469504 GALR2O43603 387 aaPredicted RBP12.07□□□□□ -0.48
COL4A3-204ENST00000469504 TRAPPC3O43617 180 aa12.07□□□□□ -0.48
COL4A3-204ENST00000469504 ASGR2P07307 311 aa12.07□□□□□ -0.48
COL4A3-204ENST00000469504 POU2F2P09086 479 aa12.07□□□□□ -0.48
COL4A3-204ENST00000469504 HNRNPA1P09651 372 aaKnown RBP eCLIP12.07□□□□□ -0.48
COL4A3-204ENST00000469504 VCPP55072 806 aaKnown RBP12.07□□□□□ -0.48
COL4A3-204ENST00000469504 DMP1Q13316 513 aaPredicted RBP12.07□□□□□ -0.48
COL4A3-204ENST00000469504 ASTLQ6HA08 431 aaPredicted RBP12.07□□□□□ -0.48
COL4A3-204ENST00000469504 KANK3Q6NY19 840 aa12.07□□□□□ -0.48
COL4A3-204ENST00000469504 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.07□□□□□ -0.48
COL4A3-204ENST00000469504 DTHD1Q6ZMT9 781 aa12.07□□□□□ -0.48
COL4A3-204ENST00000469504 DENND4AQ7Z401 1863 aa12.07□□□□□ -0.48
COL4A3-204ENST00000469504 SMG7Q92540 1137 aaKnown RBP12.07□□□□□ -0.48
COL4A3-204ENST00000469504 PRKD2Q9BZL6 878 aa12.07□□□□□ -0.48
COL4A3-204ENST00000469504 NT5C3AQ9H0P0 336 aa12.07□□□□□ -0.48
COL4A3-204ENST00000469504 MFSD1Q9H3U5 465 aa12.07□□□□□ -0.48
COL4A3-204ENST00000469504 PIDD1Q9HB75 910 aa12.07□□□□□ -0.48
COL4A3-204ENST00000469504 DDX19AQ9NUU7 478 aaKnown RBP12.07□□□□□ -0.48
COL4A3-204ENST00000469504 SLC38A7Q9NVC3 462 aa12.07□□□□□ -0.48
COL4A3-204ENST00000469504 KCND2Q9NZV8 630 aa12.07□□□□□ -0.48
COL4A3-204ENST00000469504 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.07□□□□□ -0.48
COL4A3-204ENST00000469504 CACNA1HO95180 2353 aa12.07□□□□□ -0.48
COL4A3-204ENST00000469504 WDFY4Q6ZS81 3184 aa12.07□□□□□ -0.48
COL4A3-204ENST00000469504 SLC26A4O43511 780 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms