RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 RB1P06400 928 aa12.09□□□□□ -0.47
MSH5-212ENST00000467319 POU3F3P20264 500 aaPredicted RBP12.09□□□□□ -0.47
MSH5-212ENST00000467319 ADSSP30520 456 aa12.09□□□□□ -0.47
MSH5-212ENST00000467319 SCNN1GP51170 649 aa12.09□□□□□ -0.47
MSH5-212ENST00000467319 UBE2HP62256 183 aa12.09□□□□□ -0.47
MSH5-212ENST00000467319 GRIK3Q13003 919 aa12.09□□□□□ -0.47
MSH5-212ENST00000467319 POSTNQ15063 836 aa12.09□□□□□ -0.47
MSH5-212ENST00000467319 NAB2Q15742 525 aa12.09□□□□□ -0.47
MSH5-212ENST00000467319 XKR4Q5GH76 650 aa12.09□□□□□ -0.47
MSH5-212ENST00000467319 KIAA0895Q8NCT3 520 aa12.09□□□□□ -0.47
MSH5-212ENST00000467319 MYLIPQ8WY64 445 aa12.09□□□□□ -0.47
MSH5-212ENST00000467319 BICD1Q96G01 975 aa12.09□□□□□ -0.47
MSH5-212ENST00000467319 SNX27Q96L92 541 aa12.09□□□□□ -0.47
MSH5-212ENST00000467319 C11orf84Q9BUA3 381 aaPredicted RBP12.09□□□□□ -0.47
MSH5-212ENST00000467319 APOL6Q9BWW8 343 aa12.09□□□□□ -0.47
MSH5-212ENST00000467319 CXCL16Q9H2A7 254 aa12.09□□□□□ -0.47
MSH5-212ENST00000467319 SNTG2Q9NY99 539 aa12.09□□□□□ -0.47
MSH5-212ENST00000467319 PCDHB13Q9Y5F0 798 aa12.09□□□□□ -0.47
MSH5-212ENST00000467319 CITO14578 2027 aa12.08□□□□□ -0.48
MSH5-212ENST00000467319 DDHD2O94830 711 aa12.08□□□□□ -0.48
MSH5-212ENST00000467319 RPN1P04843 607 aaKnown RBP12.08□□□□□ -0.48
MSH5-212ENST00000467319 PPM1AP35813 382 aa12.08□□□□□ -0.48
MSH5-212ENST00000467319 PBX3P40426 434 aa12.08□□□□□ -0.48
MSH5-212ENST00000467319 KMT5BQ4FZB7 885 aa12.08□□□□□ -0.48
MSH5-212ENST00000467319 TPRNQ4KMQ1 711 aa12.08□□□□□ -0.48
MSH5-212ENST00000467319 ZBTB41Q5SVQ8 909 aa12.08□□□□□ -0.48
MSH5-212ENST00000467319 KANK3Q6NY19 840 aa12.08□□□□□ -0.48
MSH5-212ENST00000467319 KCNT2Q6UVM3 1135 aa12.08□□□□□ -0.48
MSH5-212ENST00000467319 ALKAL1Q6UXT8 129 aa12.08□□□□□ -0.48
MSH5-212ENST00000467319 STXBP4Q6ZWJ1 553 aa12.08□□□□□ -0.48
MSH5-212ENST00000467319 ZBTB33Q86T24 672 aa12.08□□□□□ -0.48
MSH5-212ENST00000467319 TMEM173Q86WV6 379 aaPredicted RBP12.08□□□□□ -0.48
MSH5-212ENST00000467319 ZNF280BQ86YH2 543 aa12.08□□□□□ -0.48
MSH5-212ENST00000467319 ELOA2Q8IYF1 753 aaPredicted RBP12.08□□□□□ -0.48
MSH5-212ENST00000467319 SLC39A11Q8N1S5 342 aa12.08□□□□□ -0.48
MSH5-212ENST00000467319 SPATA20Q8TB22 786 aa12.08□□□□□ -0.48
MSH5-212ENST00000467319 SCFD1Q8WVM8 642 aa12.08□□□□□ -0.48
MSH5-212ENST00000467319 ZNF558Q96NG5 402 aa12.08□□□□□ -0.48
MSH5-212ENST00000467319 ACCSQ96QU6 501 aa12.08□□□□□ -0.48
MSH5-212ENST00000467319 NRDE2Q9H7Z3 1164 aa12.08□□□□□ -0.48
MSH5-212ENST00000467319 EXOC1Q9NV70 894 aa12.08□□□□□ -0.48
MSH5-212ENST00000467319 CNTN3Q9P232 1028 aa12.08□□□□□ -0.48
MSH5-212ENST00000467319 KANSL3Q9P2N6 904 aa12.08□□□□□ -0.48
MSH5-212ENST00000467319 DNAJB4Q9UDY4 337 aa12.08□□□□□ -0.48
MSH5-212ENST00000467319 EXOC7Q9UPT5 735 aa12.08□□□□□ -0.48
MSH5-212ENST00000467319 STXBP5LQ9Y2K9 1186 aa12.08□□□□□ -0.48
MSH5-212ENST00000467319 GDAQ9Y2T3 454 aa12.08□□□□□ -0.48
MSH5-212ENST00000467319 ANK1P16157 1881 aa12.08□□□□□ -0.48
MSH5-212ENST00000467319 PRRC2BQ5JSZ5 2229 aaKnown RBP12.07□□□□□ -0.48
MSH5-212ENST00000467319 SPTBN5Q9NRC6 3674 aaKnown RBP12.07□□□□□ -0.48
MSH5-212ENST00000467319 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.07□□□□□ -0.48
MSH5-212ENST00000467319 CARNS1A5YM72 827 aa12.07□□□□□ -0.48
MSH5-212ENST00000467319 RFXAPO00287 272 aa12.07□□□□□ -0.48
MSH5-212ENST00000467319 OGTO15294 1046 aa12.07□□□□□ -0.48
MSH5-212ENST00000467319 ZC3H11AO75152 810 aaKnown RBP eCLIP12.07□□□□□ -0.48
MSH5-212ENST00000467319 PRPF6O94906 941 aaKnown RBP12.07□□□□□ -0.48
MSH5-212ENST00000467319 RHOBTB3O94955 611 aa12.07□□□□□ -0.48
MSH5-212ENST00000467319 POMCP01189 267 aa12.07□□□□□ -0.48
MSH5-212ENST00000467319 ITGB1P05556 798 aa12.07□□□□□ -0.48
MSH5-212ENST00000467319 ADRB2P07550 413 aa12.07□□□□□ -0.48
MSH5-212ENST00000467319 CLTAP09496 248 aa12.07□□□□□ -0.48
MSH5-212ENST00000467319 HARSP12081 509 aaKnown RBP12.07□□□□□ -0.48
MSH5-212ENST00000467319 KCNE1P15382 129 aa12.07□□□□□ -0.48
MSH5-212ENST00000467319 SLC11A1P49279 550 aa12.07□□□□□ -0.48
MSH5-212ENST00000467319 BCAR1P56945 870 aa12.07□□□□□ -0.48
MSH5-212ENST00000467319 MYO9BQ13459 2157 aa12.07□□□□□ -0.48
MSH5-212ENST00000467319 CAMK1Q14012 370 aa12.07□□□□□ -0.48
MSH5-212ENST00000467319 KCNB1Q14721 858 aa12.07□□□□□ -0.48
MSH5-212ENST00000467319 KYAT1Q16773 422 aa12.07□□□□□ -0.48
MSH5-212ENST00000467319 COLGALT2Q8IYK4 626 aa12.07□□□□□ -0.48
MSH5-212ENST00000467319 KLHL23Q8NBE8 558 aa12.07□□□□□ -0.48
MSH5-212ENST00000467319 ZNF507Q8TCN5 953 aa12.07□□□□□ -0.48
MSH5-212ENST00000467319 BCL7CQ8WUZ0 217 aaPredicted RBP12.07□□□□□ -0.48
MSH5-212ENST00000467319 PPP1R10Q96QC0 940 aaKnown RBP12.07□□□□□ -0.48
MSH5-212ENST00000467319 RPS6KC1Q96S38 1066 aa12.07□□□□□ -0.48
MSH5-212ENST00000467319 TMEM175Q9BSA9 504 aa12.07□□□□□ -0.48
MSH5-212ENST00000467319 TCHPQ9BT92 498 aa12.07□□□□□ -0.48
MSH5-212ENST00000467319 CCDC94Q9BW85 323 aaPredicted RBP12.07□□□□□ -0.48
MSH5-212ENST00000467319 LMAN2LQ9H0V9 348 aa12.07□□□□□ -0.48
MSH5-212ENST00000467319 TMEM206Q9H813 350 aa12.07□□□□□ -0.48
MSH5-212ENST00000467319 AAASQ9NRG9 546 aa12.07□□□□□ -0.48
MSH5-212ENST00000467319 TOPORSQ9NS56 1045 aaPredicted RBP12.07□□□□□ -0.48
MSH5-212ENST00000467319 MIOSQ9NXC5 875 aa12.07□□□□□ -0.48
MSH5-212ENST00000467319 KLK14Q9P0G3 267 aa12.07□□□□□ -0.48
MSH5-212ENST00000467319 PARP2Q9UGN5 583 aa12.07□□□□□ -0.48
MSH5-212ENST00000467319 TTC26A0AVF1 554 aa12.06□□□□□ -0.48
MSH5-212ENST00000467319 GRM6O15303 877 aa12.06□□□□□ -0.48
MSH5-212ENST00000467319 TGFB1I1O43294 461 aa12.06□□□□□ -0.48
MSH5-212ENST00000467319 KINO60870 393 aaKnown RBP12.06□□□□□ -0.48
MSH5-212ENST00000467319 FGF18O76093 207 aa12.06□□□□□ -0.48
MSH5-212ENST00000467319 EFEMP2O95967 443 aa12.06□□□□□ -0.48
MSH5-212ENST00000467319 GALTP07902 379 aa12.06□□□□□ -0.48
MSH5-212ENST00000467319 CXCL8P10145 99 aa12.06□□□□□ -0.48
MSH5-212ENST00000467319 FOSL2P15408 326 aa12.06□□□□□ -0.48
MSH5-212ENST00000467319 GARTP22102 1010 aa12.06□□□□□ -0.48
MSH5-212ENST00000467319 DNAJB1P25685 340 aa12.06□□□□□ -0.48
MSH5-212ENST00000467319 TNFSF9P41273 254 aa12.06□□□□□ -0.48
MSH5-212ENST00000467319 PLCB3Q01970 1234 aa12.06□□□□□ -0.48
MSH5-212ENST00000467319 UBE3AQ05086 875 aa12.06□□□□□ -0.48
MSH5-212ENST00000467319 RNASELQ05823 741 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms