RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 SESN3P58005 492 aa4.32□□□□□ -1.72
GTF3C3-209ENST00000466862 TAP1Q03518 808 aa4.32□□□□□ -1.72
GTF3C3-209ENST00000466862 AGAP9Q5VTM2 703 aa4.32□□□□□ -1.72
GTF3C3-209ENST00000466862 Q6ZVL8 140 aa4.32□□□□□ -1.72
GTF3C3-209ENST00000466862 ZNF572Q7Z3I7 529 aaPredicted RBP4.32□□□□□ -1.72
GTF3C3-209ENST00000466862 ASB10Q8WXI3 467 aa4.32□□□□□ -1.72
GTF3C3-209ENST00000466862 ACAP3Q96P50 834 aa4.32□□□□□ -1.72
GTF3C3-209ENST00000466862 IFT22Q9H7X7 185 aa4.32□□□□□ -1.72
GTF3C3-209ENST00000466862 EDARQ9UNE0 448 aa4.32□□□□□ -1.72
GTF3C3-209ENST00000466862 HDAC5Q9UQL6 1122 aa4.32□□□□□ -1.72
GTF3C3-209ENST00000466862 NOC2LQ9Y3T9 749 aaKnown RBP4.32□□□□□ -1.72
GTF3C3-209ENST00000466862 EPN1Q9Y6I3 576 aaPredicted RBP4.32□□□□□ -1.72
GTF3C3-209ENST00000466862 RPTORQ8N122 1335 aa4.31□□□□□ -1.72
GTF3C3-209ENST00000466862 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.31□□□□□ -1.72
GTF3C3-209ENST00000466862 CXorf49A8MYA2 514 aaPredicted RBP4.31□□□□□ -1.72
GTF3C3-209ENST00000466862 SPDEFO95238 335 aa4.31□□□□□ -1.72
GTF3C3-209ENST00000466862 ALOX15P16050 662 aaPredicted RBP4.31□□□□□ -1.72
GTF3C3-209ENST00000466862 MGAT1P26572 445 aa4.31□□□□□ -1.72
GTF3C3-209ENST00000466862 CANXP27824 592 aaKnown RBP4.31□□□□□ -1.72
GTF3C3-209ENST00000466862 FOXI1Q12951 378 aa4.31□□□□□ -1.72
GTF3C3-209ENST00000466862 TP53BP2Q13625 1128 aa4.31□□□□□ -1.72
GTF3C3-209ENST00000466862 UGT8Q16880 541 aa4.31□□□□□ -1.72
GTF3C3-209ENST00000466862 DPY19L2P1Q6NXN4 242 aa4.31□□□□□ -1.72
GTF3C3-209ENST00000466862 OLFML1Q6UWY5 402 aa4.31□□□□□ -1.72
GTF3C3-209ENST00000466862 KCNK18Q7Z418 384 aa4.31□□□□□ -1.72
GTF3C3-209ENST00000466862 STRA8Q7Z7C7 330 aa4.31□□□□□ -1.72
GTF3C3-209ENST00000466862 CPEB3Q8NE35 698 aaKnown RBP4.31□□□□□ -1.72
GTF3C3-209ENST00000466862 REPS2Q8NFH8 660 aa4.31□□□□□ -1.72
GTF3C3-209ENST00000466862 TFAP2CQ92754 450 aa4.31□□□□□ -1.72
GTF3C3-209ENST00000466862 FUBP1Q96AE4 644 aaKnown RBP4.31□□□□□ -1.72
GTF3C3-209ENST00000466862 PAWRQ96IZ0 340 aaKnown RBP4.31□□□□□ -1.72
GTF3C3-209ENST00000466862 COQ10AQ96MF6 247 aa4.31□□□□□ -1.72
GTF3C3-209ENST00000466862 FAM193BQ96PV7 902 aaPredicted RBP4.31□□□□□ -1.72
GTF3C3-209ENST00000466862 SPON1Q9HCB6 807 aa4.31□□□□□ -1.72
GTF3C3-209ENST00000466862 DPP7Q9UHL4 492 aa4.31□□□□□ -1.72
GTF3C3-209ENST00000466862 PNPLA7Q6ZV29 1317 aa4.3□□□□□ -1.72
GTF3C3-209ENST00000466862 PIPSLA2A3N6 862 aa4.3□□□□□ -1.72
GTF3C3-209ENST00000466862 UNC119BA6NIH7 251 aa4.3□□□□□ -1.72
GTF3C3-209ENST00000466862 ZAR1LA6NP61 321 aa4.3□□□□□ -1.72
GTF3C3-209ENST00000466862 ZEB2O60315 1214 aa4.3□□□□□ -1.72
GTF3C3-209ENST00000466862 RAB11FIP3O75154 756 aa4.3□□□□□ -1.72
GTF3C3-209ENST00000466862 ULK1O75385 1050 aa4.3□□□□□ -1.72
GTF3C3-209ENST00000466862 NDUFA10O95299 355 aa4.3□□□□□ -1.72
GTF3C3-209ENST00000466862 CFIP05156 583 aa4.3□□□□□ -1.72
GTF3C3-209ENST00000466862 ELANEP08246 267 aa4.3□□□□□ -1.72
GTF3C3-209ENST00000466862 RBP3P10745 1247 aa4.3□□□□□ -1.72
GTF3C3-209ENST00000466862 DDX6P26196 483 aaKnown RBP eCLIP4.3□□□□□ -1.72
GTF3C3-209ENST00000466862 GUCY1A2P33402 732 aa4.3□□□□□ -1.72
GTF3C3-209ENST00000466862 SEC24CP53992 1094 aa4.3□□□□□ -1.72
GTF3C3-209ENST00000466862 MRPS9P82933 396 aaKnown RBP4.3□□□□□ -1.72
GTF3C3-209ENST00000466862 PPP3CAQ08209 521 aa4.3□□□□□ -1.72
GTF3C3-209ENST00000466862 ADRM1Q16186 407 aa4.3□□□□□ -1.72
GTF3C3-209ENST00000466862 EFCAB12Q6NXP0 572 aa4.3□□□□□ -1.72
GTF3C3-209ENST00000466862 HDGFL2Q7Z4V5 671 aaPredicted RBP4.3□□□□□ -1.72
GTF3C3-209ENST00000466862 RHOT2Q8IXI1 618 aa4.3□□□□□ -1.72
GTF3C3-209ENST00000466862 CMIPQ8IY22 773 aa4.3□□□□□ -1.72
GTF3C3-209ENST00000466862 AFAP1L2Q8N4X5 818 aa4.3□□□□□ -1.72
GTF3C3-209ENST00000466862 OR7D4Q8NG98 312 aa4.3□□□□□ -1.72
GTF3C3-209ENST00000466862 USP7Q93009 1102 aa4.3□□□□□ -1.72
GTF3C3-209ENST00000466862 R3HDMLQ9H3Y0 253 aa4.3□□□□□ -1.72
GTF3C3-209ENST00000466862 PHF2O75151 1096 aa4.29□□□□□ -1.72
GTF3C3-209ENST00000466862 NUDT3O95989 172 aa4.29□□□□□ -1.72
GTF3C3-209ENST00000466862 SPATA31D3P0C874 917 aa4.29□□□□□ -1.72
GTF3C3-209ENST00000466862 EGR2P11161 476 aaPredicted RBP4.29□□□□□ -1.72
GTF3C3-209ENST00000466862 SREBF1P36956 1147 aa4.29□□□□□ -1.72
GTF3C3-209ENST00000466862 CHN2P52757 468 aa4.29□□□□□ -1.72
GTF3C3-209ENST00000466862 MUM1Q2TAK8 710 aa4.29□□□□□ -1.72
GTF3C3-209ENST00000466862 FAM47AQ5JRC9 791 aa4.29□□□□□ -1.72
GTF3C3-209ENST00000466862 COLEC12Q5KU26 742 aa4.29□□□□□ -1.72
GTF3C3-209ENST00000466862 SPATA31D4Q6ZUB0 917 aa4.29□□□□□ -1.72
GTF3C3-209ENST00000466862 PDZD4Q76G19 769 aaPredicted RBP4.29□□□□□ -1.72
GTF3C3-209ENST00000466862 FAM98AQ8NCA5 519 aaKnown RBP4.29□□□□□ -1.72
GTF3C3-209ENST00000466862 LMBR1Q8WVP7 490 aa4.29□□□□□ -1.72
GTF3C3-209ENST00000466862 RIN2Q8WYP3 895 aaPredicted RBP4.29□□□□□ -1.72
GTF3C3-209ENST00000466862 RAX2Q96IS3 184 aa4.29□□□□□ -1.72
GTF3C3-209ENST00000466862 TTC1Q99614 292 aa4.29□□□□□ -1.72
GTF3C3-209ENST00000466862 BCO1Q9HAY6 547 aa4.29□□□□□ -1.72
GTF3C3-209ENST00000466862 VTA1Q9NP79 307 aa4.29□□□□□ -1.72
GTF3C3-209ENST00000466862 KLHL11Q9NVR0 708 aa4.29□□□□□ -1.72
GTF3C3-209ENST00000466862 USP15Q9Y4E8 981 aaPredicted RBP4.29□□□□□ -1.72
GTF3C3-209ENST00000466862 FPGT-TNNI3KV9GXZ4 949 aa4.29□□□□□ -1.72
GTF3C3-209ENST00000466862 POLR2AP24928 1970 aaKnown RBP4.28□□□□□ -1.72
GTF3C3-209ENST00000466862 CCDC78A2IDD5 438 aa4.28□□□□□ -1.72
GTF3C3-209ENST00000466862 DRGXA6NNA5 263 aa4.28□□□□□ -1.72
GTF3C3-209ENST00000466862 GYS2P54840 703 aa4.28□□□□□ -1.72
GTF3C3-209ENST00000466862 CLRN1P58418 232 aa4.28□□□□□ -1.72
GTF3C3-209ENST00000466862 GUCY1B3Q02153 619 aa4.28□□□□□ -1.72
GTF3C3-209ENST00000466862 OCA2Q04671 838 aa4.28□□□□□ -1.72
GTF3C3-209ENST00000466862 SP140Q13342 867 aa4.28□□□□□ -1.72
GTF3C3-209ENST00000466862 CCDC142Q17RM4 750 aa4.28□□□□□ -1.72
GTF3C3-209ENST00000466862 PRR16Q569H4 304 aa4.28□□□□□ -1.72
GTF3C3-209ENST00000466862 ATXN7L2Q5T6C5 722 aaPredicted RBP4.28□□□□□ -1.72
GTF3C3-209ENST00000466862 B3GNTL1Q67FW5 361 aaPredicted RBP4.28□□□□□ -1.72
GTF3C3-209ENST00000466862 ADGRG3Q86Y34 549 aa4.28□□□□□ -1.72
GTF3C3-209ENST00000466862 OR56A1Q8NGH5 318 aa4.28□□□□□ -1.72
GTF3C3-209ENST00000466862 ZFP28Q8NHY6 868 aa4.28□□□□□ -1.72
GTF3C3-209ENST00000466862 AUTS2Q8WXX7 1259 aa4.28□□□□□ -1.72
GTF3C3-209ENST00000466862 QRSL1Q9H0R6 528 aaKnown RBP4.28□□□□□ -1.72
GTF3C3-209ENST00000466862 CYP4F11Q9HBI6 524 aa4.28□□□□□ -1.72
GTF3C3-209ENST00000466862 DMRT3Q9NQL9 472 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms