RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 KIFAP3Q92845 792 aa7.67□□□□□ -1.18
CLDN4-204ENST00000466411 DYDC2Q96IM9 177 aa7.67□□□□□ -1.18
CLDN4-204ENST00000466411 CEP170P1Q96L14 293 aa7.67□□□□□ -1.18
CLDN4-204ENST00000466411 GBP4Q96PP9 640 aa7.67□□□□□ -1.18
CLDN4-204ENST00000466411 PCYT2Q99447 389 aa7.67□□□□□ -1.18
CLDN4-204ENST00000466411 MTRQ99707 1265 aa7.67□□□□□ -1.18
CLDN4-204ENST00000466411 ERVK-5Q9HDB9 667 aa7.67□□□□□ -1.18
CLDN4-204ENST00000466411 PARD6AQ9NPB6 346 aa7.67□□□□□ -1.18
CLDN4-204ENST00000466411 HOOK1Q9UJC3 728 aaKnown RBP7.67□□□□□ -1.18
CLDN4-204ENST00000466411 FBXO2Q9UK22 296 aaPredicted RBP7.67□□□□□ -1.18
CLDN4-204ENST00000466411 RCOR1Q9UKL0 485 aa7.67□□□□□ -1.18
CLDN4-204ENST00000466411 RWDD3Q9Y3V2 267 aa7.67□□□□□ -1.18
CLDN4-204ENST00000466411 CLIC4Q9Y696 253 aa7.67□□□□□ -1.18
CLDN4-204ENST00000466411 TCHHQ07283 1943 aa7.67□□□□□ -1.18
CLDN4-204ENST00000466411 MYH11P35749 1972 aa7.67□□□□□ -1.18
CLDN4-204ENST00000466411 IGKV6-21A0A0C4DH24 114 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 A0A1W2PQ27 194 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 A0A1W2PQ64 194 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 A0A1W2PQD8 194 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 EML1O00423 815 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 WNT7AO00755 349 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 PER2O15055 1255 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 ZNF862O60290 1169 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 DTNBO60941 627 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 CSPG5O95196 566 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 C22orf31O95567 290 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 KLRC1P26715 233 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 RARRES1P49788 294 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 CEBPZQ03701 1054 aaKnown RBP7.66□□□□□ -1.18
CLDN4-204ENST00000466411 RING1Q06587 406 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 HSP90AA2PQ14568 343 aaPredicted RBP7.66□□□□□ -1.18
CLDN4-204ENST00000466411 EMC2Q15006 297 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 TARBP2Q15633 366 aaKnown RBP7.66□□□□□ -1.18
CLDN4-204ENST00000466411 DUSP6Q16828 381 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 MTERF2Q49AM1 385 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 TMEM259Q4ZIN3 620 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 NAALADL2Q58DX5 795 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 XKR9Q5GH70 373 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 FAM26DQ5JW98 314 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 ANKRD54Q6NXT1 300 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 KANK3Q6NY19 840 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 ZC3H14Q6PJT7 736 aaKnown RBP7.66□□□□□ -1.18
CLDN4-204ENST00000466411 ANO5Q75V66 913 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 APBB1IPQ7Z5R6 666 aaPredicted RBP7.66□□□□□ -1.18
CLDN4-204ENST00000466411 ZDHHC14Q8IZN3 488 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 METTL13Q8N6R0 699 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 PSPC1Q8WXF1 523 aaKnown RBP7.66□□□□□ -1.18
CLDN4-204ENST00000466411 LARP4BQ92615 738 aaKnown RBP7.66□□□□□ -1.18
CLDN4-204ENST00000466411 PPP2R3CQ969Q6 453 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 IFT74Q96LB3 600 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 FTHL17Q9BXU8 183 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 NFKBIZQ9BYH8 718 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 IFIH1Q9BYX4 1025 aaKnown RBP7.66□□□□□ -1.18
CLDN4-204ENST00000466411 GTPBP4Q9BZE4 634 aaKnown RBP7.66□□□□□ -1.18
CLDN4-204ENST00000466411 C2orf40Q9H1Z8 148 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 POMKQ9H5K3 350 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 DHX33Q9H6R0 707 aaKnown RBP7.66□□□□□ -1.18
CLDN4-204ENST00000466411 BCAS3Q9H6U6 928 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 DDX19AQ9NUU7 478 aaKnown RBP7.66□□□□□ -1.18
CLDN4-204ENST00000466411 SETD4Q9NVD3 440 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 TSR3Q9UJK0 312 aaKnown RBP7.66□□□□□ -1.18
CLDN4-204ENST00000466411 ODF2LQ9ULJ1 636 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 NR2E1Q9Y466 385 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 ADGRA3Q8IWK6 1321 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 EVPLQ92817 2033 aa7.66□□□□□ -1.18
CLDN4-204ENST00000466411 CARNS1A5YM72 827 aa7.65□□□□□ -1.18
CLDN4-204ENST00000466411 RSPH10B2B2RC85 870 aa7.65□□□□□ -1.18
CLDN4-204ENST00000466411 C1QTNF9BB2RNN3 333 aa7.65□□□□□ -1.18
CLDN4-204ENST00000466411 TREHO43280 583 aa7.65□□□□□ -1.18
CLDN4-204ENST00000466411 C1QTNF9P0C862 333 aa7.65□□□□□ -1.18
CLDN4-204ENST00000466411 RSPH10BP0C881 870 aa7.65□□□□□ -1.18
CLDN4-204ENST00000466411 SPATA31C1P0DKV0 1188 aa7.65□□□□□ -1.18
CLDN4-204ENST00000466411 PTMSP20962 102 aa7.65□□□□□ -1.18
CLDN4-204ENST00000466411 SFPQP23246 707 aaKnown RBP eCLIP7.65□□□□□ -1.18
CLDN4-204ENST00000466411 CMA1P23946 247 aa7.65□□□□□ -1.18
CLDN4-204ENST00000466411 GUCY2CP25092 1073 aa7.65□□□□□ -1.18
CLDN4-204ENST00000466411 MARCKSP29966 332 aaPredicted RBP7.65□□□□□ -1.18
CLDN4-204ENST00000466411 THPOP40225 353 aa7.65□□□□□ -1.18
CLDN4-204ENST00000466411 STAT6P42226 847 aa7.65□□□□□ -1.18
CLDN4-204ENST00000466411 PHKA2P46019 1235 aa7.65□□□□□ -1.18
CLDN4-204ENST00000466411 EFNA5P52803 228 aa7.65□□□□□ -1.18
CLDN4-204ENST00000466411 SMTNP53814 917 aa7.65□□□□□ -1.18
CLDN4-204ENST00000466411 IGBP1P78318 339 aa7.65□□□□□ -1.18
CLDN4-204ENST00000466411 MRPS6P82932 125 aaKnown RBP7.65□□□□□ -1.18
CLDN4-204ENST00000466411 DNM1Q05193 864 aaKnown RBP7.65□□□□□ -1.18
CLDN4-204ENST00000466411 CTTNQ14247 550 aaKnown RBP7.65□□□□□ -1.18
CLDN4-204ENST00000466411 UGCGQ16739 394 aa7.65□□□□□ -1.18
CLDN4-204ENST00000466411 TMEM119Q4V9L6 283 aa7.65□□□□□ -1.18
CLDN4-204ENST00000466411 SOWAHCQ53LP3 525 aaPredicted RBP7.65□□□□□ -1.18
CLDN4-204ENST00000466411 N4BP2L1Q5TBK1 243 aaPredicted RBP7.65□□□□□ -1.18
CLDN4-204ENST00000466411 RRAGBQ5VZM2 374 aa7.65□□□□□ -1.18
CLDN4-204ENST00000466411 EFCAB12Q6NXP0 572 aa7.65□□□□□ -1.18
CLDN4-204ENST00000466411 STXBP4Q6ZWJ1 553 aa7.65□□□□□ -1.18
CLDN4-204ENST00000466411 KLHL23Q8NBE8 558 aa7.65□□□□□ -1.18
CLDN4-204ENST00000466411 LEO1Q8WVC0 666 aaPredicted RBP7.65□□□□□ -1.18
CLDN4-204ENST00000466411 POF1BQ8WVV4 589 aa7.65□□□□□ -1.18
CLDN4-204ENST00000466411 POM121Q96HA1 1249 aa7.65□□□□□ -1.18
CLDN4-204ENST00000466411 SCLT1Q96NL6 688 aa7.65□□□□□ -1.18
CLDN4-204ENST00000466411 CSRNP2Q9H175 543 aa7.65□□□□□ -1.18
CLDN4-204ENST00000466411 TNMDQ9H2S6 317 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms