RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 MCL1Q07820 350 aa7.85□□□□□ -1.15
PTCD3-205ENST00000464541 LCE1DQ5T752 114 aa7.85□□□□□ -1.15
PTCD3-205ENST00000464541 PPP4R3AQ6IN85 833 aa7.85□□□□□ -1.15
PTCD3-205ENST00000464541 DRICH1Q6PGQ1 229 aaPredicted RBP7.85□□□□□ -1.15
PTCD3-205ENST00000464541 MIER2Q8N344 545 aa7.85□□□□□ -1.15
PTCD3-205ENST00000464541 OR2I1PQ8NGU4 316 aa7.85□□□□□ -1.15
PTCD3-205ENST00000464541 ATXN2LQ8WWM7 1075 aaKnown RBP7.85□□□□□ -1.15
PTCD3-205ENST00000464541 LSM14BQ9BX40 385 aaKnown RBP7.85□□□□□ -1.15
PTCD3-205ENST00000464541 SENP6Q9GZR1 1112 aaPredicted RBP7.85□□□□□ -1.15
PTCD3-205ENST00000464541 AASDHPPTQ9NRN7 309 aa7.85□□□□□ -1.15
PTCD3-205ENST00000464541 SIK3Q9Y2K2 1263 aa7.85□□□□□ -1.15
PTCD3-205ENST00000464541 LUC7L2Q9Y383 392 aaKnown RBP7.85□□□□□ -1.15
PTCD3-205ENST00000464541 IPPQ9Y573 584 aa7.85□□□□□ -1.15
PTCD3-205ENST00000464541 ATRNL1Q5VV63 1379 aa7.84□□□□□ -1.15
PTCD3-205ENST00000464541 ZRANB2O95218 330 aaKnown RBP eCLIP7.84□□□□□ -1.159e-6■□□□□ 10.3
PTCD3-205ENST00000464541 RPLP2P05387 115 aaKnown RBP7.84□□□□□ -1.15
PTCD3-205ENST00000464541 SNRPA1P09661 255 aaKnown RBP7.84□□□□□ -1.15
PTCD3-205ENST00000464541 BUD31P41223 144 aaPredicted RBP7.84□□□□□ -1.15
PTCD3-205ENST00000464541 CRHR2Q13324 411 aa7.84□□□□□ -1.15
PTCD3-205ENST00000464541 CNGB1Q14028 1251 aaPredicted RBP7.84□□□□□ -1.15
PTCD3-205ENST00000464541 PLEKHG6Q3KR16 790 aa7.84□□□□□ -1.15
PTCD3-205ENST00000464541 MFSD14BQ5SR56 506 aa7.84□□□□□ -1.15
PTCD3-205ENST00000464541 PALM2Q8IXS6 379 aa7.84□□□□□ -1.15
PTCD3-205ENST00000464541 HOOK2Q96ED9 719 aa7.84□□□□□ -1.15
PTCD3-205ENST00000464541 CEP95Q96GE4 821 aa7.84□□□□□ -1.15
PTCD3-205ENST00000464541 GPR87Q9BY21 358 aa7.84□□□□□ -1.15
PTCD3-205ENST00000464541 ZNF703Q9H7S9 590 aaPredicted RBP7.84□□□□□ -1.15
PTCD3-205ENST00000464541 KLRG2A4D1S0 409 aaPredicted RBP7.83□□□□□ -1.16
PTCD3-205ENST00000464541 TBKBP1A7MCY6 615 aa7.83□□□□□ -1.16
PTCD3-205ENST00000464541 HTRA2O43464 458 aaPredicted RBP7.83□□□□□ -1.16
PTCD3-205ENST00000464541 ABLIM3O94929 683 aa7.83□□□□□ -1.16
PTCD3-205ENST00000464541 MGAT1P26572 445 aa7.83□□□□□ -1.16
PTCD3-205ENST00000464541 PIN1Q13526 163 aaPredicted RBP7.83□□□□□ -1.16
PTCD3-205ENST00000464541 RRP1BQ14684 758 aaKnown RBP7.83□□□□□ -1.16
PTCD3-205ENST00000464541 VPS72Q15906 364 aa7.83□□□□□ -1.16
PTCD3-205ENST00000464541 BMT2Q1RMZ1 405 aa7.83□□□□□ -1.16
PTCD3-205ENST00000464541 RRP12Q5JTH9 1297 aaKnown RBP7.83□□□□□ -1.16
PTCD3-205ENST00000464541 SPDYAQ5MJ70 313 aa7.83□□□□□ -1.16
PTCD3-205ENST00000464541 ODR4Q5SWX8 454 aa7.83□□□□□ -1.16
PTCD3-205ENST00000464541 C1QL3Q5VWW1 255 aa7.83□□□□□ -1.16
PTCD3-205ENST00000464541 TMPRSS6Q8IU80 811 aa7.83□□□□□ -1.16
PTCD3-205ENST00000464541 MB21D1Q8N884 522 aa7.83□□□□□ -1.16
PTCD3-205ENST00000464541 REPS2Q8NFH8 660 aa7.83□□□□□ -1.16
PTCD3-205ENST00000464541 ZFP28Q8NHY6 868 aa7.83□□□□□ -1.16
PTCD3-205ENST00000464541 DPF2Q92785 391 aa7.83□□□□□ -1.16
PTCD3-205ENST00000464541 MNTQ99583 582 aa7.83□□□□□ -1.16
PTCD3-205ENST00000464541 KCNH6Q9H252 994 aa7.83□□□□□ -1.16
PTCD3-205ENST00000464541 MYRFQ9Y2G1 1151 aa7.83□□□□□ -1.16
PTCD3-205ENST00000464541 ANKRD6Q9Y2G4 727 aa7.83□□□□□ -1.16
PTCD3-205ENST00000464541 CFAP20Q9Y6A4 193 aaKnown RBP7.83□□□□□ -1.16
PTCD3-205ENST00000464541 GPR32O75388 356 aa7.82□□□□□ -1.16
PTCD3-205ENST00000464541 S100BP04271 92 aaPredicted RBP7.82□□□□□ -1.16
PTCD3-205ENST00000464541 AKAP5P24588 427 aa7.82□□□□□ -1.16
PTCD3-205ENST00000464541 CLRN1P58418 232 aa7.82□□□□□ -1.16
PTCD3-205ENST00000464541 CDC42EP1Q00587 391 aa7.82□□□□□ -1.16
PTCD3-205ENST00000464541 UAP1L1Q3KQV9 507 aa7.82□□□□□ -1.16
PTCD3-205ENST00000464541 OTUD7BQ6GQQ9 843 aa7.82□□□□□ -1.16
PTCD3-205ENST00000464541 Q6ZRM9 215 aa7.82□□□□□ -1.16
PTCD3-205ENST00000464541 HSPBAP1Q96EW2 488 aa7.82□□□□□ -1.16
PTCD3-205ENST00000464541 CPEB1Q9BZB8 566 aaKnown RBP7.82□□□□□ -1.16
PTCD3-205ENST00000464541 FAM30AQ9NZY2 134 aa7.82□□□□□ -1.16
PTCD3-205ENST00000464541 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.82□□□□□ -1.16
PTCD3-205ENST00000464541 AJAP1Q9UKB5 411 aaPredicted RBP7.82□□□□□ -1.16
PTCD3-205ENST00000464541 LIMCH1Q9UPQ0 1083 aa7.82□□□□□ -1.16
PTCD3-205ENST00000464541 CCDC154A6NI56 674 aa7.81□□□□□ -1.16
PTCD3-205ENST00000464541 CXorf49A8MYA2 514 aaPredicted RBP7.81□□□□□ -1.16
PTCD3-205ENST00000464541 DTNBO60941 627 aa7.81□□□□□ -1.16
PTCD3-205ENST00000464541 EDNRBP24530 442 aa7.81□□□□□ -1.16
PTCD3-205ENST00000464541 SCNN1GP51170 649 aa7.81□□□□□ -1.16
PTCD3-205ENST00000464541 EFCAB12Q6NXP0 572 aa7.81□□□□□ -1.16
PTCD3-205ENST00000464541 RNF207Q6ZRF8 634 aa7.81□□□□□ -1.16
PTCD3-205ENST00000464541 RHOT1Q8IXI2 618 aa7.81□□□□□ -1.16
PTCD3-205ENST00000464541 DRC7Q8IY82 874 aa7.81□□□□□ -1.16
PTCD3-205ENST00000464541 TDP1Q9NUW8 608 aa7.81□□□□□ -1.16
PTCD3-205ENST00000464541 XDHP47989 1333 aa7.8□□□□□ -1.16
PTCD3-205ENST00000464541 IL33O95760 270 aa7.8□□□□□ -1.16
PTCD3-205ENST00000464541 ATP8B2P98198 1209 aa7.8□□□□□ -1.16
PTCD3-205ENST00000464541 MTM1Q13496 603 aa7.8□□□□□ -1.16
PTCD3-205ENST00000464541 ATP2B3Q16720 1220 aa7.8□□□□□ -1.16
PTCD3-205ENST00000464541 USP39Q53GS9 565 aaKnown RBP7.8□□□□□ -1.16
PTCD3-205ENST00000464541 AFMIDQ63HM1 303 aa7.8□□□□□ -1.16
PTCD3-205ENST00000464541 XYLT1Q86Y38 959 aa7.8□□□□□ -1.16
PTCD3-205ENST00000464541 TFAP2CQ92754 450 aa7.8□□□□□ -1.16
PTCD3-205ENST00000464541 PARPBPQ9NWS1 579 aa7.8□□□□□ -1.16
PTCD3-205ENST00000464541 SERPINB13Q9UIV8 391 aa7.8□□□□□ -1.16
PTCD3-205ENST00000464541 PNMA8BQ9ULN7 279 aaPredicted RBP7.8□□□□□ -1.16
PTCD3-205ENST00000464541 MYBBP1AQ9BQG0 1328 aaKnown RBP7.79□□□□□ -1.16
PTCD3-205ENST00000464541 TRIM24O15164 1050 aa7.79□□□□□ -1.16
PTCD3-205ENST00000464541 AKAP10O43572 662 aa7.79□□□□□ -1.16
PTCD3-205ENST00000464541 AMY1AP04745 511 aa7.79□□□□□ -1.16
PTCD3-205ENST00000464541 HK1P19367 917 aa7.79□□□□□ -1.16
PTCD3-205ENST00000464541 DDCP20711 480 aa7.79□□□□□ -1.16
PTCD3-205ENST00000464541 KRTAP10-2P60368 255 aa7.79□□□□□ -1.16
PTCD3-205ENST00000464541 RAB39AQ14964 217 aa7.79□□□□□ -1.16
PTCD3-205ENST00000464541 ANKS6Q68DC2 871 aa7.79□□□□□ -1.16
PTCD3-205ENST00000464541 SEM1Q6ZVN7 128 aa7.79□□□□□ -1.16
PTCD3-205ENST00000464541 TTC7BQ86TV6 843 aa7.79□□□□□ -1.16
PTCD3-205ENST00000464541 C1orf210Q8IVY1 113 aa7.79□□□□□ -1.16
PTCD3-205ENST00000464541 CCHCR1Q8TD31 782 aa7.79□□□□□ -1.16
PTCD3-205ENST00000464541 SH3RF3Q8TEJ3 882 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms