RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 GTF2H1P32780 548 aa13.83□□□□□ -0.19
VAPB-203ENST00000463370 TNFSF9P41273 254 aa13.83□□□□□ -0.19
VAPB-203ENST00000463370 CLCN3P51790 818 aa13.83□□□□□ -0.19
VAPB-203ENST00000463370 CST9Q5W186 159 aa13.83□□□□□ -0.19
VAPB-203ENST00000463370 RHPN2Q8IUC4 686 aa13.83□□□□□ -0.19
VAPB-203ENST00000463370 THAP2Q9H0W7 228 aa13.83□□□□□ -0.19
VAPB-203ENST00000463370 RBAKQ9NYW8 714 aaPredicted RBP13.83□□□□□ -0.19
VAPB-203ENST00000463370 MORF4L1Q9UBU8 362 aa13.83□□□□□ -0.19
VAPB-203ENST00000463370 CHORDC1Q9UHD1 332 aaPredicted RBP13.83□□□□□ -0.19
VAPB-203ENST00000463370 SLC45A1Q9Y2W3 748 aa13.83□□□□□ -0.19
VAPB-203ENST00000463370 UNCXA6NJT0 531 aa13.83□□□□□ -0.2
VAPB-203ENST00000463370 FAM189A1O60320 539 aa13.83□□□□□ -0.2
VAPB-203ENST00000463370 TBC1D8O95759 1140 aa13.83□□□□□ -0.2
VAPB-203ENST00000463370 C4BPAP04003 597 aaKnown RBP13.83□□□□□ -0.2
VAPB-203ENST00000463370 IGBP1P78318 339 aa13.83□□□□□ -0.2
VAPB-203ENST00000463370 IER5Q5VY09 327 aa13.83□□□□□ -0.2
VAPB-203ENST00000463370 CDCA2Q69YH5 1023 aaPredicted RBP13.83□□□□□ -0.2
VAPB-203ENST00000463370 SPOPLQ6IQ16 392 aa13.83□□□□□ -0.2
VAPB-203ENST00000463370 GPR142Q7Z601 462 aa13.83□□□□□ -0.2
VAPB-203ENST00000463370 ZBTB33Q86T24 672 aa13.83□□□□□ -0.2
VAPB-203ENST00000463370 SPATA4Q8NEY3 305 aa13.83□□□□□ -0.2
VAPB-203ENST00000463370 GTF3C2Q8WUA4 911 aaPredicted RBP13.83□□□□□ -0.2
VAPB-203ENST00000463370 NT5C1BQ96P26 610 aa13.83□□□□□ -0.2
VAPB-203ENST00000463370 SUCLA2Q9P2R7 463 aaPredicted RBP13.83□□□□□ -0.2
VAPB-203ENST00000463370 KCNG1Q9UIX4 513 aa13.83□□□□□ -0.2
VAPB-203ENST00000463370 CNTNAP2Q9UHC6 1331 aa13.82□□□□□ -0.2
VAPB-203ENST00000463370 VNN1O95497 513 aa13.82□□□□□ -0.2
VAPB-203ENST00000463370 CCDC172P0C7W6 258 aa13.82□□□□□ -0.2
VAPB-203ENST00000463370 ZNF286BP0CG31 522 aa13.82□□□□□ -0.2
VAPB-203ENST00000463370 ABCD1P33897 745 aa13.82□□□□□ -0.2
VAPB-203ENST00000463370 RNASE9P60153 205 aaKnown RBP13.82□□□□□ -0.2
VAPB-203ENST00000463370 ZACNQ401N2 412 aa13.82□□□□□ -0.2
VAPB-203ENST00000463370 ZNF572Q7Z3I7 529 aaPredicted RBP13.82□□□□□ -0.2
VAPB-203ENST00000463370 CDR2LQ86X02 465 aaPredicted RBP13.82□□□□□ -0.2
VAPB-203ENST00000463370 OR5B17Q8NGF7 314 aa13.82□□□□□ -0.2
VAPB-203ENST00000463370 SLC35G2Q8TBE7 412 aa13.82□□□□□ -0.2
VAPB-203ENST00000463370 AFG1LQ8WV93 481 aa13.82□□□□□ -0.2
VAPB-203ENST00000463370 NLRP4Q96MN2 994 aa13.82□□□□□ -0.2
VAPB-203ENST00000463370 FNBP1Q96RU3 617 aa13.82□□□□□ -0.2
VAPB-203ENST00000463370 SMARCAD1Q9H4L7 1026 aa13.82□□□□□ -0.2
VAPB-203ENST00000463370 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.82□□□□□ -0.2
VAPB-203ENST00000463370 FAM53CQ9NYF3 392 aa13.82□□□□□ -0.2
VAPB-203ENST00000463370 INTUQ9ULD6 942 aa13.82□□□□□ -0.2
VAPB-203ENST00000463370 COG5Q9UP83 839 aa13.82□□□□□ -0.2
VAPB-203ENST00000463370 LGALS2P05162 132 aa13.82□□□□□ -0.2
VAPB-203ENST00000463370 MMEP08473 750 aa13.82□□□□□ -0.2
VAPB-203ENST00000463370 TMEM253P0C7T8 217 aa13.82□□□□□ -0.2
VAPB-203ENST00000463370 MFAP3P55082 362 aa13.82□□□□□ -0.2
VAPB-203ENST00000463370 METTL13Q8N6R0 699 aa13.82□□□□□ -0.2
VAPB-203ENST00000463370 C2orf69Q8N8R5 385 aa13.82□□□□□ -0.2
VAPB-203ENST00000463370 HDAC7Q8WUI4 952 aa13.82□□□□□ -0.2
VAPB-203ENST00000463370 MINDY3Q9H8M7 445 aa13.82□□□□□ -0.2
VAPB-203ENST00000463370 KIAA1586Q9HCI6 787 aa13.82□□□□□ -0.2
VAPB-203ENST00000463370 ABCB6Q9NP58 842 aa13.82□□□□□ -0.2
VAPB-203ENST00000463370 ATP8B3O60423 1300 aa13.81□□□□□ -0.2
VAPB-203ENST00000463370 A0A0A6YYK5 440 aaPredicted RBP13.81□□□□□ -0.2
VAPB-203ENST00000463370 CCDC151A5D8V7 595 aa13.81□□□□□ -0.2
VAPB-203ENST00000463370 ABLIM1O14639 778 aa13.81□□□□□ -0.2
VAPB-203ENST00000463370 CLDN3O15551 220 aa13.81□□□□□ -0.2
VAPB-203ENST00000463370 B4GALT5O43286 388 aa13.81□□□□□ -0.2
VAPB-203ENST00000463370 CSDE1O75534 798 aaKnown RBP13.81□□□□□ -0.2
VAPB-203ENST00000463370 HLA-DRAP01903 254 aa13.81□□□□□ -0.2
VAPB-203ENST00000463370 IQCF3P0C7M6 154 aa13.81□□□□□ -0.2
VAPB-203ENST00000463370 ZBTB48P10074 688 aaPredicted RBP13.81□□□□□ -0.2
VAPB-203ENST00000463370 FKBP1BP68106 108 aa13.81□□□□□ -0.2
VAPB-203ENST00000463370 FMO1Q01740 532 aa13.81□□□□□ -0.2
VAPB-203ENST00000463370 SLFN12LQ6IEE8 588 aa13.81□□□□□ -0.2
VAPB-203ENST00000463370 EFCAB12Q6NXP0 572 aa13.81□□□□□ -0.2
VAPB-203ENST00000463370 USP37Q86T82 979 aa13.81□□□□□ -0.2
VAPB-203ENST00000463370 ZBTB9Q96C00 473 aa13.81□□□□□ -0.2
VAPB-203ENST00000463370 PPP1R16BQ96T49 567 aa13.81□□□□□ -0.2
VAPB-203ENST00000463370 ACO2Q99798 780 aaKnown RBP13.81□□□□□ -0.2
VAPB-203ENST00000463370 APOBEC3GQ9HC16 384 aaKnown RBP13.81□□□□□ -0.2
VAPB-203ENST00000463370 IVNS1ABPQ9Y6Y0 642 aa13.81□□□□□ -0.2
VAPB-203ENST00000463370 MYH10P35580 1976 aa13.81□□□□□ -0.2
VAPB-203ENST00000463370 NCANO14594 1321 aa13.81□□□□□ -0.2
VAPB-203ENST00000463370 LOC102724159A0A0B4J2E5 919 aa13.81□□□□□ -0.2
VAPB-203ENST00000463370 ADCY6O43306 1168 aa13.81□□□□□ -0.2
VAPB-203ENST00000463370 BUB1BO60566 1050 aaPredicted RBP13.81□□□□□ -0.2
VAPB-203ENST00000463370 C22orf31O95567 290 aa13.81□□□□□ -0.2
VAPB-203ENST00000463370 FTLP02792 175 aaPredicted RBP13.81□□□□□ -0.2
VAPB-203ENST00000463370 PRKCBP05771 671 aa13.81□□□□□ -0.2
VAPB-203ENST00000463370 INSRRP14616 1297 aa13.81□□□□□ -0.2
VAPB-203ENST00000463370 CYP11B1P15538 503 aa13.81□□□□□ -0.2
VAPB-203ENST00000463370 GCLCP48506 637 aaPredicted RBP13.81□□□□□ -0.2
VAPB-203ENST00000463370 BIRC3Q13489 604 aa13.81□□□□□ -0.2
VAPB-203ENST00000463370 BRD3Q15059 726 aa13.81□□□□□ -0.2
VAPB-203ENST00000463370 PWP2Q15269 919 aaKnown RBP13.81□□□□□ -0.2
VAPB-203ENST00000463370 LONRF2Q1L5Z9 754 aa13.81□□□□□ -0.2
VAPB-203ENST00000463370 BEND6Q5SZJ8 279 aaPredicted RBP13.81□□□□□ -0.2
VAPB-203ENST00000463370 SLFN11Q7Z7L1 901 aa13.81□□□□□ -0.2
VAPB-203ENST00000463370 FMNL3Q8IVF7 1028 aa13.81□□□□□ -0.2
VAPB-203ENST00000463370 RFFLQ8WZ73 363 aa13.81□□□□□ -0.2
VAPB-203ENST00000463370 RPGRIP1Q96KN7 1286 aa13.81□□□□□ -0.2
VAPB-203ENST00000463370 ARFGAP3Q9NP61 516 aa13.81□□□□□ -0.2
VAPB-203ENST00000463370 RBM12Q9NTZ6 932 aaKnown RBP13.81□□□□□ -0.2
VAPB-203ENST00000463370 OGFRQ9NZT2 677 aa13.81□□□□□ -0.2
VAPB-203ENST00000463370 TSKSQ9UJT2 592 aa13.81□□□□□ -0.2
VAPB-203ENST00000463370 UMODL1Q5DID0 1318 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 KCNK3O14649 394 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms