RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 ILDR1Q86SU0 546 aaPredicted RBP16.73■□□□□ 0.27
SMC4-204ENST00000462787 RCOR2Q8IZ40 523 aa16.73■□□□□ 0.27
SMC4-204ENST00000462787 ACAP3Q96P50 834 aa16.73■□□□□ 0.27
SMC4-204ENST00000462787 LBHD1Q9BQE6 289 aaPredicted RBP16.73■□□□□ 0.27
SMC4-204ENST00000462787 L3MBTL1Q9Y468 752 aa16.73■□□□□ 0.27
SMC4-204ENST00000462787 ARAP3Q8WWN8 1544 aa16.73■□□□□ 0.27
SMC4-204ENST00000462787 HSPA13P48723 471 aa16.73■□□□□ 0.27
SMC4-204ENST00000462787 IL1RL1Q01638 556 aa16.73■□□□□ 0.27
SMC4-204ENST00000462787 PDXDC2PQ6P474 469 aa16.73■□□□□ 0.27
SMC4-204ENST00000462787 KIAA0825Q8IV33 1275 aa16.73■□□□□ 0.27
SMC4-204ENST00000462787 MCUQ8NE86 351 aa16.73■□□□□ 0.27
SMC4-204ENST00000462787 B4GALNT2Q8NHY0 566 aa16.73■□□□□ 0.27
SMC4-204ENST00000462787 HSPH1Q92598 858 aa16.73■□□□□ 0.27
SMC4-204ENST00000462787 PLA2G12BQ9BX93 195 aa16.73■□□□□ 0.27
SMC4-204ENST00000462787 VPS11Q9H270 941 aa16.73■□□□□ 0.27
SMC4-204ENST00000462787 H3BRJ5 948 aa16.72■□□□□ 0.27
SMC4-204ENST00000462787 GSTA4O15217 222 aa16.72■□□□□ 0.27
SMC4-204ENST00000462787 CACNA2D1P54289 1103 aa16.72■□□□□ 0.27
SMC4-204ENST00000462787 STX3Q13277 289 aa16.72■□□□□ 0.27
SMC4-204ENST00000462787 MAPRE2Q15555 327 aa16.72■□□□□ 0.27
SMC4-204ENST00000462787 IRGCQ6NXR0 463 aa16.72■□□□□ 0.27
SMC4-204ENST00000462787 GIPC2Q8TF65 315 aa16.72■□□□□ 0.27
SMC4-204ENST00000462787 CMTM5Q96DZ9 223 aa16.72■□□□□ 0.27
SMC4-204ENST00000462787 GOLPH3Q9H4A6 298 aa16.72■□□□□ 0.27
SMC4-204ENST00000462787 SEPT9Q9UHD8 586 aaPredicted RBP16.72■□□□□ 0.27
SMC4-204ENST00000462787 NRXN1Q9ULB1 1477 aa16.72■□□□□ 0.27
SMC4-204ENST00000462787 SMAPO00193 183 aa16.72■□□□□ 0.27
SMC4-204ENST00000462787 MEA1Q16626 185 aa16.72■□□□□ 0.27
SMC4-204ENST00000462787 OR6B2Q6IFH4 312 aa16.72■□□□□ 0.27
SMC4-204ENST00000462787 LCA5Q86VQ0 697 aa16.72■□□□□ 0.27
SMC4-204ENST00000462787 MREGQ8N565 214 aa16.72■□□□□ 0.27
SMC4-204ENST00000462787 CPVLQ9H3G5 476 aa16.72■□□□□ 0.27
SMC4-204ENST00000462787 KRT82Q9NSB4 513 aa16.72■□□□□ 0.27
SMC4-204ENST00000462787 A0A0A6YYK5 440 aaPredicted RBP16.72■□□□□ 0.27
SMC4-204ENST00000462787 FAM237AA0A1B0GTK4 181 aa16.72■□□□□ 0.27
SMC4-204ENST00000462787 GOLGA8RI6L899 631 aa16.72■□□□□ 0.27
SMC4-204ENST00000462787 TAC1P20366 129 aa16.72■□□□□ 0.27
SMC4-204ENST00000462787 PEX3P56589 373 aa16.72■□□□□ 0.27
SMC4-204ENST00000462787 PSMC1P62191 440 aaKnown RBP16.72■□□□□ 0.27
SMC4-204ENST00000462787 SLC13A5Q86YT5 568 aaPredicted RBP16.72■□□□□ 0.27
SMC4-204ENST00000462787 RGL1Q9NZL6 768 aa16.72■□□□□ 0.27
SMC4-204ENST00000462787 MYO3AQ8NEV4 1616 aa16.72■□□□□ 0.27
SMC4-204ENST00000462787 ESYT2A0FGR8 921 aa16.72■□□□□ 0.27
SMC4-204ENST00000462787 AHCYL1O43865 530 aa16.72■□□□□ 0.27
SMC4-204ENST00000462787 LDHAP00338 332 aaKnown RBP16.72■□□□□ 0.27
SMC4-204ENST00000462787 FAM153BP0C7A2 387 aa16.72■□□□□ 0.27
SMC4-204ENST00000462787 TAP1Q03518 808 aa16.72■□□□□ 0.27
SMC4-204ENST00000462787 FAM153CQ494X1 144 aa16.72■□□□□ 0.27
SMC4-204ENST00000462787 TBC1D10BQ4KMP7 808 aaPredicted RBP16.72■□□□□ 0.27
SMC4-204ENST00000462787 ANKMY2Q8IV38 441 aa16.72■□□□□ 0.27
SMC4-204ENST00000462787 FAM153AQ9UHL3 310 aa16.72■□□□□ 0.27
SMC4-204ENST00000462787 CDC42BPGQ6DT37 1551 aa16.72■□□□□ 0.27
SMC4-204ENST00000462787 CNTNAP5Q8WYK1 1306 aa16.72■□□□□ 0.27
SMC4-204ENST00000462787 CEP152O94986 1710 aa16.71■□□□□ 0.27
SMC4-204ENST00000462787 STRNO43815 780 aa16.71■□□□□ 0.27
SMC4-204ENST00000462787 EYA4O95677 639 aa16.71■□□□□ 0.27
SMC4-204ENST00000462787 CD58P19256 250 aa16.71■□□□□ 0.27
SMC4-204ENST00000462787 DCAF4Q8WV16 495 aa16.71■□□□□ 0.27
SMC4-204ENST00000462787 SLC7A3Q8WY07 619 aa16.71■□□□□ 0.27
SMC4-204ENST00000462787 TATDN2Q93075 761 aa16.71■□□□□ 0.27
SMC4-204ENST00000462787 FAM192AQ9GZU8 254 aa16.71■□□□□ 0.27
SMC4-204ENST00000462787 ASNSD1Q9NWL6 643 aa16.71■□□□□ 0.27
SMC4-204ENST00000462787 WHRNQ9P202 907 aa16.71■□□□□ 0.27
SMC4-204ENST00000462787 LRRC10BA6NIK2 292 aa16.71■□□□□ 0.27
SMC4-204ENST00000462787 SPAG6O75602 509 aa16.71■□□□□ 0.27
SMC4-204ENST00000462787 CASP2P42575 452 aa16.71■□□□□ 0.27
SMC4-204ENST00000462787 NEK2P51955 445 aa16.71■□□□□ 0.27
SMC4-204ENST00000462787 EFTUD2Q15029 972 aaKnown RBP eCLIP16.71■□□□□ 0.271e-7■■□□□ 13.4
SMC4-204ENST00000462787 KLC3Q6P597 504 aa16.71■□□□□ 0.27
SMC4-204ENST00000462787 PADI6Q6TGC4 694 aa16.71■□□□□ 0.27
SMC4-204ENST00000462787 OPTNQ96CV9 577 aa16.71■□□□□ 0.27
SMC4-204ENST00000462787 PGM2Q96G03 612 aa16.71■□□□□ 0.27
SMC4-204ENST00000462787 A1CFQ9NQ94 594 aaKnown RBP16.71■□□□□ 0.27
SMC4-204ENST00000462787 PICK1Q9NRD5 415 aa16.71■□□□□ 0.27
SMC4-204ENST00000462787 SALL1Q9NSC2 1324 aa16.71■□□□□ 0.27
SMC4-204ENST00000462787 ATP9AO75110 1047 aa16.71■□□□□ 0.27
SMC4-204ENST00000462787 TMCC1O94876 653 aa16.71■□□□□ 0.27
SMC4-204ENST00000462787 TBXAS1P24557 533 aaPredicted RBP16.71■□□□□ 0.27
SMC4-204ENST00000462787 CRKLP46109 303 aaKnown RBP16.71■□□□□ 0.27
SMC4-204ENST00000462787 GABPAQ06546 454 aa16.71■□□□□ 0.27
SMC4-204ENST00000462787 TMC3Q7Z5M5 1100 aa16.71■□□□□ 0.27
SMC4-204ENST00000462787 PARVAQ9NVD7 372 aa16.71■□□□□ 0.27
SMC4-204ENST00000462787 ADCY3O60266 1144 aa16.71■□□□□ 0.26
SMC4-204ENST00000462787 TFRCP02786 760 aaKnown RBP16.71■□□□□ 0.26
SMC4-204ENST00000462787 ERFP50548 548 aa16.71■□□□□ 0.26
SMC4-204ENST00000462787 MDH1BQ5I0G3 518 aa16.71■□□□□ 0.26
SMC4-204ENST00000462787 TLR10Q9BXR5 811 aa16.71■□□□□ 0.26
SMC4-204ENST00000462787 KBTBD4Q9NVX7 518 aa16.71■□□□□ 0.26
SMC4-204ENST00000462787 MCM8Q9UJA3 840 aa16.71■□□□□ 0.26
SMC4-204ENST00000462787 HECW2Q9P2P5 1572 aa16.71■□□□□ 0.26
SMC4-204ENST00000462787 PJA2O43164 708 aa16.7■□□□□ 0.26
SMC4-204ENST00000462787 ROR1Q01973 937 aa16.7■□□□□ 0.26
SMC4-204ENST00000462787 C16orf89Q6UX73 402 aa16.7■□□□□ 0.26
SMC4-204ENST00000462787 ZNF662Q6ZS27 426 aa16.7■□□□□ 0.26
SMC4-204ENST00000462787 CEP19Q96LK0 163 aa16.7■□□□□ 0.26
SMC4-204ENST00000462787 ZSWIM1Q9BR11 485 aa16.7■□□□□ 0.26
SMC4-204ENST00000462787 SLC38A10Q9HBR0 1119 aa16.7■□□□□ 0.26
SMC4-204ENST00000462787 CALB2P22676 271 aa16.7■□□□□ 0.26
SMC4-204ENST00000462787 KCNJ1P48048 391 aa16.7■□□□□ 0.26
SMC4-204ENST00000462787 FBXO25Q8TCJ0 367 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms