RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 GPATCH4Q5T3I0 446 aaKnown RBP6.32□□□□□ -1.4
CLK1-207ENST00000461981 PDE12Q6L8Q7 609 aaKnown RBP6.32□□□□□ -1.4
CLK1-207ENST00000461981 TAPT1Q6NXT6 567 aa6.32□□□□□ -1.4
CLK1-207ENST00000461981 MCF2L2Q86YR7 1114 aa6.32□□□□□ -1.4
CLK1-207ENST00000461981 SLC7A5P1Q8MH63 180 aa6.32□□□□□ -1.4
CLK1-207ENST00000461981 PIAS4Q8N2W9 510 aaPredicted RBP6.32□□□□□ -1.4
CLK1-207ENST00000461981 LCORLQ8N3X6 602 aa6.32□□□□□ -1.4
CLK1-207ENST00000461981 CCDC43Q96MW1 224 aaKnown RBP6.32□□□□□ -1.4
CLK1-207ENST00000461981 POP1Q99575 1024 aaKnown RBP6.32□□□□□ -1.4
CLK1-207ENST00000461981 SLC39A3Q9BRY0 314 aa6.32□□□□□ -1.4
CLK1-207ENST00000461981 PBX4Q9BYU1 374 aa6.32□□□□□ -1.4
CLK1-207ENST00000461981 SH2B1Q9NRF2 756 aaPredicted RBP6.32□□□□□ -1.4
CLK1-207ENST00000461981 CFAP45Q9UL16 551 aa6.32□□□□□ -1.4
CLK1-207ENST00000461981 INTUQ9ULD6 942 aa6.32□□□□□ -1.4
CLK1-207ENST00000461981 TDRKHQ9Y2W6 561 aaKnown RBP6.32□□□□□ -1.4
CLK1-207ENST00000461981 MAGEA13PA6NCF6 341 aa6.32□□□□□ -1.4
CLK1-207ENST00000461981 FAM196BA6NMK8 535 aa6.32□□□□□ -1.4
CLK1-207ENST00000461981 ASGR1P07306 291 aa6.32□□□□□ -1.4
CLK1-207ENST00000461981 PDGFRBP09619 1106 aa6.32□□□□□ -1.4
CLK1-207ENST00000461981 NEK2P51955 445 aa6.32□□□□□ -1.4
CLK1-207ENST00000461981 STAT2P52630 851 aa6.32□□□□□ -1.4
CLK1-207ENST00000461981 CREB3L3Q68CJ9 461 aa6.32□□□□□ -1.4
CLK1-207ENST00000461981 SNRNP48Q6IEG0 339 aaKnown RBP6.32□□□□□ -1.4
CLK1-207ENST00000461981 OR52E8Q6IFG1 317 aa6.32□□□□□ -1.4
CLK1-207ENST00000461981 FAM47EQ6ZV65 393 aa6.32□□□□□ -1.4
CLK1-207ENST00000461981 SCUBE1Q8IWY4 988 aa6.32□□□□□ -1.4
CLK1-207ENST00000461981 SIX5Q8N196 739 aa6.32□□□□□ -1.4
CLK1-207ENST00000461981 LRRC47Q8N1G4 583 aaKnown RBP6.32□□□□□ -1.4
CLK1-207ENST00000461981 SCFD2Q8WU76 684 aa6.32□□□□□ -1.4
CLK1-207ENST00000461981 TRAPPC9Q96Q05 1148 aa6.32□□□□□ -1.4
CLK1-207ENST00000461981 SCOCQ9UIL1 159 aa6.32□□□□□ -1.4
CLK1-207ENST00000461981 A0A1W2PQ67 120 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 ZNF233A6NK53 670 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 C5orf67F2Z3F1 127 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 HAS3O00219 553 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 TROVE2P10155 538 aaKnown RBP eCLIP6.31□□□□□ -1.4
CLK1-207ENST00000461981 COL9A1P20849 921 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 HTRA4P83105 476 aaPredicted RBP6.31□□□□□ -1.4
CLK1-207ENST00000461981 ZNF268Q14587 947 aaPredicted RBP6.31□□□□□ -1.4
CLK1-207ENST00000461981 ODF2Q5BJF6 829 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 RUFY4Q6ZNE9 571 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 CCDC84Q86UT8 332 aaPredicted RBP6.31□□□□□ -1.4
CLK1-207ENST00000461981 MAP7D3Q8IWC1 876 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 ZNF444Q8N0Y2 327 aaPredicted RBP6.31□□□□□ -1.4
CLK1-207ENST00000461981 CYP4X1Q8N118 509 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.31□□□□□ -1.4
CLK1-207ENST00000461981 ENGASEQ8NFI3 743 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 BRF1Q92994 677 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 ZSCAN31Q96LW9 406 aaPredicted RBP6.31□□□□□ -1.4
CLK1-207ENST00000461981 MAP3K14Q99558 947 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 PLVAPQ9BX97 442 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 HIPK3Q9H422 1215 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 RMND1Q9NWS8 449 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 TRIM10Q9UDY6 481 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 GUCA1BQ9UMX6 200 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 AGAP1Q9UPQ3 857 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 TMED5Q9Y3A6 229 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 TSC22D4Q9Y3Q8 395 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 MTCH2Q9Y6C9 303 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 A0A0J9YVX5 310 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 TARSL2A2RTX5 802 aaKnown RBP6.31□□□□□ -1.4
CLK1-207ENST00000461981 CCT8L1PA6NM43 557 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 ZNF185O15231 689 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 JAK2O60674 1132 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 HIP1RO75146 1068 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 TACC1O75410 805 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 GSTT2P0CG29 244 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 GSTT2BP0CG30 244 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 NQO1P15559 274 aaKnown RBP6.31□□□□□ -1.4
CLK1-207ENST00000461981 NDUFA8P51970 172 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 RAD23BP54727 409 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 AMPD2Q01433 879 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 DHX9Q08211 1270 aaKnown RBP6.31□□□□□ -1.4
CLK1-207ENST00000461981 GRIN2CQ14957 1233 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 KRT72Q14CN4 511 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 CNPY1Q3B7I2 92 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 CFAP157Q5JU67 520 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 TMEM31Q5JXX7 168 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 CFAP58Q5T655 872 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 SPECC1LQ69YQ0 1117 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 C16orf59Q7L2K0 433 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 TLK2Q86UE8 772 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 APLFQ8IW19 511 aaPredicted RBP6.31□□□□□ -1.4
CLK1-207ENST00000461981 STK11IPQ8N1F8 1099 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 MLKLQ8NB16 471 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 FBF1Q8TES7 1133 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 ATP6V0A1Q93050 837 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 PPP1R14BQ96C90 147 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 SH3GL1Q99961 368 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 ALDH8A1Q9H2A2 487 aaPredicted RBP6.31□□□□□ -1.4
CLK1-207ENST00000461981 SLC28A3Q9HAS3 691 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 ADAM22Q9P0K1 906 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 STK39Q9UEW8 545 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 DMGDHQ9UI17 866 aaKnown RBP6.31□□□□□ -1.4
CLK1-207ENST00000461981 RASAL2Q9UJF2 1139 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 CYP46A1Q9Y6A2 500 aa6.31□□□□□ -1.4
CLK1-207ENST00000461981 GSG1L2A8MUP6 293 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 ABLIM1O14639 778 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 TRAPPC3O43617 180 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 TGFB3P10600 412 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms