RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 ZBTB45Q96K62 511 aaPredicted RBP21.8■■□□□ 1.08
CCM2-203ENST00000461377 SELENOOQ9BVL4 669 aa21.8■■□□□ 1.08
CCM2-203ENST00000461377 AMFRQ9UKV5 643 aa21.8■■□□□ 1.08
CCM2-203ENST00000461377 A0A0B4J269 797 aa21.79■■□□□ 1.08
CCM2-203ENST00000461377 RTN2O75298 545 aa21.79■■□□□ 1.08
CCM2-203ENST00000461377 LDHAP00338 332 aaKnown RBP21.79■■□□□ 1.08
CCM2-203ENST00000461377 FTLP02792 175 aaPredicted RBP21.79■■□□□ 1.08
CCM2-203ENST00000461377 GZMAP12544 262 aa21.79■■□□□ 1.08
CCM2-203ENST00000461377 TNFRSF8P28908 595 aa21.79■■□□□ 1.08
CCM2-203ENST00000461377 DRP2Q13474 957 aa21.79■■□□□ 1.08
CCM2-203ENST00000461377 PTPROQ16827 1216 aa21.79■■□□□ 1.08
CCM2-203ENST00000461377 FBXO16Q8IX29 292 aaPredicted RBP21.79■■□□□ 1.08
CCM2-203ENST00000461377 CALR3Q96L12 384 aaKnown RBP21.79■■□□□ 1.08
CCM2-203ENST00000461377 FAM81BQ96LP2 452 aa21.79■■□□□ 1.08
CCM2-203ENST00000461377 FNBP1Q96RU3 617 aa21.79■■□□□ 1.08
CCM2-203ENST00000461377 COG5Q9UP83 839 aa21.79■■□□□ 1.08
CCM2-203ENST00000461377 ADGRA2Q96PE1 1338 aa21.79■■□□□ 1.08
CCM2-203ENST00000461377 C4BPAP04003 597 aaKnown RBP21.79■■□□□ 1.08
CCM2-203ENST00000461377 CYP11B1P15538 503 aa21.79■■□□□ 1.08
CCM2-203ENST00000461377 ACOT2P49753 483 aa21.79■■□□□ 1.08
CCM2-203ENST00000461377 SLC7A5Q01650 507 aa21.79■■□□□ 1.08
CCM2-203ENST00000461377 FMO1Q01740 532 aa21.79■■□□□ 1.08
CCM2-203ENST00000461377 ZACNQ401N2 412 aa21.79■■□□□ 1.08
CCM2-203ENST00000461377 TAF3Q5VWG9 929 aa21.79■■□□□ 1.08
CCM2-203ENST00000461377 IER5Q5VY09 327 aa21.79■■□□□ 1.08
CCM2-203ENST00000461377 GSPT2Q8IYD1 628 aaKnown RBP21.79■■□□□ 1.08
CCM2-203ENST00000461377 RASGEF1CQ8N431 466 aa21.79■■□□□ 1.08
CCM2-203ENST00000461377 ATP8B4Q8TF62 1192 aa21.79■■□□□ 1.08
CCM2-203ENST00000461377 AENQ8WTP8 325 aaKnown RBP21.79■■□□□ 1.08
CCM2-203ENST00000461377 GLG1Q92896 1179 aa21.79■■□□□ 1.08
CCM2-203ENST00000461377 MSTO1Q9BUK6 570 aa21.79■■□□□ 1.08
CCM2-203ENST00000461377 VIPAS39Q9H9C1 493 aa21.79■■□□□ 1.08
CCM2-203ENST00000461377 ZC3H4Q9UPT8 1303 aaKnown RBP21.79■■□□□ 1.08
CCM2-203ENST00000461377 NOP56O00567 594 aaKnown RBP21.78■■□□□ 1.08
CCM2-203ENST00000461377 CEP104O60308 925 aa21.78■■□□□ 1.08
CCM2-203ENST00000461377 MRPS25P82663 173 aaKnown RBP21.78■■□□□ 1.08
CCM2-203ENST00000461377 WDR78Q5VTH9 848 aa21.78■■□□□ 1.08
CCM2-203ENST00000461377 TRIM50Q86XT4 487 aa21.78■■□□□ 1.08
CCM2-203ENST00000461377 GTF3C2Q8WUA4 911 aaPredicted RBP21.78■■□□□ 1.08
CCM2-203ENST00000461377 PRPF31Q8WWY3 499 aaKnown RBP21.78■■□□□ 1.08
CCM2-203ENST00000461377 FAM84AQ96KN4 292 aa21.78■■□□□ 1.08
CCM2-203ENST00000461377 PI4K2AQ9BTU6 479 aa21.78■■□□□ 1.08
CCM2-203ENST00000461377 PDE11AQ9HCR9 933 aa21.78■■□□□ 1.08
CCM2-203ENST00000461377 ACP6Q9NPH0 428 aa21.78■■□□□ 1.08
CCM2-203ENST00000461377 IGKV6-21A0A0C4DH24 114 aa21.78■■□□□ 1.08
CCM2-203ENST00000461377 ZBTB42B2RXF5 422 aa21.78■■□□□ 1.08
CCM2-203ENST00000461377 H3BQF6 201 aa21.78■■□□□ 1.08
CCM2-203ENST00000461377 GAS2O43903 313 aaKnown RBP21.78■■□□□ 1.08
CCM2-203ENST00000461377 MMEP08473 750 aa21.78■■□□□ 1.08
CCM2-203ENST00000461377 MARK3P27448 753 aa21.78■■□□□ 1.08
CCM2-203ENST00000461377 PDE6CP51160 858 aa21.78■■□□□ 1.08
CCM2-203ENST00000461377 RNASE9P60153 205 aaKnown RBP21.78■■□□□ 1.08
CCM2-203ENST00000461377 GPC5P78333 572 aa21.78■■□□□ 1.08
CCM2-203ENST00000461377 CDR2Q01850 454 aa21.78■■□□□ 1.08
CCM2-203ENST00000461377 TDRD10Q5VZ19 366 aaKnown RBP21.78■■□□□ 1.08
CCM2-203ENST00000461377 LMBRD2Q68DH5 695 aaPredicted RBP21.78■■□□□ 1.08
CCM2-203ENST00000461377 DHX37Q8IY37 1157 aaKnown RBP21.78■■□□□ 1.08
CCM2-203ENST00000461377 SCFD2Q8WU76 684 aa21.78■■□□□ 1.08
CCM2-203ENST00000461377 DHX38Q92620 1227 aaKnown RBP21.78■■□□□ 1.08
CCM2-203ENST00000461377 SLC10A4Q96EP9 437 aa21.78■■□□□ 1.08
CCM2-203ENST00000461377 SPATA33Q96N06 139 aa21.78■■□□□ 1.08
CCM2-203ENST00000461377 RBAKQ9NYW8 714 aaPredicted RBP21.78■■□□□ 1.08
CCM2-203ENST00000461377 ANKFY1Q9P2R3 1169 aa21.78■■□□□ 1.08
CCM2-203ENST00000461377 PNMA3Q9UL41 463 aa21.78■■□□□ 1.08
CCM2-203ENST00000461377 IQCA1LA6NCM1 817 aa21.77■■□□□ 1.08
CCM2-203ENST00000461377 PGRMC1O00264 195 aaKnown RBP21.77■■□□□ 1.08
CCM2-203ENST00000461377 HLA-DRAP01903 254 aa21.77■■□□□ 1.08
CCM2-203ENST00000461377 TNNI1P19237 187 aa21.77■■□□□ 1.08
CCM2-203ENST00000461377 TNNT3P45378 269 aaPredicted RBP21.77■■□□□ 1.08
CCM2-203ENST00000461377 EFNA5P52803 228 aa21.77■■□□□ 1.08
CCM2-203ENST00000461377 TNNC1P63316 161 aa21.77■■□□□ 1.08
CCM2-203ENST00000461377 GPS2Q13227 327 aa21.77■■□□□ 1.08
CCM2-203ENST00000461377 MKRN4PQ13434 485 aaPredicted RBP21.77■■□□□ 1.08
CCM2-203ENST00000461377 PLCB4Q15147 1175 aa21.77■■□□□ 1.08
CCM2-203ENST00000461377 ZBTB41Q5SVQ8 909 aa21.77■■□□□ 1.08
CCM2-203ENST00000461377 CDCA2Q69YH5 1023 aaPredicted RBP21.77■■□□□ 1.08
CCM2-203ENST00000461377 ZPBP2Q6X784 338 aa21.77■■□□□ 1.08
CCM2-203ENST00000461377 EXOC8Q8IYI6 725 aa21.77■■□□□ 1.08
CCM2-203ENST00000461377 TCP11Q8WWU5 503 aa21.77■■□□□ 1.08
CCM2-203ENST00000461377 DDX1Q92499 740 aaKnown RBP21.77■■□□□ 1.08
CCM2-203ENST00000461377 ELMO3Q96BJ8 720 aa21.77■■□□□ 1.08
CCM2-203ENST00000461377 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.77■■□□□ 1.08
CCM2-203ENST00000461377 CCDC113Q9H0I3 377 aa21.77■■□□□ 1.08
CCM2-203ENST00000461377 C1orf112Q9NSG2 853 aa21.77■■□□□ 1.08
CCM2-203ENST00000461377 PTPRJQ12913 1337 aa21.77■■□□□ 1.08
CCM2-203ENST00000461377 DDX3YO15523 660 aaKnown RBP21.76■■□□□ 1.07
CCM2-203ENST00000461377 CYP2C8P10632 490 aa21.76■■□□□ 1.07
CCM2-203ENST00000461377 KRT12Q99456 494 aa21.76■■□□□ 1.07
CCM2-203ENST00000461377 CGRRF1Q99675 332 aa21.76■■□□□ 1.07
CCM2-203ENST00000461377 EFCC1Q9HA90 598 aa21.76■■□□□ 1.07
CCM2-203ENST00000461377 SCN4AP35499 1836 aa21.76■■□□□ 1.07
CCM2-203ENST00000461377 FAM170AA1A519 330 aa21.76■■□□□ 1.07
CCM2-203ENST00000461377 UNCXA6NJT0 531 aa21.76■■□□□ 1.07
CCM2-203ENST00000461377 ASB14A6NK59 587 aa21.76■■□□□ 1.07
CCM2-203ENST00000461377 MTA2O94776 668 aa21.76■■□□□ 1.07
CCM2-203ENST00000461377 TERF2Q15554 542 aa21.76■■□□□ 1.07
CCM2-203ENST00000461377 C11orf63Q6NUN7 778 aa21.76■■□□□ 1.07
CCM2-203ENST00000461377 COPS5Q92905 334 aa21.76■■□□□ 1.07
CCM2-203ENST00000461377 HINFPQ9BQA5 517 aa21.76■■□□□ 1.07
CCM2-203ENST00000461377 ACBD3Q9H3P7 528 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms