RNA–Protein interactions for RNA: ENST00000460962.5

GCOM1-203, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 3,156 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-203ENST00000460962 GOLGA8JA6NMD2 632 aa12.96□□□□□ -0.33
GCOM1-203ENST00000460962 ECE2O60344 883 aa12.96□□□□□ -0.33
GCOM1-203ENST00000460962 MAPTP10636 758 aaKnown RBP12.96□□□□□ -0.33
GCOM1-203ENST00000460962 PLS3P13797 630 aa12.96□□□□□ -0.33
GCOM1-203ENST00000460962 KRT17Q04695 432 aa12.96□□□□□ -0.33
GCOM1-203ENST00000460962 LRRC14Q15048 493 aa12.96□□□□□ -0.33
GCOM1-203ENST00000460962 SLC27A3Q5K4L6 730 aa12.96□□□□□ -0.33
GCOM1-203ENST00000460962 HAUS6Q7Z4H7 955 aa12.96□□□□□ -0.33
GCOM1-203ENST00000460962 ARHGEF2Q92974 986 aaKnown RBP12.96□□□□□ -0.33
GCOM1-203ENST00000460962 POP1Q99575 1024 aaKnown RBP12.96□□□□□ -0.33
GCOM1-203ENST00000460962 MXRA8Q9BRK3 442 aa12.96□□□□□ -0.33
GCOM1-203ENST00000460962 DDX23Q9BUQ8 820 aaKnown RBP12.96□□□□□ -0.33
GCOM1-203ENST00000460962 LRRC19Q9H756 370 aa12.96□□□□□ -0.33
GCOM1-203ENST00000460962 BAIAP2L1Q9UHR4 511 aa12.96□□□□□ -0.33
GCOM1-203ENST00000460962 MCM8Q9UJA3 840 aa12.96□□□□□ -0.33
GCOM1-203ENST00000460962 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.96□□□□□ -0.33
GCOM1-203ENST00000460962 P4HBP07237 508 aaKnown RBP12.96□□□□□ -0.33
GCOM1-203ENST00000460962 FKBP1AP62942 108 aaKnown RBP12.96□□□□□ -0.33
GCOM1-203ENST00000460962 C1orf54Q8WWF1 131 aa12.96□□□□□ -0.33
GCOM1-203ENST00000460962 SHC3Q92529 594 aa12.96□□□□□ -0.33
GCOM1-203ENST00000460962 ZNF622Q969S3 477 aaKnown RBP eCLIP12.96□□□□□ -0.33
GCOM1-203ENST00000460962 RANBP17Q9H2T7 1088 aaKnown RBP12.96□□□□□ -0.33
GCOM1-203ENST00000460962 WHRNQ9P202 907 aa12.96□□□□□ -0.33
GCOM1-203ENST00000460962 LOXHD1Q8IVV2 1947 aa12.96□□□□□ -0.34
GCOM1-203ENST00000460962 CYP11B1P15538 503 aa12.95□□□□□ -0.34
GCOM1-203ENST00000460962 SNX1Q13596 522 aa12.95□□□□□ -0.34
GCOM1-203ENST00000460962 TNIP1Q15025 636 aa12.95□□□□□ -0.34
GCOM1-203ENST00000460962 TCP11Q8WWU5 503 aa12.95□□□□□ -0.34
GCOM1-203ENST00000460962 ABCF3Q9NUQ8 709 aa12.95□□□□□ -0.34
GCOM1-203ENST00000460962 ZBTB21Q9ULJ3 1066 aa12.95□□□□□ -0.34
GCOM1-203ENST00000460962 TMX2Q9Y320 296 aa12.95□□□□□ -0.34
GCOM1-203ENST00000460962 ZHX2Q9Y6X8 837 aa12.95□□□□□ -0.34
GCOM1-203ENST00000460962 AFF2P51816 1311 aa12.95□□□□□ -0.34
GCOM1-203ENST00000460962 SNX3O60493 162 aa12.95□□□□□ -0.34
GCOM1-203ENST00000460962 ATP6V1G2O95670 118 aa12.95□□□□□ -0.34
GCOM1-203ENST00000460962 ATP5DP30049 168 aa12.95□□□□□ -0.34
GCOM1-203ENST00000460962 PDE6BP35913 854 aa12.95□□□□□ -0.34
GCOM1-203ENST00000460962 RARRES1P49788 294 aa12.95□□□□□ -0.34
GCOM1-203ENST00000460962 ZYXQ15942 572 aaKnown RBP12.95□□□□□ -0.34
GCOM1-203ENST00000460962 TBC1D10BQ4KMP7 808 aaPredicted RBP12.95□□□□□ -0.34
GCOM1-203ENST00000460962 PNMA8AQ86V59 439 aaPredicted RBP12.95□□□□□ -0.34
GCOM1-203ENST00000460962 CCDC127Q96BQ5 260 aa12.95□□□□□ -0.34
GCOM1-203ENST00000460962 MASTLQ96GX5 879 aa12.95□□□□□ -0.34
GCOM1-203ENST00000460962 GJD4Q96KN9 370 aaPredicted RBP12.95□□□□□ -0.34
GCOM1-203ENST00000460962 SH2D3AQ9BRG2 576 aa12.95□□□□□ -0.34
GCOM1-203ENST00000460962 LTBP4Q8N2S1 1624 aa12.95□□□□□ -0.34
GCOM1-203ENST00000460962 TMEM120BA0PK00 339 aa12.95□□□□□ -0.34
GCOM1-203ENST00000460962 MAPK13O15264 365 aa12.95□□□□□ -0.34
GCOM1-203ENST00000460962 ADRB2P07550 413 aa12.95□□□□□ -0.34
GCOM1-203ENST00000460962 CLTAP09496 248 aa12.95□□□□□ -0.34
GCOM1-203ENST00000460962 ITGB5P18084 799 aa12.95□□□□□ -0.34
GCOM1-203ENST00000460962 CDR2Q01850 454 aa12.95□□□□□ -0.34
GCOM1-203ENST00000460962 GRIPAP1Q4V328 841 aa12.95□□□□□ -0.34
GCOM1-203ENST00000460962 CC2D2BQ6DHV5 1058 aa12.95□□□□□ -0.34
GCOM1-203ENST00000460962 TRMT1LQ7Z2T5 733 aaKnown RBP12.95□□□□□ -0.34
GCOM1-203ENST00000460962 TBC1D1Q86TI0 1168 aaPredicted RBP12.95□□□□□ -0.34
GCOM1-203ENST00000460962 TMEM174Q8WUU8 243 aa12.95□□□□□ -0.34
GCOM1-203ENST00000460962 SERPINB12Q96P63 405 aa12.95□□□□□ -0.34
GCOM1-203ENST00000460962 NOD2Q9HC29 1040 aa12.95□□□□□ -0.34
GCOM1-203ENST00000460962 KCNH7Q9NS40 1196 aa12.95□□□□□ -0.34
GCOM1-203ENST00000460962 HERC5Q9UII4 1024 aaKnown RBP12.95□□□□□ -0.34
GCOM1-203ENST00000460962 CFAP73A6NFT4 308 aa12.94□□□□□ -0.34
GCOM1-203ENST00000460962 TCP11X1B4DZS4 312 aa12.94□□□□□ -0.34
GCOM1-203ENST00000460962 SLC16A4O15374 487 aa12.94□□□□□ -0.34
GCOM1-203ENST00000460962 PEX3P56589 373 aa12.94□□□□□ -0.34
GCOM1-203ENST00000460962 GTF2BQ00403 316 aa12.94□□□□□ -0.34
GCOM1-203ENST00000460962 KRT39Q6A163 491 aa12.94□□□□□ -0.34
GCOM1-203ENST00000460962 LDHDQ86WU2 507 aa12.94□□□□□ -0.34
GCOM1-203ENST00000460962 CBWD2Q8IUF1 395 aa12.94□□□□□ -0.34
GCOM1-203ENST00000460962 KIFAP3Q92845 792 aa12.94□□□□□ -0.34
GCOM1-203ENST00000460962 SEMA4DQ92854 862 aa12.94□□□□□ -0.34
GCOM1-203ENST00000460962 IWS1Q96ST2 819 aa12.94□□□□□ -0.34
GCOM1-203ENST00000460962 KCNK9Q9NPC2 374 aa12.94□□□□□ -0.34
GCOM1-203ENST00000460962 AAASQ9NRG9 546 aa12.94□□□□□ -0.34
GCOM1-203ENST00000460962 FGFR1OP2Q9NVK5 253 aa12.94□□□□□ -0.34
GCOM1-203ENST00000460962 USP15Q9Y4E8 981 aaPredicted RBP12.94□□□□□ -0.34
GCOM1-203ENST00000460962 SLX4Q8IY92 1834 aa12.94□□□□□ -0.34
GCOM1-203ENST00000460962 FSCN2O14926 492 aa12.94□□□□□ -0.34
GCOM1-203ENST00000460962 PMM2O15305 246 aa12.94□□□□□ -0.34
GCOM1-203ENST00000460962 ITIH2P19823 946 aa12.94□□□□□ -0.34
GCOM1-203ENST00000460962 SNRNP35Q16560 246 aaKnown RBP12.94□□□□□ -0.34
GCOM1-203ENST00000460962 ANKRD42Q8N9B4 389 aa12.94□□□□□ -0.34
GCOM1-203ENST00000460962 PSPC1Q8WXF1 523 aaKnown RBP12.94□□□□□ -0.34
GCOM1-203ENST00000460962 SLCO2A1Q92959 643 aa12.94□□□□□ -0.34
GCOM1-203ENST00000460962 TBC1D31Q96DN5 1066 aa12.94□□□□□ -0.34
GCOM1-203ENST00000460962 SNF8Q96H20 258 aa12.94□□□□□ -0.34
GCOM1-203ENST00000460962 ANAPC7Q9UJX3 599 aa12.94□□□□□ -0.34
GCOM1-203ENST00000460962 SCN9AQ15858 1988 aa12.94□□□□□ -0.34
GCOM1-203ENST00000460962 EP400Q96L91 3159 aa12.93□□□□□ -0.34
GCOM1-203ENST00000460962 SUN1O94901 812 aa12.93□□□□□ -0.34
GCOM1-203ENST00000460962 ELF1P32519 619 aa12.93□□□□□ -0.34
GCOM1-203ENST00000460962 CHKAP35790 457 aa12.93□□□□□ -0.34
GCOM1-203ENST00000460962 NUGGCQ68CJ6 796 aa12.93□□□□□ -0.34
GCOM1-203ENST00000460962 N4BP2L2Q92802 583 aaPredicted RBP12.93□□□□□ -0.34
GCOM1-203ENST00000460962 PRMT6Q96LA8 375 aaPredicted RBP12.93□□□□□ -0.34
GCOM1-203ENST00000460962 NT5C1BQ96P26 610 aa12.93□□□□□ -0.34
GCOM1-203ENST00000460962 DNAJC17Q9NVM6 304 aaKnown RBP12.93□□□□□ -0.34
GCOM1-203ENST00000460962 GGT7Q9UJ14 662 aa12.93□□□□□ -0.34
GCOM1-203ENST00000460962 USP20Q9Y2K6 914 aa12.93□□□□□ -0.34
GCOM1-203ENST00000460962 UBOX5O94941 541 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms