RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 CNGB3Q9NQW8 809 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 FAM47E-STBD1D6RA91 191 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 SPAG6O75602 509 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 HNRNPH2P55795 449 aaKnown RBP9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 TRIP13Q15645 432 aaPredicted RBP9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 KRT24Q2M2I5 525 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 SLC27A3Q5K4L6 730 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 BTBD8Q5XKL5 378 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 NUGGCQ68CJ6 796 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 USP17L2Q6R6M4 530 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 CMTR1Q8N1G2 835 aaKnown RBP9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 TTC30BQ8N4P2 665 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 THOC1Q96FV9 657 aaKnown RBP9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 FAM49AQ9H0Q0 323 aaPredicted RBP9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 SPACA6W5XKT8 324 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 CFAP99D6REC4 459 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 SH2B2O14492 632 aaPredicted RBP9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 CLIC2O15247 247 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 PDHA1P08559 390 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 SLC1A1P43005 524 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 SLC44A4Q53GD3 710 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 CALML6Q8TD86 181 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 OTUD7AQ8TE49 926 aaPredicted RBP9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 FAM210AQ96ND0 272 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 NUP85Q9BW27 656 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 UTP6Q9NYH9 597 aaKnown RBP9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 STMN3Q9NZ72 180 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 CHD1O14646 1710 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 LOC102724428A0A0B4J2F2 783 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 JAK1P23458 1154 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 NUP62P37198 522 aaPredicted RBP9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 SIK1P57059 783 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 OSTNP61366 133 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 MTFR1Q15390 333 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 OOSP2Q86WS3 158 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 VPS37AQ8NEZ2 397 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 WWP1Q9H0M0 922 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 MAN1B1Q9UKM7 699 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 PLA2R1Q13018 1463 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 FTCDO95954 541 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 STAT3P40763 770 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 CCDC85BQ15834 202 aaPredicted RBP9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 DCAF4L1Q3SXM0 396 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 C16orf62Q7Z3J2 963 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 CATSPER3Q86XQ3 398 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 RAPGEF5Q92565 580 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 KATNAL1Q9BW62 490 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 TMEM245Q9H330 911 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 SARS2Q9NP81 518 aaKnown RBP9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 DOLKQ9UPQ8 538 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 ASB14A6NK59 587 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 GDF11O95390 407 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 LRRC8EQ6NSJ5 796 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 ADCK1Q86TW2 530 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 RSPH1Q8WYR4 309 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 APBB2Q92870 758 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 CMTM5Q96DZ9 223 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 PARVAQ9NVD7 372 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 HDAC6Q9UBN7 1215 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 IQGAP1P46940 1657 aa9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 ZW10O43264 779 aa9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 SEC24BO95487 1268 aa9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 KRT14P02533 472 aa9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 ST13P50502 369 aaKnown RBP9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 BSDC1Q9NW68 430 aaPredicted RBP9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 NOVA2Q9UNW9 492 aaKnown RBP9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 TRAF3IP3Q9Y228 551 aa9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 RP1P56715 2156 aa9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 ENC1O14682 589 aa9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 ZBTB5O15062 677 aa9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 DYRK3O43781 588 aa9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 ALDH1A2O94788 518 aa9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 NR3C1P04150 777 aa9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 HSPA13P48723 471 aa9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 CLCN6P51797 869 aa9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 MRPS35P82673 323 aaKnown RBP9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 SETD3Q86TU7 594 aaPredicted RBP9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 CCNYL1Q8N7R7 359 aa9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 BTN2A2Q8WVV5 523 aa9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 VPS11Q9H270 941 aa9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 TARBP1Q13395 1621 aaKnown RBP9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 HMOX2P30519 316 aa9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 ADCY1Q08828 1119 aa9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 FASTKD1Q53R41 847 aaKnown RBP9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 HNRNPLLQ8WVV9 542 aaKnown RBP9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 CLIC6Q96NY7 704 aa9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 TGS1Q96RS0 853 aaKnown RBP9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 TBC1D23Q9NUY8 699 aa9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 WDR91A4D1P6 747 aa9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 CLASP2O75122 1294 aaKnown RBP9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 ADRM1Q16186 407 aa9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 ALKBH5Q6P6C2 394 aaKnown RBP9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 ZNF513Q8N8E2 541 aaPredicted RBP9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 USP13Q92995 863 aaPredicted RBP9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 PGBD4Q96DM1 585 aa9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 OSBPL10Q9BXB5 764 aa9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 PLEKHA5Q9HAU0 1116 aa9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 SLC38A7Q9NVC3 462 aa9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 TMEM161AQ9NX61 479 aa9.36□□□□□ -0.91
SHROOM4-203ENST00000460112 ZNF229Q9UJW7 825 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms