RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 MRPL9Q9BYD2 267 aaKnown RBP14.03□□□□□ -0.16
COL18A1-206ENST00000459895 ZNF576Q9H609 170 aa14.03□□□□□ -0.16
COL18A1-206ENST00000459895 CWH43Q9H720 699 aa14.03□□□□□ -0.16
COL18A1-206ENST00000459895 KLK14Q9P0G3 267 aa14.03□□□□□ -0.16
COL18A1-206ENST00000459895 PARP2Q9UGN5 583 aa14.03□□□□□ -0.16
COL18A1-206ENST00000459895 REV3LO60673 3130 aa14.02□□□□□ -0.16
COL18A1-206ENST00000459895 PTGESO14684 152 aa14.02□□□□□ -0.17
COL18A1-206ENST00000459895 CLDN3O15551 220 aa14.02□□□□□ -0.17
COL18A1-206ENST00000459895 POMCP01189 267 aa14.02□□□□□ -0.17
COL18A1-206ENST00000459895 CXCL8P10145 99 aa14.02□□□□□ -0.17
COL18A1-206ENST00000459895 ADSSP30520 456 aa14.02□□□□□ -0.17
COL18A1-206ENST00000459895 KCNB1Q14721 858 aa14.02□□□□□ -0.17
COL18A1-206ENST00000459895 GLRA4Q5JXX5 417 aa14.02□□□□□ -0.17
COL18A1-206ENST00000459895 APBB1IPQ7Z5R6 666 aaPredicted RBP14.02□□□□□ -0.17
COL18A1-206ENST00000459895 THNSL1Q8IYQ7 743 aa14.02□□□□□ -0.17
COL18A1-206ENST00000459895 SMYD4Q8IYR2 804 aaPredicted RBP14.02□□□□□ -0.17
COL18A1-206ENST00000459895 URGCPQ8TCY9 931 aa14.02□□□□□ -0.17
COL18A1-206ENST00000459895 GPT2Q8TD30 523 aa14.02□□□□□ -0.17
COL18A1-206ENST00000459895 CLP1Q92989 425 aaKnown RBP14.02□□□□□ -0.17
COL18A1-206ENST00000459895 TGS1Q96RS0 853 aaKnown RBP14.02□□□□□ -0.17
COL18A1-206ENST00000459895 RPS6KC1Q96S38 1066 aa14.02□□□□□ -0.17
COL18A1-206ENST00000459895 CBWD1Q9BRT8 395 aa14.02□□□□□ -0.17
COL18A1-206ENST00000459895 TCHPQ9BT92 498 aa14.02□□□□□ -0.17
COL18A1-206ENST00000459895 MSTO1Q9BUK6 570 aa14.02□□□□□ -0.17
COL18A1-206ENST00000459895 EXOC7Q9UPT5 735 aa14.02□□□□□ -0.17
COL18A1-206ENST00000459895 GIT1Q9Y2X7 761 aa14.02□□□□□ -0.17
COL18A1-206ENST00000459895 PCDHB13Q9Y5F0 798 aa14.02□□□□□ -0.17
COL18A1-206ENST00000459895 A0A0B4J269 797 aa14.01□□□□□ -0.17
COL18A1-206ENST00000459895 ZC3H11AO75152 810 aaKnown RBP eCLIP14.01□□□□□ -0.17
COL18A1-206ENST00000459895 ERVK-21P61565 698 aa14.01□□□□□ -0.17
COL18A1-206ENST00000459895 GRIK3Q13003 919 aa14.01□□□□□ -0.17
COL18A1-206ENST00000459895 GPR153Q6NV75 609 aa14.01□□□□□ -0.17
COL18A1-206ENST00000459895 SYCP3Q8IZU3 236 aa14.01□□□□□ -0.17
COL18A1-206ENST00000459895 COLGALT1Q8NBJ5 622 aa14.01□□□□□ -0.17
COL18A1-206ENST00000459895 GSTCDQ8NEC7 633 aa14.01□□□□□ -0.17
COL18A1-206ENST00000459895 ZSWIM2Q8NEG5 633 aa14.01□□□□□ -0.17
COL18A1-206ENST00000459895 SPATA20Q8TB22 786 aa14.01□□□□□ -0.17
COL18A1-206ENST00000459895 ZNF507Q8TCN5 953 aa14.01□□□□□ -0.17
COL18A1-206ENST00000459895 ARNTL2Q8WYA1 636 aa14.01□□□□□ -0.17
COL18A1-206ENST00000459895 POMGNT1Q8WZA1 660 aa14.01□□□□□ -0.17
COL18A1-206ENST00000459895 SMARCE1Q969G3 411 aa14.01□□□□□ -0.17
COL18A1-206ENST00000459895 CCDC47Q96A33 483 aaKnown RBP14.01□□□□□ -0.17
COL18A1-206ENST00000459895 SAAL1Q96ER3 474 aa14.01□□□□□ -0.17
COL18A1-206ENST00000459895 CCDC94Q9BW85 323 aaPredicted RBP14.01□□□□□ -0.17
COL18A1-206ENST00000459895 GBP3Q9H0R5 595 aa14.01□□□□□ -0.17
COL18A1-206ENST00000459895 CLSTN2Q9H4D0 955 aa14.01□□□□□ -0.17
COL18A1-206ENST00000459895 TYW1Q9NV66 732 aaKnown RBP14.01□□□□□ -0.17
COL18A1-206ENST00000459895 CACNG4Q9UBN1 327 aa14.01□□□□□ -0.17
COL18A1-206ENST00000459895 DNAJB4Q9UDY4 337 aa14.01□□□□□ -0.17
COL18A1-206ENST00000459895 PCDHA5Q9Y5H7 936 aa14.01□□□□□ -0.17
COL18A1-206ENST00000459895 STYXL1Q9Y6J8 313 aa14.01□□□□□ -0.17
COL18A1-206ENST00000459895 GOLGA6L22H0YM25 854 aa14□□□□□ -0.17
COL18A1-206ENST00000459895 OGTO15294 1046 aa14□□□□□ -0.17
COL18A1-206ENST00000459895 TGFB1I1O43294 461 aa14□□□□□ -0.17
COL18A1-206ENST00000459895 LAG3P18627 525 aa14□□□□□ -0.17
COL18A1-206ENST00000459895 GRIN2CQ14957 1233 aa14□□□□□ -0.17
COL18A1-206ENST00000459895 ENOX2Q16206 610 aaKnown RBP14□□□□□ -0.17
COL18A1-206ENST00000459895 CAMK4Q16566 473 aa14□□□□□ -0.17
COL18A1-206ENST00000459895 EPC2Q52LR7 807 aa14□□□□□ -0.17
COL18A1-206ENST00000459895 ARMCX5Q6P1M9 558 aa14□□□□□ -0.17
COL18A1-206ENST00000459895 TMEM173Q86WV6 379 aaPredicted RBP14□□□□□ -0.17
COL18A1-206ENST00000459895 ZNF280BQ86YH2 543 aa14□□□□□ -0.17
COL18A1-206ENST00000459895 DEFB123Q8N688 67 aa14□□□□□ -0.17
COL18A1-206ENST00000459895 FBXO22Q8NEZ5 403 aa14□□□□□ -0.17
COL18A1-206ENST00000459895 BCL7CQ8WUZ0 217 aaPredicted RBP14□□□□□ -0.17
COL18A1-206ENST00000459895 RSPH1Q8WYR4 309 aa14□□□□□ -0.17
COL18A1-206ENST00000459895 GUCD1Q96NT3 240 aa14□□□□□ -0.17
COL18A1-206ENST00000459895 PRDM12Q9H4Q4 367 aa14□□□□□ -0.17
COL18A1-206ENST00000459895 TMEM206Q9H813 350 aa14□□□□□ -0.17
COL18A1-206ENST00000459895 UBN1Q9NPG3 1134 aa14□□□□□ -0.17
COL18A1-206ENST00000459895 AGPAT3Q9NRZ7 376 aa14□□□□□ -0.17
COL18A1-206ENST00000459895 MIOSQ9NXC5 875 aa14□□□□□ -0.17
COL18A1-206ENST00000459895 HOOK1Q9UJC3 728 aaKnown RBP14□□□□□ -0.17
COL18A1-206ENST00000459895 MAN1B1Q9UKM7 699 aa14□□□□□ -0.17
COL18A1-206ENST00000459895 AGO2Q9UKV8 859 aaKnown RBP14□□□□□ -0.17
COL18A1-206ENST00000459895 DDHD2O94830 711 aa13.99□□□□□ -0.17
COL18A1-206ENST00000459895 CSPG5O95196 566 aa13.99□□□□□ -0.17
COL18A1-206ENST00000459895 SMC2O95347 1197 aa13.99□□□□□ -0.17
COL18A1-206ENST00000459895 YARSP54577 528 aaKnown RBP13.99□□□□□ -0.17
COL18A1-206ENST00000459895 WNT7BP56706 349 aa13.99□□□□□ -0.17
COL18A1-206ENST00000459895 RNASELQ05823 741 aaKnown RBP13.99□□□□□ -0.17
COL18A1-206ENST00000459895 DSC1Q08554 894 aa13.99□□□□□ -0.17
COL18A1-206ENST00000459895 PSMD2Q13200 908 aa13.99□□□□□ -0.17
COL18A1-206ENST00000459895 NAB2Q15742 525 aa13.99□□□□□ -0.17
COL18A1-206ENST00000459895 SPOUT1Q5T280 376 aaKnown RBP13.99□□□□□ -0.17
COL18A1-206ENST00000459895 ELOA2Q8IYF1 753 aaPredicted RBP13.99□□□□□ -0.17
COL18A1-206ENST00000459895 TMEM130Q8N3G9 435 aa13.99□□□□□ -0.17
COL18A1-206ENST00000459895 SAMD11Q96NU1 681 aa13.99□□□□□ -0.17
COL18A1-206ENST00000459895 GSDMAQ96QA5 445 aa13.99□□□□□ -0.17
COL18A1-206ENST00000459895 KCTD10Q9H3F6 313 aa13.99□□□□□ -0.17
COL18A1-206ENST00000459895 NRDE2Q9H7Z3 1164 aa13.99□□□□□ -0.17
COL18A1-206ENST00000459895 TOPORSQ9NS56 1045 aaPredicted RBP13.99□□□□□ -0.17
COL18A1-206ENST00000459895 RMND1Q9NWS8 449 aa13.99□□□□□ -0.17
COL18A1-206ENST00000459895 CNTN3Q9P232 1028 aa13.99□□□□□ -0.17
COL18A1-206ENST00000459895 CPSF3Q9UKF6 684 aaKnown RBP13.99□□□□□ -0.17
COL18A1-206ENST00000459895 MAPK8IP1Q9UQF2 711 aa13.99□□□□□ -0.17
COL18A1-206ENST00000459895 RWDD3Q9Y3V2 267 aa13.99□□□□□ -0.17
COL18A1-206ENST00000459895 VWA8A3KMH1 1905 aa13.98□□□□□ -0.17
COL18A1-206ENST00000459895 GOLGA8IPA6NC78 632 aa13.98□□□□□ -0.17
COL18A1-206ENST00000459895 GOLGA8JA6NMD2 632 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms