RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 DNAJB1P25685 340 aa17.67■□□□□ 0.42
CD28-203ENST00000458610 NMT1P30419 496 aaKnown RBP17.67■□□□□ 0.42
CD28-203ENST00000458610 PBX3P40426 434 aa17.67■□□□□ 0.42
CD28-203ENST00000458610 AFF1P51825 1210 aaKnown RBP17.67■□□□□ 0.42
CD28-203ENST00000458610 MRPS5P82675 430 aaKnown RBP17.67■□□□□ 0.42
CD28-203ENST00000458610 MCL1Q07820 350 aa17.67■□□□□ 0.42
CD28-203ENST00000458610 DSC1Q08554 894 aa17.67■□□□□ 0.42
CD28-203ENST00000458610 TUSC3Q13454 348 aa17.67■□□□□ 0.42
CD28-203ENST00000458610 CAMK1Q14012 370 aa17.67■□□□□ 0.42
CD28-203ENST00000458610 NOLC1Q14978 699 aaKnown RBP eCLIP17.67■□□□□ 0.42
CD28-203ENST00000458610 CNNM4Q6P4Q7 775 aa17.67■□□□□ 0.42
CD28-203ENST00000458610 TMEM87AQ8NBN3 555 aa17.67■□□□□ 0.42
CD28-203ENST00000458610 GSTCDQ8NEC7 633 aa17.67■□□□□ 0.42
CD28-203ENST00000458610 CDCA3Q99618 268 aaPredicted RBP17.67■□□□□ 0.42
CD28-203ENST00000458610 C7orf25Q9BPX7 421 aa17.67■□□□□ 0.42
CD28-203ENST00000458610 TCF25Q9BQ70 676 aa17.67■□□□□ 0.42
CD28-203ENST00000458610 TLE6Q9H808 572 aa17.67■□□□□ 0.42
CD28-203ENST00000458610 SLC38A7Q9NVC3 462 aa17.67■□□□□ 0.42
CD28-203ENST00000458610 MIOSQ9NXC5 875 aa17.67■□□□□ 0.42
CD28-203ENST00000458610 ANKFY1Q9P2R3 1169 aa17.67■□□□□ 0.42
CD28-203ENST00000458610 DNAJB4Q9UDY4 337 aa17.67■□□□□ 0.42
CD28-203ENST00000458610 CIZ1Q9ULV3 898 aaPredicted RBP17.67■□□□□ 0.42
CD28-203ENST00000458610 SSX2IPQ9Y2D8 614 aa17.67■□□□□ 0.42
CD28-203ENST00000458610 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.67■□□□□ 0.42
CD28-203ENST00000458610 PRRC2BQ5JSZ5 2229 aaKnown RBP17.67■□□□□ 0.42
CD28-203ENST00000458610 MYH15Q9Y2K3 1946 aa17.66■□□□□ 0.42
CD28-203ENST00000458610 A0A1W2PQ27 194 aa17.66■□□□□ 0.42
CD28-203ENST00000458610 A0A1W2PQ64 194 aa17.66■□□□□ 0.42
CD28-203ENST00000458610 A0A1W2PQD8 194 aa17.66■□□□□ 0.42
CD28-203ENST00000458610 FRMD3A2A2Y4 597 aa17.66■□□□□ 0.42
CD28-203ENST00000458610 GOLGA6L4A6NEF3 574 aa17.66■□□□□ 0.42
CD28-203ENST00000458610 FSCN2O14926 492 aa17.66■□□□□ 0.42
CD28-203ENST00000458610 SLFN14P0C7P3 912 aa17.66■□□□□ 0.42
CD28-203ENST00000458610 ERVFC1P60507 584 aa17.66■□□□□ 0.42
CD28-203ENST00000458610 ASIC1P78348 528 aa17.66■□□□□ 0.42
CD28-203ENST00000458610 SMC1AQ14683 1233 aaKnown RBP17.66■□□□□ 0.42
CD28-203ENST00000458610 POSTNQ15063 836 aa17.66■□□□□ 0.42
CD28-203ENST00000458610 MAP4K3Q8IVH8 894 aa17.66■□□□□ 0.42
CD28-203ENST00000458610 PABPC5Q96DU9 382 aaKnown RBP17.66■□□□□ 0.42
CD28-203ENST00000458610 CCDC34Q96HJ3 373 aa17.66■□□□□ 0.42
CD28-203ENST00000458610 ACCSQ96QU6 501 aa17.66■□□□□ 0.42
CD28-203ENST00000458610 FIZ1Q96SL8 496 aa17.66■□□□□ 0.42
CD28-203ENST00000458610 TRIM9Q9C026 710 aa17.66■□□□□ 0.42
CD28-203ENST00000458610 LAMA2P24043 3122 aaKnown RBP17.66■□□□□ 0.42
CD28-203ENST00000458610 GCNT3O95395 438 aa17.65■□□□□ 0.42
CD28-203ENST00000458610 CXCL14O95715 111 aa17.65■□□□□ 0.42
CD28-203ENST00000458610 CLTAP09496 248 aa17.65■□□□□ 0.42
CD28-203ENST00000458610 HARSP12081 509 aaKnown RBP17.65■□□□□ 0.42
CD28-203ENST00000458610 IRS1P35568 1242 aa17.65■□□□□ 0.42
CD28-203ENST00000458610 OSTNP61366 133 aa17.65■□□□□ 0.42
CD28-203ENST00000458610 VPS52Q8N1B4 723 aa17.65■□□□□ 0.42
CD28-203ENST00000458610 MRPL43Q8N983 215 aaKnown RBP17.65■□□□□ 0.42
CD28-203ENST00000458610 STAMQ92783 540 aa17.65■□□□□ 0.42
CD28-203ENST00000458610 ZBTB45Q96K62 511 aaPredicted RBP17.65■□□□□ 0.42
CD28-203ENST00000458610 TSPAN18Q96SJ8 248 aa17.65■□□□□ 0.42
CD28-203ENST00000458610 IGFLR1Q9H665 355 aa17.65■□□□□ 0.42
CD28-203ENST00000458610 TMEM206Q9H813 350 aa17.65■□□□□ 0.42
CD28-203ENST00000458610 PLEKHA5Q9HAU0 1116 aa17.65■□□□□ 0.42
CD28-203ENST00000458610 COL4A4P53420 1690 aaPredicted RBP17.64■□□□□ 0.42
CD28-203ENST00000458610 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.64■□□□□ 0.41
CD28-203ENST00000458610 A0A1B0GVL5 298 aa17.64■□□□□ 0.41
CD28-203ENST00000458610 PVALEFA0A1B0GWK0 134 aa17.64■□□□□ 0.41
CD28-203ENST00000458610 ABLIM1O14639 778 aa17.64■□□□□ 0.41
CD28-203ENST00000458610 TADA2AO75478 443 aa17.64■□□□□ 0.41
CD28-203ENST00000458610 CSPG5O95196 566 aa17.64■□□□□ 0.41
CD28-203ENST00000458610 MYL1P05976 194 aa17.64■□□□□ 0.41
CD28-203ENST00000458610 SRGAP2BP0DMP2 458 aa17.64■□□□□ 0.41
CD28-203ENST00000458610 PFKFB1P16118 471 aa17.64■□□□□ 0.41
CD28-203ENST00000458610 SYKP43405 635 aa17.64■□□□□ 0.41
CD28-203ENST00000458610 PUS10Q3MIT2 529 aaKnown RBP17.64■□□□□ 0.41
CD28-203ENST00000458610 ZC2HC1CQ53FD0 456 aaPredicted RBP17.64■□□□□ 0.41
CD28-203ENST00000458610 XKR4Q5GH76 650 aa17.64■□□□□ 0.41
CD28-203ENST00000458610 EP400NLQ6ZTU2 488 aa17.64■□□□□ 0.41
CD28-203ENST00000458610 SYCP3Q8IZU3 236 aa17.64■□□□□ 0.41
CD28-203ENST00000458610 DDX27Q96GQ7 796 aaKnown RBP17.64■□□□□ 0.41
CD28-203ENST00000458610 UROC1Q96N76 676 aa17.64■□□□□ 0.41
CD28-203ENST00000458610 MSTO1Q9BUK6 570 aa17.64■□□□□ 0.41
CD28-203ENST00000458610 UBE2ZQ9H832 354 aaPredicted RBP17.64■□□□□ 0.41
CD28-203ENST00000458610 PRDM6Q9NQX0 595 aa17.64■□□□□ 0.41
CD28-203ENST00000458610 TBC1D7Q9P0N9 293 aa17.64■□□□□ 0.41
CD28-203ENST00000458610 PRG3Q9Y2Y8 225 aaPredicted RBP17.64■□□□□ 0.41
CD28-203ENST00000458610 CHD9Q3L8U1 2897 aa17.63■□□□□ 0.41
CD28-203ENST00000458610 MYH11P35749 1972 aa17.63■□□□□ 0.41
CD28-203ENST00000458610 FAM237AA0A1B0GTK4 181 aa17.63■□□□□ 0.41
CD28-203ENST00000458610 SMIM28A0A1B0GU29 152 aa17.63■□□□□ 0.41
CD28-203ENST00000458610 PTGESO14684 152 aa17.63■□□□□ 0.41
CD28-203ENST00000458610 OGTO15294 1046 aa17.63■□□□□ 0.41
CD28-203ENST00000458610 CTSAP10619 480 aa17.63■□□□□ 0.41
CD28-203ENST00000458610 KCNE1P15382 129 aa17.63■□□□□ 0.41
CD28-203ENST00000458610 CA8P35219 290 aa17.63■□□□□ 0.41
CD28-203ENST00000458610 NRIP1P48552 1158 aa17.63■□□□□ 0.41
CD28-203ENST00000458610 HYAL1Q12794 435 aa17.63■□□□□ 0.41
CD28-203ENST00000458610 L1TD1Q5T7N2 865 aaKnown RBP17.63■□□□□ 0.41
CD28-203ENST00000458610 PLPP4Q5VZY2 271 aa17.63■□□□□ 0.41
CD28-203ENST00000458610 ALKAL1Q6UXT8 129 aa17.63■□□□□ 0.41
CD28-203ENST00000458610 UNC13DQ70J99 1090 aa17.63■□□□□ 0.41
CD28-203ENST00000458610 CD302Q8IX05 232 aa17.63■□□□□ 0.41
CD28-203ENST00000458610 EFHBQ8N7U6 833 aa17.63■□□□□ 0.41
CD28-203ENST00000458610 ASB2Q96Q27 587 aa17.63■□□□□ 0.41
CD28-203ENST00000458610 STRA6Q9BX79 667 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms