RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 MAGEA4P43358 317 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 COASYQ13057 564 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 FAM47AQ5JRC9 791 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 TMC3Q7Z5M5 1100 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 CDR2LQ86X02 465 aaPredicted RBP5.29□□□□□ -1.56
PCDH9-203ENST00000456367 ZBED8Q8IZ13 594 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 OR9Q1Q8NGQ5 310 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 DHX38Q92620 1227 aaKnown RBP5.29□□□□□ -1.56
PCDH9-203ENST00000456367 CNKSR1Q969H4 720 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 DACT3Q96B18 629 aaPredicted RBP5.29□□□□□ -1.56
PCDH9-203ENST00000456367 DGCR14Q96DF8 476 aaKnown RBP5.29□□□□□ -1.56
PCDH9-203ENST00000456367 NDEL1Q9GZM8 345 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 GIMAP4Q9NUV9 329 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 HEY2Q9UBP5 337 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 SUN2Q9UH99 717 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 RSL24D1Q9UHA3 163 aaKnown RBP5.29□□□□□ -1.56
PCDH9-203ENST00000456367 NIP7Q9Y221 180 aaKnown RBP eCLIP5.29□□□□□ -1.56
PCDH9-203ENST00000456367 CDY2AQ9Y6F7 541 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 CDY1Q9Y6F8 540 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 SALL3Q9BXA9 1300 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 MLH3Q9UHC1 1453 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 A6NJR5 290 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 ZBBXA8MT70 800 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 H3BRJ5 948 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 PIK3R2O00459 728 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 LRRN2O75325 713 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 GLI1P08151 1106 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 CDH2P19022 906 aaPredicted RBP5.28□□□□□ -1.56
PCDH9-203ENST00000456367 SARSP49591 514 aaKnown RBP5.28□□□□□ -1.56
PCDH9-203ENST00000456367 GALCP54803 685 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 LRRC24Q50LG9 513 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 LVRNQ6Q4G3 990 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 NANOGNBQ7Z5D8 188 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 CREG2Q8IUH2 290 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 RCOR2Q8IZ40 523 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 TPCN2Q8NHX9 752 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 USP33Q8TEY7 942 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 AGPAT1Q99943 283 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 NUP85Q9BW27 656 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 ARHGEF10LQ9HCE6 1279 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 DIABLOQ9NR28 239 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 METTL5Q9NRN9 209 aaKnown RBP5.28□□□□□ -1.56
PCDH9-203ENST00000456367 ADA2Q9NZK5 511 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 ABCA9Q8IUA7 1624 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 E9PCH4 1651 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 A2ML1A8K2U0 1454 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 KANSL1LA0AUZ9 987 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 GOLGA8MH3BSY2 632 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 CHMP2AO43633 222 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 PSMG1O95456 288 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 CTDNEP1O95476 244 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 ZBED1O96006 694 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 GCP02774 474 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 FDPSP14324 419 aaKnown RBP5.28□□□□□ -1.56
PCDH9-203ENST00000456367 KLRC1P26715 233 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 SMARCA1P28370 1054 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 MTTPP55157 894 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 C21orf59P57076 290 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 PTENP60484 403 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 GPS1Q13098 491 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 ZNF211Q13398 564 aaPredicted RBP5.28□□□□□ -1.56
PCDH9-203ENST00000456367 DRAP1Q14919 205 aaPredicted RBP5.28□□□□□ -1.56
PCDH9-203ENST00000456367 MTFR1Q15390 333 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 TTC27Q6P3X3 843 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 AAGABQ6PD74 315 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 TTC33Q6PID6 262 aaPredicted RBP5.28□□□□□ -1.56
PCDH9-203ENST00000456367 STOX1Q6ZVD7 989 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 LPCAT2Q7L5N7 544 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 METTL13Q8N6R0 699 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 FBXL13Q8NEE6 735 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 ZNF496Q96IT1 587 aaPredicted RBP5.28□□□□□ -1.56
PCDH9-203ENST00000456367 PHF20Q9BVI0 1012 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 MRPL1Q9BYD6 325 aaKnown RBP5.28□□□□□ -1.56
PCDH9-203ENST00000456367 ZWILCHQ9H900 591 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 CYP4F11Q9HBI6 524 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 KIAA1586Q9HCI6 787 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 DNAJC17Q9NVM6 304 aaKnown RBP5.28□□□□□ -1.56
PCDH9-203ENST00000456367 PCDHB4Q9Y5E5 795 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 MADDQ8WXG6 1647 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 ARHGEF40Q8TER5 1519 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 ANKARQ7Z5J8 1434 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 ERVV-2B6SEH9 535 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 TNNC2P02585 160 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 C4BPBP20851 252 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 CDC27P30260 824 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 MAGEA8P43361 318 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 EIF2B2P49770 351 aaKnown RBP5.28□□□□□ -1.56
PCDH9-203ENST00000456367 DRG2P55039 364 aaKnown RBP5.28□□□□□ -1.56
PCDH9-203ENST00000456367 NR1H2P55055 460 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 GEMIN4P57678 1058 aaKnown RBP5.28□□□□□ -1.56
PCDH9-203ENST00000456367 ABCE1P61221 599 aaKnown RBP5.28□□□□□ -1.56
PCDH9-203ENST00000456367 MRPL28Q13084 256 aaKnown RBP5.28□□□□□ -1.56
PCDH9-203ENST00000456367 DNAJC3Q13217 504 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 SURF1Q15526 300 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 KBTBD12Q3ZCT8 623 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 CCDC153Q494R4 210 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 AASDHQ4L235 1098 aaPredicted RBP5.28□□□□□ -1.56
PCDH9-203ENST00000456367 BRDTQ58F21 947 aaPredicted RBP5.28□□□□□ -1.56
PCDH9-203ENST00000456367 SPOPLQ6IQ16 392 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 MTHFD1LQ6UB35 978 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms