RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 TYROBPO43914 113 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 FGRP09769 529 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 ALAS1P13196 640 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 STT3AP46977 705 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 PABPC4Q13310 644 aaKnown RBP eCLIP4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 PRPF4BQ13523 1007 aaKnown RBP4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 MTFR1Q15390 333 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 CCDC57Q2TAC2 916 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 TXNRD3NBQ6F5E7 133 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 MICALCLQ6ZW33 695 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 LRRC6Q86X45 466 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 FIZ1Q96SL8 496 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 MAK16Q9BXY0 300 aaKnown RBP4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 TRIM4Q9C037 500 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 DNAJC18Q9H819 358 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 PSTPIP2Q9H939 334 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 PARP4Q9UKK3 1724 aaKnown RBP4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 ABCB11O95342 1321 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 PCDH11YQ9BZA8 1340 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 SPTBP11277 2137 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 A6NL46 340 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 TMEM110-MUSTN1A8MSY1 372 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 FOXN3O00409 490 aaPredicted RBP4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 CYB561D2O14569 222 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 RGS16O15492 202 aaPredicted RBP4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 EDF1O60869 148 aaKnown RBP4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 CDKL5O76039 1030 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 GSRP00390 522 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 MCM3P25205 808 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 RPA3P35244 121 aaPredicted RBP4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 SLC10A2Q12908 348 aaPredicted RBP4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 TRIM28Q13263 835 aaKnown RBP4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 PSMD6Q15008 389 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 MSS51Q4VC12 460 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 TAF1BQ53T94 588 aaPredicted RBP4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 ZC3H18Q86VM9 953 aaKnown RBP4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 CCDC24Q8N4L8 307 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 SPATA5Q8NB90 893 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 SH3TC2Q8TF17 1288 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 C1orf54Q8WWF1 131 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 CD101Q93033 1021 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 FEM1CQ96JP0 617 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 PANX3Q96QZ0 392 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 MMP19Q99542 508 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 FHDC1Q9C0D6 1143 aaPredicted RBP4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 EPS8L2Q9H6S3 715 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 NLRP2Q9NX02 1062 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 CHCHD3Q9NX63 227 aaKnown RBP4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 SLC17A7Q9P2U7 560 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 ARMCX3Q9UH62 379 aaPredicted RBP4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 ZBTB1Q9Y2K1 713 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 CFAP73A6NFT4 308 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 RASGRF2O14827 1237 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 RARGP13631 454 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 SERPINB3P29508 390 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 C1orf220Q5T0J3 134 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 USP17L6PQ6QN14 398 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 DTHD1Q6ZMT9 781 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 RUFY4Q6ZNE9 571 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 CAPN12Q6ZSI9 719 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 BTLAQ7Z6A9 289 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 BLIDQ8IZY5 108 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 OPTNQ96CV9 577 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 ARL2BPQ9Y2Y0 163 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 DAAM1Q9Y4D1 1078 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 WDR91A4D1P6 747 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 GOLGA8RI6L899 631 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 TRAF5O00463 557 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 HIP1RO75146 1068 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 DLDP09622 509 aaKnown RBP4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 TRIM49P0CI25 452 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 TRIM49CP0CI26 452 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 KCNA3P22001 575 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 RXRBP28702 533 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 ZNF131P52739 623 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 DRG2P55039 364 aaKnown RBP4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 MRPS35P82673 323 aaKnown RBP4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 PARP6Q2NL67 630 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 SAPCD2Q86UD0 394 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 IFNLR1Q8IU57 520 aaPredicted RBP4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 RBM12BQ8IXT5 1001 aaKnown RBP4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 FAM110BQ8TC76 370 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 ZSCAN10Q96SZ4 725 aaPredicted RBP4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 NEURL2Q9BR09 285 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 OXCT2Q9BYC2 517 aaPredicted RBP4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 SHCBP1LQ9BZQ2 653 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 BRD8Q9H0E9 1235 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 RAB17Q9H0T7 212 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 DCP1AQ9NPI6 582 aaPredicted RBP4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 CHMP2BQ9UQN3 213 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 LRCH1Q9Y2L9 728 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 SPATA31A5Q5VU36 1347 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 SPATA31A7Q8IWB4 1347 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 FAM186AA6NE01 2351 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 ITGB4P16144 1822 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 USO1O60763 962 aaKnown RBP4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 ZBED4O75132 1171 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 BAG3O95817 575 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 ETS1P14921 441 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms