RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 P2RX5Q93086 422 aa30.61■■■□□ 2.49
SMARCC1-203ENST00000454240 IKZF4Q9H2S9 585 aa30.61■■■□□ 2.49
SMARCC1-203ENST00000454240 NRDE2Q9H7Z3 1164 aa30.61■■■□□ 2.49
SMARCC1-203ENST00000454240 AAASQ9NRG9 546 aa30.61■■■□□ 2.49
SMARCC1-203ENST00000454240 GDAQ9Y2T3 454 aa30.61■■■□□ 2.49
SMARCC1-203ENST00000454240 H3BNC9 293 aa30.6■■■□□ 2.49
SMARCC1-203ENST00000454240 EIF3DO15371 548 aaKnown RBP eCLIP30.6■■■□□ 2.49
SMARCC1-203ENST00000454240 LPXNO60711 386 aa30.6■■■□□ 2.49
SMARCC1-203ENST00000454240 PRPF40AO75400 957 aaKnown RBP30.6■■■□□ 2.49
SMARCC1-203ENST00000454240 POMCP01189 267 aa30.6■■■□□ 2.49
SMARCC1-203ENST00000454240 RPN1P04843 607 aaKnown RBP30.6■■■□□ 2.49
SMARCC1-203ENST00000454240 COLGALT1Q8NBJ5 622 aa30.6■■■□□ 2.49
SMARCC1-203ENST00000454240 ZNF507Q8TCN5 953 aa30.6■■■□□ 2.49
SMARCC1-203ENST00000454240 CCDC94Q9BW85 323 aaPredicted RBP30.6■■■□□ 2.49
SMARCC1-203ENST00000454240 PLXNA4Q9HCM2 1894 aa30.59■■■□□ 2.49
SMARCC1-203ENST00000454240 A0A0B4J269 797 aa30.59■■■□□ 2.49
SMARCC1-203ENST00000454240 DDHD2O94830 711 aa30.59■■■□□ 2.49
SMARCC1-203ENST00000454240 HARSP12081 509 aaKnown RBP30.59■■■□□ 2.49
SMARCC1-203ENST00000454240 MATR3P43243 847 aaKnown RBP eCLIP30.59■■■□□ 2.49
SMARCC1-203ENST00000454240 SCNN1GP51170 649 aa30.59■■■□□ 2.49
SMARCC1-203ENST00000454240 RNASELQ05823 741 aaKnown RBP30.59■■■□□ 2.49
SMARCC1-203ENST00000454240 PSMD2Q13200 908 aa30.59■■■□□ 2.49
SMARCC1-203ENST00000454240 POSTNQ15063 836 aa30.59■■■□□ 2.49
SMARCC1-203ENST00000454240 ZNF280BQ86YH2 543 aa30.59■■■□□ 2.49
SMARCC1-203ENST00000454240 THNSL1Q8IYQ7 743 aa30.59■■■□□ 2.49
SMARCC1-203ENST00000454240 GDPD5Q8WTR4 605 aa30.59■■■□□ 2.49
SMARCC1-203ENST00000454240 MYLIPQ8WY64 445 aa30.59■■■□□ 2.49
SMARCC1-203ENST00000454240 TMEM206Q9H813 350 aa30.59■■■□□ 2.49
SMARCC1-203ENST00000454240 SLC39A2Q9NP94 309 aa30.59■■■□□ 2.49
SMARCC1-203ENST00000454240 EXOC1Q9NV70 894 aa30.59■■■□□ 2.49
SMARCC1-203ENST00000454240 PCDHB12Q9Y5F1 795 aa30.59■■■□□ 2.49
SMARCC1-203ENST00000454240 TISP43B9A030 160 aa30.58■■■□□ 2.49
SMARCC1-203ENST00000454240 HOXD13P35453 343 aa30.58■■■□□ 2.49
SMARCC1-203ENST00000454240 OSTNP61366 133 aa30.58■■■□□ 2.49
SMARCC1-203ENST00000454240 ADGRE1Q14246 886 aa30.58■■■□□ 2.49
SMARCC1-203ENST00000454240 SLFN12LQ6IEE8 588 aa30.58■■■□□ 2.49
SMARCC1-203ENST00000454240 KCNT2Q6UVM3 1135 aa30.58■■■□□ 2.49
SMARCC1-203ENST00000454240 ELOA2Q8IYF1 753 aaPredicted RBP30.58■■■□□ 2.49
SMARCC1-203ENST00000454240 ACAP3Q96P50 834 aa30.58■■■□□ 2.49
SMARCC1-203ENST00000454240 C11orf84Q9BUA3 381 aaPredicted RBP30.58■■■□□ 2.49
SMARCC1-203ENST00000454240 CXCL16Q9H2A7 254 aa30.58■■■□□ 2.49
SMARCC1-203ENST00000454240 FAM189A1O60320 539 aa30.57■■■□□ 2.48
SMARCC1-203ENST00000454240 B4GALT3O60512 393 aa30.57■■■□□ 2.48
SMARCC1-203ENST00000454240 BCAR1P56945 870 aa30.57■■■□□ 2.48
SMARCC1-203ENST00000454240 GPM6BQ13491 265 aa30.57■■■□□ 2.48
SMARCC1-203ENST00000454240 ALKAL1Q6UXT8 129 aa30.57■■■□□ 2.48
SMARCC1-203ENST00000454240 SYCP3Q8IZU3 236 aa30.57■■■□□ 2.48
SMARCC1-203ENST00000454240 KLHL23Q8NBE8 558 aa30.57■■■□□ 2.48
SMARCC1-203ENST00000454240 SCFD1Q8WVM8 642 aa30.57■■■□□ 2.48
SMARCC1-203ENST00000454240 ZNF558Q96NG5 402 aa30.57■■■□□ 2.48
SMARCC1-203ENST00000454240 RPS6KC1Q96S38 1066 aa30.57■■■□□ 2.48
SMARCC1-203ENST00000454240 GAS2L1Q99501 681 aaPredicted RBP30.57■■■□□ 2.48
SMARCC1-203ENST00000454240 UBE4BO95155 1302 aa30.56■■■□□ 2.48
SMARCC1-203ENST00000454240 PTGESO14684 152 aa30.56■■■□□ 2.48
SMARCC1-203ENST00000454240 OGTO15294 1046 aa30.56■■■□□ 2.48
SMARCC1-203ENST00000454240 RHOBTB3O94955 611 aa30.56■■■□□ 2.48
SMARCC1-203ENST00000454240 POU3F3P20264 500 aaPredicted RBP30.56■■■□□ 2.48
SMARCC1-203ENST00000454240 ADSSP30520 456 aa30.56■■■□□ 2.48
SMARCC1-203ENST00000454240 YARSP54577 528 aaKnown RBP30.56■■■□□ 2.48
SMARCC1-203ENST00000454240 DSC1Q08554 894 aa30.56■■■□□ 2.48
SMARCC1-203ENST00000454240 GRIK3Q13003 919 aa30.56■■■□□ 2.48
SMARCC1-203ENST00000454240 STK4Q13043 487 aa30.56■■■□□ 2.48
SMARCC1-203ENST00000454240 KYAT1Q16773 422 aa30.56■■■□□ 2.48
SMARCC1-203ENST00000454240 SEZ6Q53EL9 994 aa30.56■■■□□ 2.48
SMARCC1-203ENST00000454240 XKR4Q5GH76 650 aa30.56■■■□□ 2.48
SMARCC1-203ENST00000454240 TOPORSQ9NS56 1045 aaPredicted RBP30.56■■■□□ 2.48
SMARCC1-203ENST00000454240 DNAJB4Q9UDY4 337 aa30.56■■■□□ 2.48
SMARCC1-203ENST00000454240 PLAGL2Q9UPG8 496 aa30.56■■■□□ 2.48
SMARCC1-203ENST00000454240 PDCD11Q14690 1871 aaKnown RBP30.56■■■□□ 2.48
SMARCC1-203ENST00000454240 MEFVO15553 781 aaPredicted RBP30.55■■■□□ 2.48
SMARCC1-203ENST00000454240 ZC3H11AO75152 810 aaKnown RBP eCLIP30.55■■■□□ 2.48
SMARCC1-203ENST00000454240 GALTP07902 379 aa30.55■■■□□ 2.48
SMARCC1-203ENST00000454240 PBX3P40426 434 aa30.55■■■□□ 2.48
SMARCC1-203ENST00000454240 PNOCQ13519 176 aa30.55■■■□□ 2.48
SMARCC1-203ENST00000454240 KCNB1Q14721 858 aa30.55■■■□□ 2.48
SMARCC1-203ENST00000454240 BMT2Q1RMZ1 405 aa30.55■■■□□ 2.48
SMARCC1-203ENST00000454240 KIAA0895Q8NCT3 520 aa30.55■■■□□ 2.48
SMARCC1-203ENST00000454240 GBP4Q96PP9 640 aa30.55■■■□□ 2.48
SMARCC1-203ENST00000454240 FAM193BQ96PV7 902 aaPredicted RBP30.55■■■□□ 2.48
SMARCC1-203ENST00000454240 MSTO1Q9BUK6 570 aa30.55■■■□□ 2.48
SMARCC1-203ENST00000454240 GBP3Q9H0R5 595 aa30.55■■■□□ 2.48
SMARCC1-203ENST00000454240 CARNS1A5YM72 827 aa30.54■■■□□ 2.48
SMARCC1-203ENST00000454240 KINO60870 393 aaKnown RBP30.54■■■□□ 2.48
SMARCC1-203ENST00000454240 ITGB1P05556 798 aa30.54■■■□□ 2.48
SMARCC1-203ENST00000454240 CLTAP09496 248 aa30.54■■■□□ 2.48
SMARCC1-203ENST00000454240 ALDH7A1P49419 539 aaKnown RBP30.54■■■□□ 2.48
SMARCC1-203ENST00000454240 COLGALT2Q8IYK4 626 aa30.54■■■□□ 2.48
SMARCC1-203ENST00000454240 POMGNT1Q8WZA1 660 aa30.54■■■□□ 2.48
SMARCC1-203ENST00000454240 CCDC47Q96A33 483 aaKnown RBP30.54■■■□□ 2.48
SMARCC1-203ENST00000454240 TMEM175Q9BSA9 504 aa30.54■■■□□ 2.48
SMARCC1-203ENST00000454240 ATG2AQ2TAZ0 1938 aa30.53■■■□□ 2.48
SMARCC1-203ENST00000454240 GRM6O15303 877 aa30.53■■■□□ 2.48
SMARCC1-203ENST00000454240 FGF18O76093 207 aa30.53■■■□□ 2.48
SMARCC1-203ENST00000454240 THP07101 528 aa30.53■■■□□ 2.48
SMARCC1-203ENST00000454240 GARTP22102 1010 aa30.53■■■□□ 2.48
SMARCC1-203ENST00000454240 PPM1AP35813 382 aa30.53■■■□□ 2.48
SMARCC1-203ENST00000454240 TNFSF9P41273 254 aa30.53■■■□□ 2.48
SMARCC1-203ENST00000454240 NAB2Q15742 525 aa30.53■■■□□ 2.48
SMARCC1-203ENST00000454240 SLC10A6Q3KNW5 377 aa30.53■■■□□ 2.48
SMARCC1-203ENST00000454240 ZBTB41Q5SVQ8 909 aa30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms