RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 HOXD13P35453 343 aa15.94■□□□□ 0.14
NCKIPSD-207ENST00000453349 MLH1P40692 756 aa15.94■□□□□ 0.14
NCKIPSD-207ENST00000453349 ISM2Q6H9L7 571 aa15.94■□□□□ 0.14
NCKIPSD-207ENST00000453349 HS2ST1Q7LGA3 356 aa15.94■□□□□ 0.14
NCKIPSD-207ENST00000453349 LRRC43Q8N309 656 aa15.94■□□□□ 0.14
NCKIPSD-207ENST00000453349 CEP120Q8N960 986 aa15.94■□□□□ 0.14
NCKIPSD-207ENST00000453349 LRCH3Q96II8 777 aa15.94■□□□□ 0.14
NCKIPSD-207ENST00000453349 SAMD11Q96NU1 681 aa15.94■□□□□ 0.14
NCKIPSD-207ENST00000453349 TGS1Q96RS0 853 aaKnown RBP15.94■□□□□ 0.14
NCKIPSD-207ENST00000453349 IKZF4Q9H2S9 585 aa15.94■□□□□ 0.14
NCKIPSD-207ENST00000453349 PCIF1Q9H4Z3 704 aa15.94■□□□□ 0.14
NCKIPSD-207ENST00000453349 MAN1B1Q9UKM7 699 aa15.94■□□□□ 0.14
NCKIPSD-207ENST00000453349 MAPK8IP1Q9UQF2 711 aa15.94■□□□□ 0.14
NCKIPSD-207ENST00000453349 ZMYM2Q9UBW7 1377 aa15.93■□□□□ 0.14
NCKIPSD-207ENST00000453349 TMEM265A0A087WTH1 108 aa15.93■□□□□ 0.14
NCKIPSD-207ENST00000453349 TGFB1I1O43294 461 aa15.93■□□□□ 0.14
NCKIPSD-207ENST00000453349 POMCP01189 267 aa15.93■□□□□ 0.14
NCKIPSD-207ENST00000453349 ADSSP30520 456 aa15.93■□□□□ 0.14
NCKIPSD-207ENST00000453349 TAP1Q03518 808 aa15.93■□□□□ 0.14
NCKIPSD-207ENST00000453349 STIM1Q13586 685 aa15.93■□□□□ 0.14
NCKIPSD-207ENST00000453349 HSP90AA2PQ14568 343 aaPredicted RBP15.93■□□□□ 0.14
NCKIPSD-207ENST00000453349 SEZ6Q53EL9 994 aa15.93■□□□□ 0.14
NCKIPSD-207ENST00000453349 ZNF697Q5TEC3 545 aa15.93■□□□□ 0.14
NCKIPSD-207ENST00000453349 GPR153Q6NV75 609 aa15.93■□□□□ 0.14
NCKIPSD-207ENST00000453349 TMEM192Q8IY95 271 aa15.93■□□□□ 0.14
NCKIPSD-207ENST00000453349 GUF1Q8N442 669 aaKnown RBP15.93■□□□□ 0.14
NCKIPSD-207ENST00000453349 GOLGA5Q8TBA6 731 aa15.93■□□□□ 0.14
NCKIPSD-207ENST00000453349 ZNF576Q9H609 170 aa15.93■□□□□ 0.14
NCKIPSD-207ENST00000453349 RPF1Q9H9Y2 349 aaKnown RBP15.93■□□□□ 0.14
NCKIPSD-207ENST00000453349 PLEKHA5Q9HAU0 1116 aa15.93■□□□□ 0.14
NCKIPSD-207ENST00000453349 MRPL42Q9Y6G3 142 aaKnown RBP15.93■□□□□ 0.14
NCKIPSD-207ENST00000453349 CARNS1A5YM72 827 aa15.92■□□□□ 0.14
NCKIPSD-207ENST00000453349 BIN1O00499 593 aa15.92■□□□□ 0.14
NCKIPSD-207ENST00000453349 PDXKO00764 312 aa15.92■□□□□ 0.14
NCKIPSD-207ENST00000453349 CLIC2O15247 247 aa15.92■□□□□ 0.14
NCKIPSD-207ENST00000453349 INPPL1O15357 1258 aa15.92■□□□□ 0.14
NCKIPSD-207ENST00000453349 CALUO43852 315 aaPredicted RBP15.92■□□□□ 0.14
NCKIPSD-207ENST00000453349 THP07101 528 aa15.92■□□□□ 0.14
NCKIPSD-207ENST00000453349 LAG3P18627 525 aa15.92■□□□□ 0.14
NCKIPSD-207ENST00000453349 PPP1R2P41236 205 aa15.92■□□□□ 0.14
NCKIPSD-207ENST00000453349 PRCPP42785 496 aa15.92■□□□□ 0.14
NCKIPSD-207ENST00000453349 ACOT2P49753 483 aa15.92■□□□□ 0.14
NCKIPSD-207ENST00000453349 SCNN1GP51170 649 aa15.92■□□□□ 0.14
NCKIPSD-207ENST00000453349 ERVK-21P61565 698 aa15.92■□□□□ 0.14
NCKIPSD-207ENST00000453349 POU5F1Q01860 360 aaKnown RBP15.92■□□□□ 0.14
NCKIPSD-207ENST00000453349 COBLL1Q53SF7 1204 aa15.92■□□□□ 0.14
NCKIPSD-207ENST00000453349 LRRC55Q6ZSA7 311 aa15.92■□□□□ 0.14
NCKIPSD-207ENST00000453349 TRIML1Q8N9V2 468 aa15.92■□□□□ 0.14
NCKIPSD-207ENST00000453349 NOC3LQ8WTT2 800 aaKnown RBP15.92■□□□□ 0.14
NCKIPSD-207ENST00000453349 CLP1Q92989 425 aaKnown RBP15.92■□□□□ 0.14
NCKIPSD-207ENST00000453349 ZFP42Q96MM3 310 aa15.92■□□□□ 0.14
NCKIPSD-207ENST00000453349 FAM213AQ9BRX8 229 aa15.92■□□□□ 0.14
NCKIPSD-207ENST00000453349 CWH43Q9H720 699 aa15.92■□□□□ 0.14
NCKIPSD-207ENST00000453349 KIAA1586Q9HCI6 787 aa15.92■□□□□ 0.14
NCKIPSD-207ENST00000453349 AGPAT3Q9NRZ7 376 aa15.92■□□□□ 0.14
NCKIPSD-207ENST00000453349 TBC1D13Q9NVG8 400 aa15.92■□□□□ 0.14
NCKIPSD-207ENST00000453349 MIOSQ9NXC5 875 aa15.92■□□□□ 0.14
NCKIPSD-207ENST00000453349 CPSF3Q9UKF6 684 aaKnown RBP15.92■□□□□ 0.14
NCKIPSD-207ENST00000453349 PCDHB12Q9Y5F1 795 aa15.92■□□□□ 0.14
NCKIPSD-207ENST00000453349 GBF1Q92538 1859 aa15.92■□□□□ 0.14
NCKIPSD-207ENST00000453349 TULP1O00294 542 aaPredicted RBP15.91■□□□□ 0.14
NCKIPSD-207ENST00000453349 EXTL3O43909 919 aa15.91■□□□□ 0.14
NCKIPSD-207ENST00000453349 ALDH2P05091 517 aa15.91■□□□□ 0.14
NCKIPSD-207ENST00000453349 BMPR1AP36894 532 aa15.91■□□□□ 0.14
NCKIPSD-207ENST00000453349 TNFSF9P41273 254 aa15.91■□□□□ 0.14
NCKIPSD-207ENST00000453349 ALDH7A1P49419 539 aaKnown RBP15.91■□□□□ 0.14
NCKIPSD-207ENST00000453349 AFF1P51825 1210 aaKnown RBP15.91■□□□□ 0.14
NCKIPSD-207ENST00000453349 GRIK3Q13003 919 aa15.91■□□□□ 0.14
NCKIPSD-207ENST00000453349 MORC3Q14149 939 aa15.91■□□□□ 0.14
NCKIPSD-207ENST00000453349 SLC10A6Q3KNW5 377 aa15.91■□□□□ 0.14
NCKIPSD-207ENST00000453349 ALKAL1Q6UXT8 129 aa15.91■□□□□ 0.14
NCKIPSD-207ENST00000453349 CD302Q8IX05 232 aa15.91■□□□□ 0.14
NCKIPSD-207ENST00000453349 SMYD4Q8IYR2 804 aaPredicted RBP15.91■□□□□ 0.14
NCKIPSD-207ENST00000453349 GPD1LQ8N335 351 aa15.91■□□□□ 0.14
NCKIPSD-207ENST00000453349 FAM212AQ96EL1 285 aa15.91■□□□□ 0.14
NCKIPSD-207ENST00000453349 CBWD1Q9BRT8 395 aa15.91■□□□□ 0.14
NCKIPSD-207ENST00000453349 KCTD10Q9H3F6 313 aa15.91■□□□□ 0.14
NCKIPSD-207ENST00000453349 NRDE2Q9H7Z3 1164 aa15.91■□□□□ 0.14
NCKIPSD-207ENST00000453349 COL4A6Q14031 1691 aa15.9■□□□□ 0.14
NCKIPSD-207ENST00000453349 SMIM28A0A1B0GU29 152 aa15.9■□□□□ 0.14
NCKIPSD-207ENST00000453349 FAM189A1O60320 539 aa15.9■□□□□ 0.14
NCKIPSD-207ENST00000453349 ARHGEF15O94989 841 aa15.9■□□□□ 0.14
NCKIPSD-207ENST00000453349 RB1P06400 928 aa15.9■□□□□ 0.14
NCKIPSD-207ENST00000453349 CXCL8P10145 99 aa15.9■□□□□ 0.14
NCKIPSD-207ENST00000453349 CTNNB1P35222 781 aa15.9■□□□□ 0.14
NCKIPSD-207ENST00000453349 FXR1P51114 621 aaKnown RBP eCLIP15.9■□□□□ 0.14
NCKIPSD-207ENST00000453349 PPP2R3AQ06190 1150 aa15.9■□□□□ 0.14
NCKIPSD-207ENST00000453349 EPC2Q52LR7 807 aa15.9■□□□□ 0.14
NCKIPSD-207ENST00000453349 XKR4Q5GH76 650 aa15.9■□□□□ 0.14
NCKIPSD-207ENST00000453349 ZNF280BQ86YH2 543 aa15.9■□□□□ 0.14
NCKIPSD-207ENST00000453349 C12orf56Q8IXR9 622 aa15.9■□□□□ 0.14
NCKIPSD-207ENST00000453349 XXYLT1Q8NBI6 393 aa15.9■□□□□ 0.14
NCKIPSD-207ENST00000453349 GSTCDQ8NEC7 633 aa15.9■□□□□ 0.14
NCKIPSD-207ENST00000453349 ARNTL2Q8WYA1 636 aa15.9■□□□□ 0.14
NCKIPSD-207ENST00000453349 SAAL1Q96ER3 474 aa15.9■□□□□ 0.14
NCKIPSD-207ENST00000453349 SNX27Q96L92 541 aa15.9■□□□□ 0.14
NCKIPSD-207ENST00000453349 ZNF558Q96NG5 402 aa15.9■□□□□ 0.14
NCKIPSD-207ENST00000453349 TSPAN18Q96SJ8 248 aa15.9■□□□□ 0.14
NCKIPSD-207ENST00000453349 C17orf80Q9BSJ5 609 aa15.9■□□□□ 0.14
NCKIPSD-207ENST00000453349 PLVAPQ9BX97 442 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms