RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 AMHP03971 560 aa12.92□□□□□ -0.34
RCL1-208ENST00000448872 CXCL8P10145 99 aa12.92□□□□□ -0.34
RCL1-208ENST00000448872 ITGA4P13612 1032 aa12.92□□□□□ -0.34
RCL1-208ENST00000448872 NR2F2P24468 414 aa12.92□□□□□ -0.34
RCL1-208ENST00000448872 GRM5P41594 1212 aa12.92□□□□□ -0.34
RCL1-208ENST00000448872 KCNJ6P48051 423 aa12.92□□□□□ -0.34
RCL1-208ENST00000448872 RAB27AP51159 221 aa12.92□□□□□ -0.34
RCL1-208ENST00000448872 ENOX2Q16206 610 aaKnown RBP12.92□□□□□ -0.34
RCL1-208ENST00000448872 CLLU1OSQ5K130 101 aa12.92□□□□□ -0.34
RCL1-208ENST00000448872 FAM109BQ6ICB4 259 aaPredicted RBP12.92□□□□□ -0.34
RCL1-208ENST00000448872 CHRDL2Q6WN34 429 aa12.92□□□□□ -0.34
RCL1-208ENST00000448872 LRRC55Q6ZSA7 311 aa12.92□□□□□ -0.34
RCL1-208ENST00000448872 C12orf56Q8IXR9 622 aa12.92□□□□□ -0.34
RCL1-208ENST00000448872 GOLGA5Q8TBA6 731 aa12.92□□□□□ -0.34
RCL1-208ENST00000448872 TOP1MTQ969P6 601 aa12.92□□□□□ -0.34
RCL1-208ENST00000448872 FAM84AQ96KN4 292 aa12.92□□□□□ -0.34
RCL1-208ENST00000448872 RNPC3Q96LT9 517 aaKnown RBP12.92□□□□□ -0.34
RCL1-208ENST00000448872 ZFP42Q96MM3 310 aa12.92□□□□□ -0.34
RCL1-208ENST00000448872 TSG101Q99816 390 aa12.92□□□□□ -0.34
RCL1-208ENST00000448872 TMEM161AQ9NX61 479 aa12.92□□□□□ -0.34
RCL1-208ENST00000448872 RWDD2AQ9UIY3 292 aa12.92□□□□□ -0.34
RCL1-208ENST00000448872 CPSF3Q9UKF6 684 aaKnown RBP12.92□□□□□ -0.34
RCL1-208ENST00000448872 PCDHB7Q9Y5E2 793 aa12.92□□□□□ -0.34
RCL1-208ENST00000448872 SLC4A7Q9Y6M7 1214 aa12.92□□□□□ -0.34
RCL1-208ENST00000448872 EXTL3O43909 919 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 EXOC3O60645 756 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 EFCAB14O75071 495 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 ADRB2P07550 413 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 MLH1P40692 756 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 PPP1R2P41236 205 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 SNRPFP62306 86 aaKnown RBP12.91□□□□□ -0.34
RCL1-208ENST00000448872 LRRC63Q05C16 580 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 SPAG1Q07617 926 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 ADAM9Q13443 819 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 EDRF1Q3B7T1 1238 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 SLC10A6Q3KNW5 377 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 CEP135Q66GS9 1140 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 NPAS4Q8IUM7 802 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 SLC9A9Q8IVB4 645 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 GPD1LQ8N335 351 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 TMEM130Q8N3G9 435 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 XXYLT1Q8NBI6 393 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 HELQQ8TDG4 1101 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 ACAP3Q96P50 834 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 GAD1Q99259 594 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 CGNQ9P2M7 1197 aaKnown RBP12.91□□□□□ -0.34
RCL1-208ENST00000448872 DACH1Q9UI36 760 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 LRFN2Q9ULH4 789 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 SCN5AQ14524 2016 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 KAT6AQ92794 2004 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 BICDL2A1A5D9 508 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 GRXCR1A8MXD5 290 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 OFD1O75665 1012 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 EOMESO95936 686 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 CLTAP09496 248 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 SKIP12755 728 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 ATP2A2P16615 1042 aaKnown RBP12.91□□□□□ -0.34
RCL1-208ENST00000448872 ERCC5P28715 1186 aaPredicted RBP12.91□□□□□ -0.34
RCL1-208ENST00000448872 SNRNP35Q16560 246 aaKnown RBP12.91□□□□□ -0.34
RCL1-208ENST00000448872 NFIL3Q16649 462 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 HSP90AA4PQ58FG1 418 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 GLRA4Q5JXX5 417 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 APBB1IPQ7Z5R6 666 aaPredicted RBP12.91□□□□□ -0.34
RCL1-208ENST00000448872 ZC3H3Q8IXZ2 948 aaKnown RBP12.91□□□□□ -0.34
RCL1-208ENST00000448872 CSGALNACT2Q8N6G5 542 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 GSTCDQ8NEC7 633 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 PGBD4Q96DM1 585 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 FAM212AQ96EL1 285 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 FBXL18Q96ME1 805 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 CCDC94Q9BW85 323 aaPredicted RBP12.91□□□□□ -0.34
RCL1-208ENST00000448872 PRO3102Q9H379 93 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 ELAC1Q9H777 363 aaKnown RBP12.91□□□□□ -0.34
RCL1-208ENST00000448872 RSAD1Q9HA92 442 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 MIOSQ9NXC5 875 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 HCSTQ9UBK5 93 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 PLAGL2Q9UPG8 496 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 INPP5FQ9Y2H2 1132 aa12.91□□□□□ -0.34
RCL1-208ENST00000448872 LAMA3Q16787 3333 aa12.9□□□□□ -0.34
RCL1-208ENST00000448872 ARL5CA6NH57 179 aa12.9□□□□□ -0.34
RCL1-208ENST00000448872 LACTBL1A8MY62 500 aa12.9□□□□□ -0.34
RCL1-208ENST00000448872 DGKIO75912 1065 aa12.9□□□□□ -0.34
RCL1-208ENST00000448872 POMCP01189 267 aa12.9□□□□□ -0.34
RCL1-208ENST00000448872 RABGGTBP53611 331 aa12.9□□□□□ -0.34
RCL1-208ENST00000448872 FKBP3Q00688 224 aaKnown RBP12.9□□□□□ -0.34
RCL1-208ENST00000448872 PAN2Q504Q3 1202 aaKnown RBP12.9□□□□□ -0.34
RCL1-208ENST00000448872 HERC6Q8IVU3 1022 aa12.9□□□□□ -0.34
RCL1-208ENST00000448872 PLEKHO2Q8TD55 490 aa12.9□□□□□ -0.34
RCL1-208ENST00000448872 TMEM174Q8WUU8 243 aa12.9□□□□□ -0.34
RCL1-208ENST00000448872 SNX27Q96L92 541 aa12.9□□□□□ -0.34
RCL1-208ENST00000448872 ZMAT2Q96NC0 199 aaKnown RBP12.9□□□□□ -0.34
RCL1-208ENST00000448872 CASD1Q96PB1 797 aa12.9□□□□□ -0.34
RCL1-208ENST00000448872 SRRTQ9BXP5 876 aaKnown RBP12.9□□□□□ -0.34
RCL1-208ENST00000448872 RPF1Q9H9Y2 349 aaKnown RBP12.9□□□□□ -0.34
RCL1-208ENST00000448872 RBAKQ9NYW8 714 aaPredicted RBP12.9□□□□□ -0.34
RCL1-208ENST00000448872 ZNF233A6NK53 670 aa12.89□□□□□ -0.35
RCL1-208ENST00000448872 TBKBP1A7MCY6 615 aa12.89□□□□□ -0.35
RCL1-208ENST00000448872 PTGESO14684 152 aa12.89□□□□□ -0.35
RCL1-208ENST00000448872 CETN3O15182 167 aa12.89□□□□□ -0.35
RCL1-208ENST00000448872 B4GALT3O60512 393 aa12.89□□□□□ -0.35
RCL1-208ENST00000448872 GJB5O95377 273 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms