RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 ACAP3Q96P50 834 aa15.34■□□□□ 0.05
GTF3C3-206ENST00000448539 TOPORSQ9NS56 1045 aaPredicted RBP15.34■□□□□ 0.05
GTF3C3-206ENST00000448539 EXOC1Q9NV70 894 aa15.34■□□□□ 0.05
GTF3C3-206ENST00000448539 HCSTQ9UBK5 93 aa15.34■□□□□ 0.05
GTF3C3-206ENST00000448539 ZMYM2Q9UBW7 1377 aa15.34■□□□□ 0.05
GTF3C3-206ENST00000448539 LINC00271P0C7V0 271 aa15.33■□□□□ 0.04
GTF3C3-206ENST00000448539 SCNN1GP51170 649 aa15.33■□□□□ 0.04
GTF3C3-206ENST00000448539 FAM160A1Q05DH4 1040 aa15.33■□□□□ 0.04
GTF3C3-206ENST00000448539 MCL1Q07820 350 aa15.33■□□□□ 0.04
GTF3C3-206ENST00000448539 KCNT2Q6UVM3 1135 aa15.33■□□□□ 0.04
GTF3C3-206ENST00000448539 FMR1NBQ8N0W7 255 aaPredicted RBP15.33■□□□□ 0.04
GTF3C3-206ENST00000448539 KLHL23Q8NBE8 558 aa15.33■□□□□ 0.04
GTF3C3-206ENST00000448539 ZFP42Q96MM3 310 aa15.33■□□□□ 0.04
GTF3C3-206ENST00000448539 NRDE2Q9H7Z3 1164 aa15.33■□□□□ 0.04
GTF3C3-206ENST00000448539 TMEM206Q9H813 350 aa15.33■□□□□ 0.04
GTF3C3-206ENST00000448539 HOOK1Q9UJC3 728 aaKnown RBP15.33■□□□□ 0.04
GTF3C3-206ENST00000448539 CHD7Q9P2D1 2997 aa15.32■□□□□ 0.04
GTF3C3-206ENST00000448539 INPPL1O15357 1258 aa15.32■□□□□ 0.04
GTF3C3-206ENST00000448539 NR1I2O75469 434 aa15.32■□□□□ 0.04
GTF3C3-206ENST00000448539 PPP1R37O75864 691 aa15.32■□□□□ 0.04
GTF3C3-206ENST00000448539 CASP5P51878 434 aa15.32■□□□□ 0.04
GTF3C3-206ENST00000448539 BCAR1P56945 870 aa15.32■□□□□ 0.04
GTF3C3-206ENST00000448539 KRT17Q04695 432 aa15.32■□□□□ 0.04
GTF3C3-206ENST00000448539 GRIK3Q13003 919 aa15.32■□□□□ 0.04
GTF3C3-206ENST00000448539 ADGRE1Q14246 886 aa15.32■□□□□ 0.04
GTF3C3-206ENST00000448539 POSTNQ15063 836 aa15.32■□□□□ 0.04
GTF3C3-206ENST00000448539 KYAT1Q16773 422 aa15.32■□□□□ 0.04
GTF3C3-206ENST00000448539 MICALL1Q8N3F8 863 aa15.32■□□□□ 0.04
GTF3C3-206ENST00000448539 TMEM87AQ8NBN3 555 aa15.32■□□□□ 0.04
GTF3C3-206ENST00000448539 HPS3Q969F9 1004 aa15.32■□□□□ 0.04
GTF3C3-206ENST00000448539 MSTO1Q9BUK6 570 aa15.32■□□□□ 0.04
GTF3C3-206ENST00000448539 STRA6Q9BX79 667 aa15.32■□□□□ 0.04
GTF3C3-206ENST00000448539 SPG21Q9NZD8 308 aa15.32■□□□□ 0.04
GTF3C3-206ENST00000448539 PUF60Q9UHX1 559 aaKnown RBP15.32■□□□□ 0.04
GTF3C3-206ENST00000448539 FNDC1Q4ZHG4 1894 aaPredicted RBP15.31■□□□□ 0.04
GTF3C3-206ENST00000448539 ABLIM1O14639 778 aa15.31■□□□□ 0.04
GTF3C3-206ENST00000448539 OGTO15294 1046 aa15.31■□□□□ 0.04
GTF3C3-206ENST00000448539 EIF3DO15371 548 aaKnown RBP eCLIP15.31■□□□□ 0.04
GTF3C3-206ENST00000448539 FGF18O76093 207 aa15.31■□□□□ 0.04
GTF3C3-206ENST00000448539 PRPF6O94906 941 aaKnown RBP15.31■□□□□ 0.04
GTF3C3-206ENST00000448539 ALDH2P05091 517 aa15.31■□□□□ 0.04
GTF3C3-206ENST00000448539 THP07101 528 aa15.31■□□□□ 0.04
GTF3C3-206ENST00000448539 PBX3P40426 434 aa15.31■□□□□ 0.04
GTF3C3-206ENST00000448539 AFF1P51825 1210 aaKnown RBP15.31■□□□□ 0.04
GTF3C3-206ENST00000448539 UBE2HP62256 183 aa15.31■□□□□ 0.04
GTF3C3-206ENST00000448539 PSMD2Q13200 908 aa15.31■□□□□ 0.04
GTF3C3-206ENST00000448539 ZNF280BQ86YH2 543 aa15.31■□□□□ 0.04
GTF3C3-206ENST00000448539 CEP120Q8N960 986 aa15.31■□□□□ 0.04
GTF3C3-206ENST00000448539 POMGNT1Q8WZA1 660 aa15.31■□□□□ 0.04
GTF3C3-206ENST00000448539 TMEM169Q96HH4 297 aa15.31■□□□□ 0.04
GTF3C3-206ENST00000448539 TMEM175Q9BSA9 504 aa15.31■□□□□ 0.04
GTF3C3-206ENST00000448539 FGFBP2Q9BYJ0 223 aa15.31■□□□□ 0.04
GTF3C3-206ENST00000448539 LMAN2LQ9H0V9 348 aa15.31■□□□□ 0.04
GTF3C3-206ENST00000448539 ALG13Q9NP73 1137 aaKnown RBP15.31■□□□□ 0.04
GTF3C3-206ENST00000448539 SLC39A2Q9NP94 309 aa15.31■□□□□ 0.04
GTF3C3-206ENST00000448539 LMCD1Q9NZU5 365 aa15.31■□□□□ 0.04
GTF3C3-206ENST00000448539 PLAGL2Q9UPG8 496 aa15.31■□□□□ 0.04
GTF3C3-206ENST00000448539 A0A0B4J269 797 aa15.3■□□□□ 0.04
GTF3C3-206ENST00000448539 ANKRD63C9JTQ0 380 aa15.3■□□□□ 0.04
GTF3C3-206ENST00000448539 GRM6O15303 877 aa15.3■□□□□ 0.04
GTF3C3-206ENST00000448539 LPXNO60711 386 aa15.3■□□□□ 0.04
GTF3C3-206ENST00000448539 KINO60870 393 aaKnown RBP15.3■□□□□ 0.04
GTF3C3-206ENST00000448539 GADD45BO75293 160 aaPredicted RBP15.3■□□□□ 0.04
GTF3C3-206ENST00000448539 PRPF40AO75400 957 aaKnown RBP15.3■□□□□ 0.04
GTF3C3-206ENST00000448539 DDHD2O94830 711 aa15.3■□□□□ 0.04
GTF3C3-206ENST00000448539 RPN1P04843 607 aaKnown RBP15.3■□□□□ 0.04
GTF3C3-206ENST00000448539 ITGB1P05556 798 aa15.3■□□□□ 0.04
GTF3C3-206ENST00000448539 CLTAP09496 248 aa15.3■□□□□ 0.04
GTF3C3-206ENST00000448539 OR1G1P47890 313 aa15.3■□□□□ 0.04
GTF3C3-206ENST00000448539 KCNA1Q09470 495 aa15.3■□□□□ 0.04
GTF3C3-206ENST00000448539 SNW1Q13573 536 aaKnown RBP15.3■□□□□ 0.04
GTF3C3-206ENST00000448539 KMT5BQ4FZB7 885 aa15.3■□□□□ 0.04
GTF3C3-206ENST00000448539 SEZ6Q53EL9 994 aa15.3■□□□□ 0.04
GTF3C3-206ENST00000448539 ENGASEQ8NFI3 743 aa15.3■□□□□ 0.04
GTF3C3-206ENST00000448539 MRPL38Q96DV4 380 aaKnown RBP15.3■□□□□ 0.04
GTF3C3-206ENST00000448539 TIGD1Q96MW7 591 aa15.3■□□□□ 0.04
GTF3C3-206ENST00000448539 GBP4Q96PP9 640 aa15.3■□□□□ 0.04
GTF3C3-206ENST00000448539 MIOSQ9NXC5 875 aa15.3■□□□□ 0.04
GTF3C3-206ENST00000448539 DNAJB4Q9UDY4 337 aa15.3■□□□□ 0.04
GTF3C3-206ENST00000448539 AGO2Q9UKV8 859 aaKnown RBP15.3■□□□□ 0.04
GTF3C3-206ENST00000448539 FAN1Q9Y2M0 1017 aa15.3■□□□□ 0.04
GTF3C3-206ENST00000448539 MTCH2Q9Y6C9 303 aa15.3■□□□□ 0.04
GTF3C3-206ENST00000448539 RALGAPA2Q2PPJ7 1873 aa15.29■□□□□ 0.04
GTF3C3-206ENST00000448539 UBE4BO95155 1302 aa15.29■□□□□ 0.04
GTF3C3-206ENST00000448539 NT5C1B-RDH14C9J2C7 533 aa15.29■□□□□ 0.04
GTF3C3-206ENST00000448539 KLRC4O43908 158 aa15.29■□□□□ 0.04
GTF3C3-206ENST00000448539 CSPG5O95196 566 aa15.29■□□□□ 0.04
GTF3C3-206ENST00000448539 GALTP07902 379 aa15.29■□□□□ 0.04
GTF3C3-206ENST00000448539 PRR29P0C7W0 189 aa15.29■□□□□ 0.04
GTF3C3-206ENST00000448539 POU3F3P20264 500 aaPredicted RBP15.29■□□□□ 0.04
GTF3C3-206ENST00000448539 SLC11A1P49279 550 aa15.29■□□□□ 0.04
GTF3C3-206ENST00000448539 PLCB3Q01970 1234 aa15.29■□□□□ 0.04
GTF3C3-206ENST00000448539 UBE3AQ05086 875 aa15.29■□□□□ 0.04
GTF3C3-206ENST00000448539 C1QBPQ07021 282 aaKnown RBP15.29■□□□□ 0.04
GTF3C3-206ENST00000448539 EHHADHQ08426 723 aa15.29■□□□□ 0.04
GTF3C3-206ENST00000448539 DPYDQ12882 1025 aa15.29■□□□□ 0.04
GTF3C3-206ENST00000448539 TUSC3Q13454 348 aa15.29■□□□□ 0.04
GTF3C3-206ENST00000448539 BMS1Q14692 1282 aaKnown RBP15.29■□□□□ 0.04
GTF3C3-206ENST00000448539 SLC39A4Q6P5W5 647 aa15.29■□□□□ 0.04
GTF3C3-206ENST00000448539 SLC39A11Q8N1S5 342 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms