RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 NCK2O43639 380 aa27.39■■□□□ 1.98
UFD1-204ENST00000447868 PROZP22891 400 aa27.39■■□□□ 1.98
UFD1-204ENST00000447868 DDX53Q86TM3 631 aaKnown RBP27.39■■□□□ 1.98
UFD1-204ENST00000447868 SFR1Q86XK3 245 aa27.39■■□□□ 1.98
UFD1-204ENST00000447868 VPS52Q8N1B4 723 aa27.39■■□□□ 1.98
UFD1-204ENST00000447868 STAMQ92783 540 aa27.39■■□□□ 1.98
UFD1-204ENST00000447868 NGRNQ9NPE2 291 aaKnown RBP27.39■■□□□ 1.98
UFD1-204ENST00000447868 TBX20Q9UMR3 447 aa27.39■■□□□ 1.98
UFD1-204ENST00000447868 HIDE1A8MVS5 230 aa27.38■■□□□ 1.97
UFD1-204ENST00000447868 ABLIM1O14639 778 aa27.38■■□□□ 1.97
UFD1-204ENST00000447868 PTGESO14684 152 aa27.38■■□□□ 1.97
UFD1-204ENST00000447868 MCF2P10911 925 aa27.38■■□□□ 1.97
UFD1-204ENST00000447868 MATR3P43243 847 aaKnown RBP eCLIP27.38■■□□□ 1.97
UFD1-204ENST00000447868 COL19A1Q14993 1142 aa27.38■■□□□ 1.97
UFD1-204ENST00000447868 DNAJC19Q96DA6 116 aa27.38■■□□□ 1.97
UFD1-204ENST00000447868 FIZ1Q96SL8 496 aa27.38■■□□□ 1.97
UFD1-204ENST00000447868 CCDC94Q9BW85 323 aaPredicted RBP27.38■■□□□ 1.97
UFD1-204ENST00000447868 H3BQ06 376 aaPredicted RBP27.37■■□□□ 1.97
UFD1-204ENST00000447868 NR1I2O75469 434 aa27.37■■□□□ 1.97
UFD1-204ENST00000447868 TOM1L1O75674 476 aa27.37■■□□□ 1.97
UFD1-204ENST00000447868 GRM5P41594 1212 aa27.37■■□□□ 1.97
UFD1-204ENST00000447868 KRT85P78386 507 aa27.37■■□□□ 1.97
UFD1-204ENST00000447868 SMC1AQ14683 1233 aaKnown RBP27.37■■□□□ 1.97
UFD1-204ENST00000447868 E2F4Q16254 413 aa27.37■■□□□ 1.97
UFD1-204ENST00000447868 ZPBP2Q6X784 338 aa27.37■■□□□ 1.97
UFD1-204ENST00000447868 AUTS2Q8WXX7 1259 aa27.37■■□□□ 1.97
UFD1-204ENST00000447868 RABGGTAQ92696 567 aa27.37■■□□□ 1.97
UFD1-204ENST00000447868 SPATA32Q96LK8 384 aa27.37■■□□□ 1.97
UFD1-204ENST00000447868 VN1R3Q9BXE9 311 aa27.37■■□□□ 1.97
UFD1-204ENST00000447868 MARCH5Q9NX47 278 aa27.37■■□□□ 1.97
UFD1-204ENST00000447868 FAM13BQ9NYF5 915 aa27.37■■□□□ 1.97
UFD1-204ENST00000447868 CACNG4Q9UBN1 327 aa27.37■■□□□ 1.97
UFD1-204ENST00000447868 A0A0C4DFX4 3053 aa27.36■■□□□ 1.97
UFD1-204ENST00000447868 F8W810 466 aa27.36■■□□□ 1.97
UFD1-204ENST00000447868 THP07101 528 aa27.36■■□□□ 1.97
UFD1-204ENST00000447868 IDEP14735 1019 aa27.36■■□□□ 1.97
UFD1-204ENST00000447868 LIG4P49917 911 aa27.36■■□□□ 1.97
UFD1-204ENST00000447868 YARSP54577 528 aaKnown RBP27.36■■□□□ 1.97
UFD1-204ENST00000447868 NOLC1Q14978 699 aaKnown RBP eCLIP27.36■■□□□ 1.97
UFD1-204ENST00000447868 CTC1Q2NKJ3 1217 aa27.36■■□□□ 1.97
UFD1-204ENST00000447868 ZC2HC1CQ53FD0 456 aaPredicted RBP27.36■■□□□ 1.97
UFD1-204ENST00000447868 GLRA4Q5JXX5 417 aa27.36■■□□□ 1.97
UFD1-204ENST00000447868 RESP18Q5W5W9 173 aa27.36■■□□□ 1.97
UFD1-204ENST00000447868 IQUBQ8NA54 791 aa27.36■■□□□ 1.97
UFD1-204ENST00000447868 LEO1Q8WVC0 666 aaPredicted RBP27.36■■□□□ 1.97
UFD1-204ENST00000447868 ZBP1Q9H171 429 aa27.36■■□□□ 1.97
UFD1-204ENST00000447868 TBC1D7Q9P0N9 293 aa27.36■■□□□ 1.97
UFD1-204ENST00000447868 ATP6V1DQ9Y5K8 247 aa27.36■■□□□ 1.97
UFD1-204ENST00000447868 TRIP11Q15643 1979 aa27.35■■□□□ 1.97
UFD1-204ENST00000447868 TCF20Q9UGU0 1960 aaKnown RBP27.35■■□□□ 1.97
UFD1-204ENST00000447868 HNRNPDLO14979 420 aaKnown RBP27.35■■□□□ 1.97
UFD1-204ENST00000447868 POLR2DO15514 142 aaKnown RBP27.35■■□□□ 1.97
UFD1-204ENST00000447868 CLDN3O15551 220 aa27.35■■□□□ 1.97
UFD1-204ENST00000447868 CXCL14O95715 111 aa27.35■■□□□ 1.97
UFD1-204ENST00000447868 GAP43P17677 238 aa27.35■■□□□ 1.97
UFD1-204ENST00000447868 SCP2P22307 547 aa27.35■■□□□ 1.97
UFD1-204ENST00000447868 LTBRP36941 435 aa27.35■■□□□ 1.97
UFD1-204ENST00000447868 DLX2Q07687 328 aaPredicted RBP27.35■■□□□ 1.97
UFD1-204ENST00000447868 ADAM15Q13444 863 aa27.35■■□□□ 1.97
UFD1-204ENST00000447868 BMS1Q14692 1282 aaKnown RBP27.35■■□□□ 1.97
UFD1-204ENST00000447868 SEZ6Q53EL9 994 aa27.35■■□□□ 1.97
UFD1-204ENST00000447868 EFHBQ8N7U6 833 aa27.35■■□□□ 1.97
UFD1-204ENST00000447868 KCNN1Q92952 543 aa27.35■■□□□ 1.97
UFD1-204ENST00000447868 COLEC11Q9BWP8 271 aa27.35■■□□□ 1.97
UFD1-204ENST00000447868 CUEDC2Q9H467 287 aa27.35■■□□□ 1.97
UFD1-204ENST00000447868 CASTOR2A6NHX0 329 aa27.34■■□□□ 1.97
UFD1-204ENST00000447868 NDUFV1P49821 464 aa27.34■■□□□ 1.97
UFD1-204ENST00000447868 GTF2BQ00403 316 aa27.34■■□□□ 1.97
UFD1-204ENST00000447868 TUSC3Q13454 348 aa27.34■■□□□ 1.97
UFD1-204ENST00000447868 DUSP6Q16828 381 aa27.34■■□□□ 1.97
UFD1-204ENST00000447868 LEXMQ3ZCV2 418 aa27.34■■□□□ 1.97
UFD1-204ENST00000447868 MRPL43Q8N983 215 aaKnown RBP27.34■■□□□ 1.97
UFD1-204ENST00000447868 ACAP3Q96P50 834 aa27.34■■□□□ 1.97
UFD1-204ENST00000447868 PAAF1Q9BRP4 392 aa27.34■■□□□ 1.97
UFD1-204ENST00000447868 COL25A1Q9BXS0 654 aaPredicted RBP27.34■■□□□ 1.97
UFD1-204ENST00000447868 HAPLN2Q9GZV7 340 aa27.34■■□□□ 1.97
UFD1-204ENST00000447868 TNMDQ9H2S6 317 aa27.34■■□□□ 1.97
UFD1-204ENST00000447868 MRPL44Q9H9J2 332 aaKnown RBP27.34■■□□□ 1.97
UFD1-204ENST00000447868 PANK4Q9NVE7 773 aa27.34■■□□□ 1.97
UFD1-204ENST00000447868 TCHHQ07283 1943 aa27.33■■□□□ 1.97
UFD1-204ENST00000447868 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.33■■□□□ 1.97
UFD1-204ENST00000447868 C2orf71A6NGG8 1288 aa27.33■■□□□ 1.97
UFD1-204ENST00000447868 TBX10O75333 385 aa27.33■■□□□ 1.97
UFD1-204ENST00000447868 CTSAP10619 480 aa27.33■■□□□ 1.97
UFD1-204ENST00000447868 BMP1P13497 986 aa27.33■■□□□ 1.97
UFD1-204ENST00000447868 RBM10P98175 930 aaKnown RBP27.33■■□□□ 1.97
UFD1-204ENST00000447868 MCL1Q07820 350 aa27.33■■□□□ 1.97
UFD1-204ENST00000447868 CLUL1Q15846 466 aa27.33■■□□□ 1.97
UFD1-204ENST00000447868 HERC4Q5GLZ8 1057 aaPredicted RBP27.33■■□□□ 1.97
UFD1-204ENST00000447868 ZNF720Q7Z2F6 126 aa27.33■■□□□ 1.97
UFD1-204ENST00000447868 TOPORSQ9NS56 1045 aaPredicted RBP27.33■■□□□ 1.97
UFD1-204ENST00000447868 SEL1LQ9UBV2 794 aa27.33■■□□□ 1.97
UFD1-204ENST00000447868 DLL1O00548 723 aa27.32■■□□□ 1.96
UFD1-204ENST00000447868 ABCD1P33897 745 aa27.32■■□□□ 1.96
UFD1-204ENST00000447868 NAB2Q15742 525 aa27.32■■□□□ 1.96
UFD1-204ENST00000447868 MAP4K3Q8IVH8 894 aa27.32■■□□□ 1.96
UFD1-204ENST00000447868 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.32■■□□□ 1.96
UFD1-204ENST00000447868 CDCA3Q99618 268 aaPredicted RBP27.32■■□□□ 1.96
UFD1-204ENST00000447868 LRRC27Q9C0I9 530 aa27.32■■□□□ 1.96
UFD1-204ENST00000447868 ST6GALNAC4Q9H4F1 302 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms