RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 TMEM175Q9BSA9 504 aa16.26■□□□□ 0.19
HDAC4-204ENST00000446876 HAPLN2Q9GZV7 340 aa16.26■□□□□ 0.19
HDAC4-204ENST00000446876 UBE2ZQ9H832 354 aaPredicted RBP16.26■□□□□ 0.19
HDAC4-204ENST00000446876 GDPD2Q9HCC8 539 aa16.26■□□□□ 0.19
HDAC4-204ENST00000446876 MARCH5Q9NX47 278 aa16.26■□□□□ 0.19
HDAC4-204ENST00000446876 PUF60Q9UHX1 559 aaKnown RBP16.26■□□□□ 0.19
HDAC4-204ENST00000446876 KCNG1Q9UIX4 513 aa16.26■□□□□ 0.19
HDAC4-204ENST00000446876 TBX20Q9UMR3 447 aa16.26■□□□□ 0.19
HDAC4-204ENST00000446876 LZTS1Q9Y250 596 aa16.26■□□□□ 0.19
HDAC4-204ENST00000446876 FAN1Q9Y2M0 1017 aa16.26■□□□□ 0.19
HDAC4-204ENST00000446876 ZMYM2Q9UBW7 1377 aa16.26■□□□□ 0.19
HDAC4-204ENST00000446876 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.25■□□□□ 0.19
HDAC4-204ENST00000446876 HIDE1A8MVS5 230 aa16.25■□□□□ 0.19
HDAC4-204ENST00000446876 H0YCG3 227 aa16.25■□□□□ 0.19
HDAC4-204ENST00000446876 PER2O15055 1255 aa16.25■□□□□ 0.19
HDAC4-204ENST00000446876 TOM1L1O75674 476 aa16.25■□□□□ 0.19
HDAC4-204ENST00000446876 MCF2P10911 925 aa16.25■□□□□ 0.19
HDAC4-204ENST00000446876 KCNA5P22460 613 aa16.25■□□□□ 0.19
HDAC4-204ENST00000446876 CA8P35219 290 aa16.25■□□□□ 0.19
HDAC4-204ENST00000446876 GRM5P41594 1212 aa16.25■□□□□ 0.19
HDAC4-204ENST00000446876 KCNQ1P51787 676 aa16.25■□□□□ 0.19
HDAC4-204ENST00000446876 NOLC1Q14978 699 aaKnown RBP eCLIP16.25■□□□□ 0.19
HDAC4-204ENST00000446876 TMC7Q7Z402 723 aa16.25■□□□□ 0.19
HDAC4-204ENST00000446876 PAAF1Q9BRP4 392 aa16.25■□□□□ 0.19
HDAC4-204ENST00000446876 FGFBP2Q9BYJ0 223 aa16.25■□□□□ 0.19
HDAC4-204ENST00000446876 IKZF4Q9H2S9 585 aa16.25■□□□□ 0.19
HDAC4-204ENST00000446876 CLDND1Q9NY35 253 aa16.25■□□□□ 0.19
HDAC4-204ENST00000446876 FAM13BQ9NYF5 915 aa16.25■□□□□ 0.19
HDAC4-204ENST00000446876 COG5Q9UP83 839 aa16.25■□□□□ 0.19
HDAC4-204ENST00000446876 CASTOR2A6NHX0 329 aa16.24■□□□□ 0.19
HDAC4-204ENST00000446876 TISP43B9A030 160 aa16.24■□□□□ 0.19
HDAC4-204ENST00000446876 H3BQ06 376 aaPredicted RBP16.24■□□□□ 0.19
HDAC4-204ENST00000446876 HNRNPDLO14979 420 aaKnown RBP16.24■□□□□ 0.19
HDAC4-204ENST00000446876 MEFVO15553 781 aaPredicted RBP16.24■□□□□ 0.19
HDAC4-204ENST00000446876 ALDH2P05091 517 aa16.24■□□□□ 0.19
HDAC4-204ENST00000446876 CASP1P29466 404 aa16.24■□□□□ 0.19
HDAC4-204ENST00000446876 MATR3P43243 847 aaKnown RBP eCLIP16.24■□□□□ 0.192e-6■■■■□ 21
HDAC4-204ENST00000446876 LIG4P49917 911 aa16.24■□□□□ 0.19
HDAC4-204ENST00000446876 MRPS5P82675 430 aaKnown RBP16.24■□□□□ 0.19
HDAC4-204ENST00000446876 RBM10P98175 930 aaKnown RBP16.24■□□□□ 0.19
HDAC4-204ENST00000446876 DLX2Q07687 328 aaPredicted RBP16.24■□□□□ 0.19
HDAC4-204ENST00000446876 SLC39A4Q6P5W5 647 aa16.24■□□□□ 0.19
HDAC4-204ENST00000446876 ZPBP2Q6X784 338 aa16.24■□□□□ 0.19
HDAC4-204ENST00000446876 APBB1IPQ7Z5R6 666 aaPredicted RBP16.24■□□□□ 0.19
HDAC4-204ENST00000446876 VPS52Q8N1B4 723 aa16.24■□□□□ 0.19
HDAC4-204ENST00000446876 IQUBQ8NA54 791 aa16.24■□□□□ 0.19
HDAC4-204ENST00000446876 ATXN2LQ8WWM7 1075 aaKnown RBP16.24■□□□□ 0.19
HDAC4-204ENST00000446876 PABPC5Q96DU9 382 aaKnown RBP16.24■□□□□ 0.19
HDAC4-204ENST00000446876 ASB2Q96Q27 587 aa16.24■□□□□ 0.19
HDAC4-204ENST00000446876 CCDC94Q9BW85 323 aaPredicted RBP16.24■□□□□ 0.19
HDAC4-204ENST00000446876 ZBP1Q9H171 429 aa16.24■□□□□ 0.19
HDAC4-204ENST00000446876 TNMDQ9H2S6 317 aa16.24■□□□□ 0.19
HDAC4-204ENST00000446876 TLE6Q9H808 572 aa16.24■□□□□ 0.19
HDAC4-204ENST00000446876 PANK4Q9NVE7 773 aa16.24■□□□□ 0.19
HDAC4-204ENST00000446876 KBTBD4Q9NVX7 518 aa16.24■□□□□ 0.19
HDAC4-204ENST00000446876 ATP6V1DQ9Y5K8 247 aa16.24■□□□□ 0.19
HDAC4-204ENST00000446876 XIRP2A4UGR9 3374 aa16.23■□□□□ 0.19
HDAC4-204ENST00000446876 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.23■□□□□ 0.19
HDAC4-204ENST00000446876 A0A1B0GVL5 298 aa16.23■□□□□ 0.19
HDAC4-204ENST00000446876 FRMD3A2A2Y4 597 aa16.23■□□□□ 0.19
HDAC4-204ENST00000446876 TBX10O75333 385 aa16.23■□□□□ 0.19
HDAC4-204ENST00000446876 MYBP10242 640 aa16.23■□□□□ 0.19
HDAC4-204ENST00000446876 GAP43P17677 238 aa16.23■□□□□ 0.19
HDAC4-204ENST00000446876 CASP5P51878 434 aa16.23■□□□□ 0.19
HDAC4-204ENST00000446876 GTF2BQ00403 316 aa16.23■□□□□ 0.19
HDAC4-204ENST00000446876 MCL1Q07820 350 aa16.23■□□□□ 0.19
HDAC4-204ENST00000446876 COL19A1Q14993 1142 aa16.23■□□□□ 0.19
HDAC4-204ENST00000446876 NAB2Q15742 525 aa16.23■□□□□ 0.19
HDAC4-204ENST00000446876 HERC4Q5GLZ8 1057 aaPredicted RBP16.23■□□□□ 0.19
HDAC4-204ENST00000446876 ZBTB41Q5SVQ8 909 aa16.23■□□□□ 0.19
HDAC4-204ENST00000446876 ZNF720Q7Z2F6 126 aa16.23■□□□□ 0.19
HDAC4-204ENST00000446876 DDX53Q86TM3 631 aaKnown RBP16.23■□□□□ 0.19
HDAC4-204ENST00000446876 MAP4K3Q8IVH8 894 aa16.23■□□□□ 0.19
HDAC4-204ENST00000446876 GRAMD1CQ8IYS0 662 aa16.23■□□□□ 0.19
HDAC4-204ENST00000446876 KCNN1Q92952 543 aa16.23■□□□□ 0.19
HDAC4-204ENST00000446876 HPS3Q969F9 1004 aa16.23■□□□□ 0.19
HDAC4-204ENST00000446876 TRIM9Q9C026 710 aa16.23■□□□□ 0.19
HDAC4-204ENST00000446876 CUEDC2Q9H467 287 aa16.23■□□□□ 0.19
HDAC4-204ENST00000446876 MRPL44Q9H9J2 332 aaKnown RBP16.23■□□□□ 0.19
HDAC4-204ENST00000446876 KCNH3Q9ULD8 1083 aa16.23■□□□□ 0.19
HDAC4-204ENST00000446876 C2orf71A6NGG8 1288 aa16.22■□□□□ 0.19
HDAC4-204ENST00000446876 ANKRD63C9JTQ0 380 aa16.22■□□□□ 0.19
HDAC4-204ENST00000446876 CLDN3O15551 220 aa16.22■□□□□ 0.19
HDAC4-204ENST00000446876 PPP1R37O75864 691 aa16.22■□□□□ 0.19
HDAC4-204ENST00000446876 GLP2RO95838 553 aa16.22■□□□□ 0.19
HDAC4-204ENST00000446876 PIGRP01833 764 aa16.22■□□□□ 0.19
HDAC4-204ENST00000446876 THP07101 528 aa16.22■□□□□ 0.19
HDAC4-204ENST00000446876 PFKFB1P16118 471 aa16.22■□□□□ 0.19
HDAC4-204ENST00000446876 LTBRP36941 435 aa16.22■□□□□ 0.19
HDAC4-204ENST00000446876 TNFSF9P41273 254 aa16.22■□□□□ 0.19
HDAC4-204ENST00000446876 YARSP54577 528 aaKnown RBP16.22■□□□□ 0.19
HDAC4-204ENST00000446876 ASIC1P78348 528 aa16.22■□□□□ 0.19
HDAC4-204ENST00000446876 KCNA1Q09470 495 aa16.22■□□□□ 0.19
HDAC4-204ENST00000446876 COASYQ13057 564 aa16.22■□□□□ 0.19
HDAC4-204ENST00000446876 TUSC3Q13454 348 aa16.22■□□□□ 0.19
HDAC4-204ENST00000446876 SMC1AQ14683 1233 aaKnown RBP16.22■□□□□ 0.19
HDAC4-204ENST00000446876 CLUL1Q15846 466 aa16.22■□□□□ 0.19
HDAC4-204ENST00000446876 DUSP6Q16828 381 aa16.22■□□□□ 0.19
HDAC4-204ENST00000446876 TAS1R1Q7RTX1 841 aa16.22■□□□□ 0.19
HDAC4-204ENST00000446876 GLIS3Q8NEA6 775 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms