RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	DYNLT1	P63172	113 aa		13.41	□□□□□ -0.26
DDR1-238	ENST00000446312	PLCB3	Q01970	1234 aa		13.41	□□□□□ -0.26
DDR1-238	ENST00000446312	AGBL2	Q5U5Z8	902 aa		13.41	□□□□□ -0.26
DDR1-238	ENST00000446312	SIAH1	Q8IUQ4	282 aa		13.41	□□□□□ -0.26
DDR1-238	ENST00000446312	SLF2	Q8IX21	1173 aa		13.41	□□□□□ -0.26
DDR1-238	ENST00000446312	ARL10	Q8N8L6	244 aa		13.41	□□□□□ -0.26
DDR1-238	ENST00000446312	B4GALNT2	Q8NHY0	566 aa		13.41	□□□□□ -0.26
DDR1-238	ENST00000446312	PLEKHO2	Q8TD55	490 aa		13.41	□□□□□ -0.26
DDR1-238	ENST00000446312	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.41	□□□□□ -0.26
DDR1-238	ENST00000446312	RBM17	Q96I25	401 aa	Known RBP	13.41	□□□□□ -0.26
DDR1-238	ENST00000446312	TCEAL9	Q9UHQ7	104 aa		13.41	□□□□□ -0.26
DDR1-238	ENST00000446312	ZNF232	Q9UNY5	417 aa		13.41	□□□□□ -0.26
DDR1-238	ENST00000446312	IRS2	Q9Y4H2	1338 aa		13.41	□□□□□ -0.26
DDR1-238	ENST00000446312	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.41	□□□□□ -0.26
DDR1-238	ENST00000446312	CEP350	Q5VT06	3117 aa		13.41	□□□□□ -0.26
DDR1-238	ENST00000446312	ATF7	P17544	494 aa	Predicted RBP	13.41	□□□□□ -0.26
DDR1-238	ENST00000446312	VCAM1	P19320	739 aa		13.41	□□□□□ -0.26
DDR1-238	ENST00000446312	ITGA8	P53708	1063 aa		13.41	□□□□□ -0.26
DDR1-238	ENST00000446312	POU5F1	Q01860	360 aa	Known RBP	13.41	□□□□□ -0.26
DDR1-238	ENST00000446312	OVGP1	Q12889	678 aa		13.41	□□□□□ -0.26
DDR1-238	ENST00000446312	SH3BP5L	Q7L8J4	393 aa		13.41	□□□□□ -0.26
DDR1-238	ENST00000446312	POMGNT1	Q8WZA1	660 aa		13.41	□□□□□ -0.26
DDR1-238	ENST00000446312	SEMA4D	Q92854	862 aa		13.41	□□□□□ -0.26
DDR1-238	ENST00000446312	ZNF317	Q96PQ6	595 aa	Predicted RBP	13.41	□□□□□ -0.26
DDR1-238	ENST00000446312	UNC45A	Q9H3U1	944 aa		13.41	□□□□□ -0.26
DDR1-238	ENST00000446312	DCTN4	Q9UJW0	460 aa		13.41	□□□□□ -0.26
DDR1-238	ENST00000446312	ZMYM2	Q9UBW7	1377 aa		13.4	□□□□□ -0.26
DDR1-238	ENST00000446312	SPATA31A5	Q5VU36	1347 aa		13.4	□□□□□ -0.26
DDR1-238	ENST00000446312	SPATA31A7	Q8IWB4	1347 aa		13.4	□□□□□ -0.26
DDR1-238	ENST00000446312	CFH	P08603	1231 aa		13.4	□□□□□ -0.26
DDR1-238	ENST00000446312	TMEM253	P0C7T8	217 aa		13.4	□□□□□ -0.26
DDR1-238	ENST00000446312	RAB27A	P51159	221 aa		13.4	□□□□□ -0.26
DDR1-238	ENST00000446312	BFSP1	Q12934	665 aa		13.4	□□□□□ -0.26
DDR1-238	ENST00000446312	COBLL1	Q53SF7	1204 aa		13.4	□□□□□ -0.26
DDR1-238	ENST00000446312	C10orf76	Q5T2E6	689 aa		13.4	□□□□□ -0.26
DDR1-238	ENST00000446312	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	13.4	□□□□□ -0.26
DDR1-238	ENST00000446312	LRRN4	Q8WUT4	740 aa		13.4	□□□□□ -0.26
DDR1-238	ENST00000446312	TGS1	Q96RS0	853 aa	Known RBP	13.4	□□□□□ -0.26
DDR1-238	ENST00000446312	ETNK1	Q9HBU6	452 aa		13.4	□□□□□ -0.26
DDR1-238	ENST00000446312	PRR12	Q9ULL5	1215 aa		13.4	□□□□□ -0.26
DDR1-238	ENST00000446312	NRAP	Q86VF7	1730 aa		13.4	□□□□□ -0.26
DDR1-238	ENST00000446312	RREB1	Q92766	1687 aa		13.4	□□□□□ -0.26
DDR1-238	ENST00000446312	PPEF1	O14829	653 aa	Predicted RBP	13.4	□□□□□ -0.26
DDR1-238	ENST00000446312	EYA4	O95677	639 aa		13.4	□□□□□ -0.26
DDR1-238	ENST00000446312	ZBTB48	P10074	688 aa	Predicted RBP	13.4	□□□□□ -0.26
DDR1-238	ENST00000446312	COIL	P38432	576 aa	Predicted RBP	13.4	□□□□□ -0.26
DDR1-238	ENST00000446312	CNGA2	Q16280	664 aa		13.4	□□□□□ -0.26
DDR1-238	ENST00000446312	PADI6	Q6TGC4	694 aa		13.4	□□□□□ -0.26
DDR1-238	ENST00000446312	ZNF720	Q7Z2F6	126 aa		13.4	□□□□□ -0.26
DDR1-238	ENST00000446312	VSIG1	Q86XK7	387 aa		13.4	□□□□□ -0.26
DDR1-238	ENST00000446312	CSRNP1	Q96S65	589 aa		13.4	□□□□□ -0.26
DDR1-238	ENST00000446312	WDR11	Q9BZH6	1224 aa		13.4	□□□□□ -0.26
DDR1-238	ENST00000446312	TMEM117	Q9H0C3	514 aa		13.4	□□□□□ -0.26
DDR1-238	ENST00000446312	ACTR5	Q9H9F9	607 aa	Predicted RBP	13.4	□□□□□ -0.26
DDR1-238	ENST00000446312	SAE1	Q9UBE0	346 aa	Predicted RBP	13.4	□□□□□ -0.26
DDR1-238	ENST00000446312	SWAP70	Q9UH65	585 aa		13.4	□□□□□ -0.26
DDR1-238	ENST00000446312	ANKRD62	A6NC57	917 aa		13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	PHF2	O75151	1096 aa		13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	SNHG28	P0DPA3	235 aa		13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	EIF2AK2	P19525	551 aa	Known RBP	13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	GPC5	P78333	572 aa		13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	ANKRD23	Q86SG2	305 aa		13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	SPATS2	Q86XZ4	545 aa	Known RBP	13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	ANKMY2	Q8IV38	441 aa		13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	DRAXIN	Q8NBI3	349 aa	Predicted RBP	13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	IL31RA	Q8NI17	732 aa		13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	AGBL1	Q96MI9	1066 aa		13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	ZSWIM1	Q9BR11	485 aa		13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	VAV3	Q9UKW4	847 aa		13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	ROBO3	Q96MS0	1386 aa		13.39	□□□□□ -0.27
DDR1-238	ENST00000446312		A6NNZ2	444 aa		13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	TPP2	P29144	1249 aa	Predicted RBP	13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	PTGIR	P43119	386 aa		13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	VAMP7	P51809	220 aa		13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	DBN1	Q16643	649 aa		13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	TUBB8	Q3ZCM7	444 aa		13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	SCARA3	Q6AZY7	606 aa		13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	SLC30A9	Q6PML9	568 aa		13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	FITM2	Q8N6M3	262 aa		13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	GLIS1	Q8NBF1	620 aa		13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	TLCD1	Q96CP7	247 aa		13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	HAO1	Q9UJM8	370 aa		13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	TELO2	Q9Y4R8	837 aa		13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	PPIP5K2	O43314	1243 aa		13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	PRKCI	P41743	596 aa		13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	MXI1	P50539	228 aa		13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	PPP4R3CP	Q6ZMV5	832 aa		13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	EPM2AIP1	Q7L775	607 aa	Predicted RBP	13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	SLFN11	Q7Z7L1	901 aa		13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	RASGEF1C	Q8N431	466 aa		13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	EZH1	Q92800	747 aa	Predicted RBP	13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	C11orf70	Q9BRQ4	267 aa		13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	METTL5	Q9NRN9	209 aa	Known RBP	13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	LMCD1	Q9NZU5	365 aa		13.39	□□□□□ -0.27
DDR1-238	ENST00000446312	CBX6	O95503	412 aa		13.38	□□□□□ -0.27
DDR1-238	ENST00000446312	NEFH	P12036	1026 aa		13.38	□□□□□ -0.27
DDR1-238	ENST00000446312	KRT15	P19012	456 aa		13.38	□□□□□ -0.27
DDR1-238	ENST00000446312	NRL	P54845	237 aa		13.38	□□□□□ -0.27
DDR1-238	ENST00000446312	FASTKD3	Q14CZ7	662 aa	Known RBP	13.38	□□□□□ -0.27
DDR1-238	ENST00000446312	TMEM132A	Q24JP5	1023 aa		13.38	□□□□□ -0.27

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