RNA–Protein interactions for RNA: ENST00000445561.5

TRO-215, Transcript of trophinin, human

TSL 1 (best)

Gene TRO, Length 2,597 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRO-215	ENST00000445561	MAPK13	O15264	365 aa		13.52	□□□□□ -0.24
TRO-215	ENST00000445561	CLDN3	O15551	220 aa		13.52	□□□□□ -0.24
TRO-215	ENST00000445561	MTA2	O94776	668 aa		13.52	□□□□□ -0.24
TRO-215	ENST00000445561	KRT5	P13647	590 aa		13.52	□□□□□ -0.24
TRO-215	ENST00000445561	COIL	P38432	576 aa	Predicted RBP	13.52	□□□□□ -0.24
TRO-215	ENST00000445561	FNTA	P49354	379 aa		13.52	□□□□□ -0.24
TRO-215	ENST00000445561	SMTN	P53814	917 aa		13.52	□□□□□ -0.24
TRO-215	ENST00000445561	DRG2	P55039	364 aa	Known RBP	13.52	□□□□□ -0.24
TRO-215	ENST00000445561	IFI35	P80217	286 aa	Predicted RBP	13.52	□□□□□ -0.24
TRO-215	ENST00000445561	CDR2	Q01850	454 aa		13.52	□□□□□ -0.24
TRO-215	ENST00000445561	SIX1	Q15475	284 aa	Predicted RBP	13.52	□□□□□ -0.24
TRO-215	ENST00000445561	ARHGEF16	Q5VV41	709 aa		13.52	□□□□□ -0.24
TRO-215	ENST00000445561	HOOK3	Q86VS8	718 aa		13.52	□□□□□ -0.24
TRO-215	ENST00000445561	CCDC25	Q86WR0	208 aa		13.52	□□□□□ -0.24
TRO-215	ENST00000445561	TTLL6	Q8N841	843 aa		13.52	□□□□□ -0.24
TRO-215	ENST00000445561	FBXL13	Q8NEE6	735 aa		13.52	□□□□□ -0.24
TRO-215	ENST00000445561	EPS8L3	Q8TE67	593 aa	Known RBP	13.52	□□□□□ -0.24
TRO-215	ENST00000445561	DDX1	Q92499	740 aa	Known RBP	13.52	□□□□□ -0.24
TRO-215	ENST00000445561	IWS1	Q96ST2	819 aa		13.52	□□□□□ -0.24
TRO-215	ENST00000445561	SELENOS	Q9BQE4	189 aa		13.52	□□□□□ -0.24
TRO-215	ENST00000445561	TMEM8A	Q9HCN3	771 aa		13.52	□□□□□ -0.24
TRO-215	ENST00000445561	KMT5A	Q9NQR1	393 aa		13.52	□□□□□ -0.24
TRO-215	ENST00000445561	PXMP2	Q9NR77	195 aa		13.52	□□□□□ -0.24
TRO-215	ENST00000445561	ADGRA3	Q8IWK6	1321 aa		13.52	□□□□□ -0.24
TRO-215	ENST00000445561	EGFR	P00533	1210 aa		13.52	□□□□□ -0.25
TRO-215	ENST00000445561	HSPA6	P17066	643 aa		13.52	□□□□□ -0.25
TRO-215	ENST00000445561	MTMR2	Q13614	643 aa		13.52	□□□□□ -0.25
TRO-215	ENST00000445561	SPRED3	Q2MJR0	410 aa		13.52	□□□□□ -0.25
TRO-215	ENST00000445561	FKBP1C	Q5VVH2	108 aa		13.52	□□□□□ -0.25
TRO-215	ENST00000445561	LMBRD2	Q68DH5	695 aa	Predicted RBP	13.52	□□□□□ -0.25
TRO-215	ENST00000445561	LLGL2	Q6P1M3	1020 aa		13.52	□□□□□ -0.25
TRO-215	ENST00000445561	C6orf89	Q6UWU4	347 aa		13.52	□□□□□ -0.25
TRO-215	ENST00000445561	RNF207	Q6ZRF8	634 aa		13.52	□□□□□ -0.25
TRO-215	ENST00000445561	SV2A	Q7L0J3	742 aa		13.52	□□□□□ -0.25
TRO-215	ENST00000445561	YTHDF3	Q7Z739	585 aa	Known RBP	13.52	□□□□□ -0.25
TRO-215	ENST00000445561	C1orf54	Q8WWF1	131 aa		13.52	□□□□□ -0.25
TRO-215	ENST00000445561	NT5C1B	Q96P26	610 aa		13.52	□□□□□ -0.25
TRO-215	ENST00000445561	EFCC1	Q9HA90	598 aa		13.52	□□□□□ -0.25
TRO-215	ENST00000445561	GTF3C4	Q9UKN8	822 aa		13.52	□□□□□ -0.25
TRO-215	ENST00000445561	EXOC7	Q9UPT5	735 aa		13.52	□□□□□ -0.25
TRO-215	ENST00000445561	RIPK3	Q9Y572	518 aa		13.52	□□□□□ -0.25
TRO-215	ENST00000445561	SRRM3	A6NNA2	597 aa	Predicted RBP	13.51	□□□□□ -0.25
TRO-215	ENST00000445561	PODXL	O00592	558 aa		13.51	□□□□□ -0.25
TRO-215	ENST00000445561	PMM2	O15305	246 aa		13.51	□□□□□ -0.25
TRO-215	ENST00000445561	GRIN3B	O60391	1043 aa		13.51	□□□□□ -0.25
TRO-215	ENST00000445561	PAEP	P09466	180 aa		13.51	□□□□□ -0.25
TRO-215	ENST00000445561	GPC3	P51654	580 aa		13.51	□□□□□ -0.25
TRO-215	ENST00000445561	RWDD2B	P57060	319 aa		13.51	□□□□□ -0.25
TRO-215	ENST00000445561	SNX1	Q13596	522 aa		13.51	□□□□□ -0.25
TRO-215	ENST00000445561	SPDYC	Q5MJ68	293 aa		13.51	□□□□□ -0.25
TRO-215	ENST00000445561	DAB2IP	Q5VWQ8	1189 aa		13.51	□□□□□ -0.25
TRO-215	ENST00000445561	KCNV1	Q6PIU1	500 aa		13.51	□□□□□ -0.25
TRO-215	ENST00000445561	SEC16B	Q96JE7	1060 aa		13.51	□□□□□ -0.25
TRO-215	ENST00000445561	CEP170P1	Q96L14	293 aa		13.51	□□□□□ -0.25
TRO-215	ENST00000445561	MTUS1	Q9ULD2	1270 aa		13.51	□□□□□ -0.25
TRO-215	ENST00000445561	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.51	□□□□□ -0.25
TRO-215	ENST00000445561	ZNF862	O60290	1169 aa		13.51	□□□□□ -0.25
TRO-215	ENST00000445561	CTNND1	O60716	968 aa	Known RBP	13.51	□□□□□ -0.25
TRO-215	ENST00000445561	FSBP	O95073	299 aa		13.51	□□□□□ -0.25
TRO-215	ENST00000445561	CHN1	P15882	459 aa		13.51	□□□□□ -0.25
TRO-215	ENST00000445561	JAK3	P52333	1124 aa		13.51	□□□□□ -0.25
TRO-215	ENST00000445561	BYSL	Q13895	437 aa	Known RBP	13.51	□□□□□ -0.25
TRO-215	ENST00000445561	RTKN2	Q8IZC4	609 aa		13.51	□□□□□ -0.25
TRO-215	ENST00000445561	FAM213A	Q9BRX8	229 aa		13.51	□□□□□ -0.25
TRO-215	ENST00000445561	GABBR1	Q9UBS5	961 aa		13.51	□□□□□ -0.25
TRO-215	ENST00000445561	MTRF1L	Q9UGC7	380 aa	Known RBP	13.51	□□□□□ -0.25
TRO-215	ENST00000445561	ANAPC7	Q9UJX3	599 aa		13.51	□□□□□ -0.25
TRO-215	ENST00000445561	HNRNPDL	O14979	420 aa	Known RBP	13.5	□□□□□ -0.25
TRO-215	ENST00000445561	RGS16	O15492	202 aa	Predicted RBP	13.5	□□□□□ -0.25
TRO-215	ENST00000445561	HNRNPH1	P31943	449 aa	Known RBP	13.5	□□□□□ -0.25
TRO-215	ENST00000445561	SNRPF	P62306	86 aa	Known RBP	13.5	□□□□□ -0.25
TRO-215	ENST00000445561	GHRHR	Q02643	423 aa		13.5	□□□□□ -0.25
TRO-215	ENST00000445561	CYP24A1	Q07973	514 aa		13.5	□□□□□ -0.25
TRO-215	ENST00000445561	ACAD10	Q6JQN1	1059 aa		13.5	□□□□□ -0.25
TRO-215	ENST00000445561	CPLX4	Q7Z7G2	160 aa		13.5	□□□□□ -0.25
TRO-215	ENST00000445561	ATG4A	Q8WYN0	398 aa		13.5	□□□□□ -0.25
TRO-215	ENST00000445561	LPAR1	Q92633	364 aa		13.5	□□□□□ -0.25
TRO-215	ENST00000445561	CABS1	Q96KC9	395 aa		13.5	□□□□□ -0.25
TRO-215	ENST00000445561	TIPIN	Q9BVW5	301 aa		13.5	□□□□□ -0.25
TRO-215	ENST00000445561	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.5	□□□□□ -0.25
TRO-215	ENST00000445561	COQ4	Q9Y3A0	265 aa		13.5	□□□□□ -0.25
TRO-215	ENST00000445561	RIPK2	O43353	540 aa		13.5	□□□□□ -0.25
TRO-215	ENST00000445561	GGPS1	O95749	300 aa		13.5	□□□□□ -0.25
TRO-215	ENST00000445561	KRT76	Q01546	638 aa		13.5	□□□□□ -0.25
TRO-215	ENST00000445561	MAP3K10	Q02779	954 aa		13.5	□□□□□ -0.25
TRO-215	ENST00000445561	CXCL9	Q07325	125 aa		13.5	□□□□□ -0.25
TRO-215	ENST00000445561	BAAT	Q14032	418 aa	Predicted RBP	13.5	□□□□□ -0.25
TRO-215	ENST00000445561	PPP1R7	Q15435	360 aa		13.5	□□□□□ -0.25
TRO-215	ENST00000445561	CYP1B1	Q16678	543 aa		13.5	□□□□□ -0.25
TRO-215	ENST00000445561	CCDC38	Q502W7	563 aa		13.5	□□□□□ -0.25
TRO-215	ENST00000445561	ERMARD	Q5T6L9	678 aa		13.5	□□□□□ -0.25
TRO-215	ENST00000445561	MMS22L	Q6ZRQ5	1243 aa		13.5	□□□□□ -0.25
TRO-215	ENST00000445561	PSPC1	Q8WXF1	523 aa	Known RBP	13.5	□□□□□ -0.25
TRO-215	ENST00000445561	CPA5	Q8WXQ8	436 aa		13.5	□□□□□ -0.25
TRO-215	ENST00000445561	XPO6	Q96QU8	1125 aa	Known RBP	13.5	□□□□□ -0.25
TRO-215	ENST00000445561	OSBPL7	Q9BZF2	842 aa		13.5	□□□□□ -0.25
TRO-215	ENST00000445561	KIAA1683	Q9H0B3	1180 aa		13.5	□□□□□ -0.25
TRO-215	ENST00000445561	ADAM7	Q9H2U9	754 aa		13.5	□□□□□ -0.25
TRO-215	ENST00000445561	MYOZ2	Q9NPC6	264 aa		13.5	□□□□□ -0.25
TRO-215	ENST00000445561	ANKEF1	Q9NU02	776 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms