RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 NLRP11P59045 1033 aaKnown RBP16.91■□□□□ 0.3
SNX13-204ENST00000444712 MKRN3Q13064 507 aaKnown RBP16.91■□□□□ 0.3
SNX13-204ENST00000444712 ZACNQ401N2 412 aa16.91■□□□□ 0.3
SNX13-204ENST00000444712 CFAP221Q4G0U5 840 aa16.91■□□□□ 0.3
SNX13-204ENST00000444712 PLEKHH3Q7Z736 793 aa16.91■□□□□ 0.3
SNX13-204ENST00000444712 CREG2Q8IUH2 290 aa16.91■□□□□ 0.3
SNX13-204ENST00000444712 HELQQ8TDG4 1101 aa16.91■□□□□ 0.3
SNX13-204ENST00000444712 RUBCNQ92622 972 aa16.91■□□□□ 0.3
SNX13-204ENST00000444712 POP1Q99575 1024 aaKnown RBP16.91■□□□□ 0.3
SNX13-204ENST00000444712 CGRRF1Q99675 332 aa16.91■□□□□ 0.3
SNX13-204ENST00000444712 ANKZF1Q9H8Y5 726 aa16.91■□□□□ 0.3
SNX13-204ENST00000444712 RRAGCQ9HB90 399 aa16.91■□□□□ 0.3
SNX13-204ENST00000444712 SEPT11Q9NVA2 429 aaKnown RBP16.91■□□□□ 0.3
SNX13-204ENST00000444712 SUCLA2Q9P2R7 463 aaPredicted RBP16.91■□□□□ 0.3
SNX13-204ENST00000444712 MSCO60682 206 aa16.91■□□□□ 0.3
SNX13-204ENST00000444712 PRKCBP05771 671 aa16.91■□□□□ 0.3
SNX13-204ENST00000444712 GZMAP12544 262 aa16.91■□□□□ 0.3
SNX13-204ENST00000444712 USP8P40818 1118 aa16.91■□□□□ 0.3
SNX13-204ENST00000444712 SMYD5Q6GMV2 418 aa16.91■□□□□ 0.3
SNX13-204ENST00000444712 NFRKBQ6P4R8 1299 aa16.91■□□□□ 0.3
SNX13-204ENST00000444712 RHOT2Q8IXI1 618 aa16.91■□□□□ 0.3
SNX13-204ENST00000444712 RNF149Q8NC42 400 aa16.91■□□□□ 0.3
SNX13-204ENST00000444712 TPCN2Q8NHX9 752 aa16.91■□□□□ 0.3
SNX13-204ENST00000444712 OLIG1Q8TAK6 271 aa16.91■□□□□ 0.3
SNX13-204ENST00000444712 HNRNPLLQ8WVV9 542 aaKnown RBP16.91■□□□□ 0.3
SNX13-204ENST00000444712 DHX38Q92620 1227 aaKnown RBP16.91■□□□□ 0.3
SNX13-204ENST00000444712 KREMEN1Q96MU8 473 aa16.91■□□□□ 0.3
SNX13-204ENST00000444712 ZCCHC17Q9NP64 241 aaKnown RBP16.91■□□□□ 0.3
SNX13-204ENST00000444712 TOPORSQ9NS56 1045 aaPredicted RBP16.91■□□□□ 0.3
SNX13-204ENST00000444712 SLC15A5A6NIM6 579 aa16.9■□□□□ 0.3
SNX13-204ENST00000444712 TULP1O00294 542 aaPredicted RBP16.9■□□□□ 0.3
SNX13-204ENST00000444712 ZNF185O15231 689 aa16.9■□□□□ 0.3
SNX13-204ENST00000444712 LGALS2P05162 132 aa16.9■□□□□ 0.3
SNX13-204ENST00000444712 PIK3CAP42336 1068 aa16.9■□□□□ 0.3
SNX13-204ENST00000444712 PDE6CP51160 858 aa16.9■□□□□ 0.3
SNX13-204ENST00000444712 POU5F1BQ06416 359 aa16.9■□□□□ 0.3
SNX13-204ENST00000444712 PRPF4BQ13523 1007 aaKnown RBP16.9■□□□□ 0.3
SNX13-204ENST00000444712 IRF5Q13568 498 aa16.9■□□□□ 0.3
SNX13-204ENST00000444712 CRELD2Q6UXH1 353 aaPredicted RBP16.9■□□□□ 0.3
SNX13-204ENST00000444712 NFKBIZQ9BYH8 718 aa16.9■□□□□ 0.3
SNX13-204ENST00000444712 OGFRQ9NZT2 677 aa16.9■□□□□ 0.3
SNX13-204ENST00000444712 EVPLQ92817 2033 aa16.9■□□□□ 0.3
SNX13-204ENST00000444712 RTN2O75298 545 aa16.89■□□□□ 0.29
SNX13-204ENST00000444712 TFRCP02786 760 aaKnown RBP16.89■□□□□ 0.29
SNX13-204ENST00000444712 C4BPAP04003 597 aaKnown RBP16.89■□□□□ 0.29
SNX13-204ENST00000444712 ACOT2P49753 483 aa16.89■□□□□ 0.29
SNX13-204ENST00000444712 DRP2Q13474 957 aa16.89■□□□□ 0.29
SNX13-204ENST00000444712 RPS6KA1Q15418 735 aa16.89■□□□□ 0.29
SNX13-204ENST00000444712 WDR93Q6P2C0 686 aa16.89■□□□□ 0.29
SNX13-204ENST00000444712 RHPN2Q8IUC4 686 aa16.89■□□□□ 0.29
SNX13-204ENST00000444712 BRSK2Q8IWQ3 736 aa16.89■□□□□ 0.29
SNX13-204ENST00000444712 MMGT1Q8N4V1 131 aa16.89■□□□□ 0.29
SNX13-204ENST00000444712 NOA1Q8NC60 698 aaKnown RBP16.89■□□□□ 0.29
SNX13-204ENST00000444712 EPS8L1Q8TE68 723 aa16.89■□□□□ 0.29
SNX13-204ENST00000444712 ACO2Q99798 780 aaKnown RBP16.89■□□□□ 0.29
SNX13-204ENST00000444712 ABHD16BQ9H3Z7 469 aa16.89■□□□□ 0.29
SNX13-204ENST00000444712 OGTO15294 1046 aa16.89■□□□□ 0.29
SNX13-204ENST00000444712 PPFIA4O75335 1185 aa16.89■□□□□ 0.29
SNX13-204ENST00000444712 FTCDO95954 541 aa16.89■□□□□ 0.29
SNX13-204ENST00000444712 RHOXF2BP0C7M4 288 aa16.89■□□□□ 0.29
SNX13-204ENST00000444712 SRGAP2CP0DJJ0 459 aa16.89■□□□□ 0.29
SNX13-204ENST00000444712 BPIFB4P59827 614 aa16.89■□□□□ 0.29
SNX13-204ENST00000444712 MKRN4PQ13434 485 aaPredicted RBP16.89■□□□□ 0.29
SNX13-204ENST00000444712 BIRC3Q13489 604 aa16.89■□□□□ 0.29
SNX13-204ENST00000444712 TCEAL1Q15170 157 aa16.89■□□□□ 0.29
SNX13-204ENST00000444712 EFCAB12Q6NXP0 572 aa16.89■□□□□ 0.29
SNX13-204ENST00000444712 CC2D1AQ6P1N0 951 aaPredicted RBP16.89■□□□□ 0.29
SNX13-204ENST00000444712 SLFN11Q7Z7L1 901 aa16.89■□□□□ 0.29
SNX13-204ENST00000444712 RPUSD2Q8IZ73 545 aaKnown RBP16.89■□□□□ 0.29
SNX13-204ENST00000444712 LRRC71Q8N4P6 559 aa16.89■□□□□ 0.29
SNX13-204ENST00000444712 LRRC57Q8N9N7 239 aa16.89■□□□□ 0.29
SNX13-204ENST00000444712 MAML3Q96JK9 1138 aa16.89■□□□□ 0.29
SNX13-204ENST00000444712 ZBTB45Q96K62 511 aaPredicted RBP16.89■□□□□ 0.29
SNX13-204ENST00000444712 PBKQ96KB5 322 aa16.89■□□□□ 0.29
SNX13-204ENST00000444712 RHOXF2Q9BQY4 288 aa16.89■□□□□ 0.29
SNX13-204ENST00000444712 TCHPQ9BT92 498 aa16.89■□□□□ 0.29
SNX13-204ENST00000444712 HAPLN2Q9GZV7 340 aa16.89■□□□□ 0.29
SNX13-204ENST00000444712 KATNBL1Q9H079 304 aa16.89■□□□□ 0.29
SNX13-204ENST00000444712 ISCUQ9H1K1 167 aa16.89■□□□□ 0.29
SNX13-204ENST00000444712 NCK2O43639 380 aa16.88■□□□□ 0.29
SNX13-204ENST00000444712 HLA-DRAP01903 254 aa16.88■□□□□ 0.29
SNX13-204ENST00000444712 HADHBP55084 474 aaKnown RBP16.88■□□□□ 0.29
SNX13-204ENST00000444712 MCL1Q07820 350 aa16.88■□□□□ 0.29
SNX13-204ENST00000444712 ZNF677Q86XU0 584 aa16.88■□□□□ 0.29
SNX13-204ENST00000444712 COG1Q8WTW3 980 aa16.88■□□□□ 0.29
SNX13-204ENST00000444712 ZNF516Q92618 1163 aa16.88■□□□□ 0.29
SNX13-204ENST00000444712 SELENOOQ9BVL4 669 aa16.88■□□□□ 0.29
SNX13-204ENST00000444712 EPC1Q9H2F5 836 aa16.88■□□□□ 0.29
SNX13-204ENST00000444712 PDE11AQ9HCR9 933 aa16.88■□□□□ 0.29
SNX13-204ENST00000444712 NOCTQ9UK39 431 aaKnown RBP16.88■□□□□ 0.29
SNX13-204ENST00000444712 ACKR2O00590 384 aa16.87■□□□□ 0.29
SNX13-204ENST00000444712 ZRANB2O95218 330 aaKnown RBP eCLIP16.87■□□□□ 0.29
SNX13-204ENST00000444712 KIF4AO95239 1232 aa16.87■□□□□ 0.29
SNX13-204ENST00000444712 C22orf31O95567 290 aa16.87■□□□□ 0.29
SNX13-204ENST00000444712 TBXAS1P24557 533 aaPredicted RBP16.87■□□□□ 0.29
SNX13-204ENST00000444712 TMOD1P28289 359 aa16.87■□□□□ 0.29
SNX13-204ENST00000444712 PHKA2P46019 1235 aa16.87■□□□□ 0.29
SNX13-204ENST00000444712 DUSP28Q4G0W2 176 aa16.87■□□□□ 0.29
SNX13-204ENST00000444712 IQSEC1Q6DN90 963 aa16.87■□□□□ 0.29
SNX13-204ENST00000444712 TSHZ1Q6ZSZ6 1077 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms