RNA–Protein interactions for RNA: ENST00000444621.1

HLA-F-221, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-221ENST00000444621 VPS52Q8N1B4 723 aa12.18□□□□□ -0.46
HLA-F-221ENST00000444621 BSNDQ8WZ55 320 aa12.18□□□□□ -0.46
HLA-F-221ENST00000444621 IGSF21Q96ID5 467 aa12.18□□□□□ -0.46
HLA-F-221ENST00000444621 RIPOR3Q96MK2 946 aa12.18□□□□□ -0.46
HLA-F-221ENST00000444621 PNMA5Q96PV4 448 aa12.18□□□□□ -0.46
HLA-F-221ENST00000444621 GAD1Q99259 594 aa12.18□□□□□ -0.46
HLA-F-221ENST00000444621 CCSER1Q9C0I3 900 aa12.18□□□□□ -0.46
HLA-F-221ENST00000444621 POLD4Q9HCU8 107 aa12.18□□□□□ -0.46
HLA-F-221ENST00000444621 HCSTQ9UBK5 93 aa12.18□□□□□ -0.46
HLA-F-221ENST00000444621 ODF2LQ9ULJ1 636 aa12.18□□□□□ -0.46
HLA-F-221ENST00000444621 MTMR6Q9Y217 621 aa12.18□□□□□ -0.46
HLA-F-221ENST00000444621 PCDHGC5Q9Y5F6 944 aa12.18□□□□□ -0.46
HLA-F-221ENST00000444621 SRPRBQ9Y5M8 271 aaKnown RBP12.18□□□□□ -0.46
HLA-F-221ENST00000444621 MYO10Q9HD67 2058 aa12.17□□□□□ -0.46
HLA-F-221ENST00000444621 MEIS3P2A8K0S8 358 aa12.17□□□□□ -0.46
HLA-F-221ENST00000444621 SFI1A8K8P3 1242 aa12.17□□□□□ -0.46
HLA-F-221ENST00000444621 TBCAO75347 108 aaKnown RBP12.17□□□□□ -0.46
HLA-F-221ENST00000444621 AKAP5P24588 427 aa12.17□□□□□ -0.46
HLA-F-221ENST00000444621 DDIT3P35638 169 aa12.17□□□□□ -0.46
HLA-F-221ENST00000444621 PBX3P40426 434 aa12.17□□□□□ -0.46
HLA-F-221ENST00000444621 MLH1P40692 756 aa12.17□□□□□ -0.46
HLA-F-221ENST00000444621 NBL1P41271 181 aa12.17□□□□□ -0.46
HLA-F-221ENST00000444621 ID4P47928 161 aa12.17□□□□□ -0.46
HLA-F-221ENST00000444621 ERVFC1P60507 584 aa12.17□□□□□ -0.46
HLA-F-221ENST00000444621 RBM10P98175 930 aaKnown RBP12.17□□□□□ -0.46
HLA-F-221ENST00000444621 GRIK3Q13003 919 aa12.17□□□□□ -0.46
HLA-F-221ENST00000444621 SLC39A14Q15043 492 aa12.17□□□□□ -0.46
HLA-F-221ENST00000444621 TMEM119Q4V9L6 283 aa12.17□□□□□ -0.46
HLA-F-221ENST00000444621 KIAA1841Q6NSI8 718 aa12.17□□□□□ -0.46
HLA-F-221ENST00000444621 ELMSAN1Q6PJG2 1045 aa12.17□□□□□ -0.46
HLA-F-221ENST00000444621 ZBTB33Q86T24 672 aa12.17□□□□□ -0.46
HLA-F-221ENST00000444621 GPBP1Q86WP2 473 aa12.17□□□□□ -0.46
HLA-F-221ENST00000444621 CDR2LQ86X02 465 aaPredicted RBP12.17□□□□□ -0.46
HLA-F-221ENST00000444621 MYCT1Q8N699 235 aa12.17□□□□□ -0.46
HLA-F-221ENST00000444621 KRI1Q8N9T8 703 aaKnown RBP12.17□□□□□ -0.46
HLA-F-221ENST00000444621 SPIRE2Q8WWL2 714 aa12.17□□□□□ -0.46
HLA-F-221ENST00000444621 SUSD6Q92537 303 aa12.17□□□□□ -0.46
HLA-F-221ENST00000444621 LARP4BQ92615 738 aaKnown RBP12.17□□□□□ -0.46
HLA-F-221ENST00000444621 BICD1Q96G01 975 aa12.17□□□□□ -0.46
HLA-F-221ENST00000444621 NTPCRQ9BSD7 190 aaKnown RBP12.17□□□□□ -0.46
HLA-F-221ENST00000444621 RUSC1Q9BVN2 902 aa12.17□□□□□ -0.46
HLA-F-221ENST00000444621 CCDC94Q9BW85 323 aaPredicted RBP12.17□□□□□ -0.46
HLA-F-221ENST00000444621 EMILIN2Q9BXX0 1053 aa12.17□□□□□ -0.46
HLA-F-221ENST00000444621 CCDC113Q9H0I3 377 aa12.17□□□□□ -0.46
HLA-F-221ENST00000444621 RNF39Q9H2S5 420 aa12.17□□□□□ -0.46
HLA-F-221ENST00000444621 NXF3Q9H4D5 531 aaKnown RBP12.17□□□□□ -0.46
HLA-F-221ENST00000444621 ZHX3Q9H4I2 956 aa12.17□□□□□ -0.46
HLA-F-221ENST00000444621 PDZD7Q9H5P4 517 aa12.17□□□□□ -0.46
HLA-F-221ENST00000444621 TOPORSQ9NS56 1045 aaPredicted RBP12.17□□□□□ -0.46
HLA-F-221ENST00000444621 HES2Q9Y543 173 aa12.17□□□□□ -0.46
HLA-F-221ENST00000444621 MYH11P35749 1972 aa12.17□□□□□ -0.46
HLA-F-221ENST00000444621 TDRD15B5MCY1 1934 aaKnown RBP12.17□□□□□ -0.46
HLA-F-221ENST00000444621 FAM186AA6NE01 2351 aa12.16□□□□□ -0.46
HLA-F-221ENST00000444621 SPDYE4A6NLX3 237 aa12.16□□□□□ -0.46
HLA-F-221ENST00000444621 NRP1O14786 923 aa12.16□□□□□ -0.46
HLA-F-221ENST00000444621 FSCN2O14926 492 aa12.16□□□□□ -0.46
HLA-F-221ENST00000444621 PER2O15055 1255 aa12.16□□□□□ -0.46
HLA-F-221ENST00000444621 SLC16A4O15374 487 aa12.16□□□□□ -0.46
HLA-F-221ENST00000444621 TADA2AO75478 443 aa12.16□□□□□ -0.46
HLA-F-221ENST00000444621 THP07101 528 aa12.16□□□□□ -0.46
HLA-F-221ENST00000444621 PLCG1P19174 1290 aa12.16□□□□□ -0.46
HLA-F-221ENST00000444621 SLC11A1P49279 550 aa12.16□□□□□ -0.46
HLA-F-221ENST00000444621 SCNN1GP51170 649 aa12.16□□□□□ -0.46
HLA-F-221ENST00000444621 SLC12A3P55017 1021 aa12.16□□□□□ -0.46
HLA-F-221ENST00000444621 BECN1Q14457 450 aa12.16□□□□□ -0.46
HLA-F-221ENST00000444621 KARSQ15046 597 aaKnown RBP12.16□□□□□ -0.46
HLA-F-221ENST00000444621 DUSP6Q16828 381 aa12.16□□□□□ -0.46
HLA-F-221ENST00000444621 ATL3Q6DD88 541 aa12.16□□□□□ -0.46
HLA-F-221ENST00000444621 CCDC73Q6ZRK6 1079 aa12.16□□□□□ -0.46
HLA-F-221ENST00000444621 SV2BQ7L1I2 683 aa12.16□□□□□ -0.46
HLA-F-221ENST00000444621 KCNK18Q7Z418 384 aa12.16□□□□□ -0.46
HLA-F-221ENST00000444621 PPFIBP1Q86W92 1011 aa12.16□□□□□ -0.46
HLA-F-221ENST00000444621 ZNF280BQ86YH2 543 aa12.16□□□□□ -0.46
HLA-F-221ENST00000444621 MRPL43Q8N983 215 aaKnown RBP12.16□□□□□ -0.46
HLA-F-221ENST00000444621 RAD54LQ92698 747 aa12.16□□□□□ -0.46
HLA-F-221ENST00000444621 CASP10Q92851 521 aa12.16□□□□□ -0.46
HLA-F-221ENST00000444621 KIFC3Q9BVG8 833 aa12.16□□□□□ -0.46
HLA-F-221ENST00000444621 LRRC27Q9C0I9 530 aa12.16□□□□□ -0.46
HLA-F-221ENST00000444621 MRPL17Q9NRX2 175 aaKnown RBP12.16□□□□□ -0.46
HLA-F-221ENST00000444621 SNTG2Q9NY99 539 aa12.16□□□□□ -0.46
HLA-F-221ENST00000444621 KLK14Q9P0G3 267 aa12.16□□□□□ -0.46
HLA-F-221ENST00000444621 DNAJB4Q9UDY4 337 aa12.16□□□□□ -0.46
HLA-F-221ENST00000444621 STK17AQ9UEE5 414 aa12.16□□□□□ -0.46
HLA-F-221ENST00000444621 DPP7Q9UHL4 492 aa12.16□□□□□ -0.46
HLA-F-221ENST00000444621 CFAP45Q9UL16 551 aa12.16□□□□□ -0.46
HLA-F-221ENST00000444621 TNFSF13BQ9Y275 285 aa12.16□□□□□ -0.46
HLA-F-221ENST00000444621 RIF1Q5UIP0 2472 aaKnown RBP12.15□□□□□ -0.46
HLA-F-221ENST00000444621 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.15□□□□□ -0.46
HLA-F-221ENST00000444621 INPPL1O15357 1258 aa12.15□□□□□ -0.46
HLA-F-221ENST00000444621 DDHD2O94830 711 aa12.15□□□□□ -0.46
HLA-F-221ENST00000444621 URODP06132 367 aa12.15□□□□□ -0.46
HLA-F-221ENST00000444621 ZSCAN22P10073 491 aaPredicted RBP12.15□□□□□ -0.46
HLA-F-221ENST00000444621 CTSAP10619 480 aa12.15□□□□□ -0.46
HLA-F-221ENST00000444621 MCM6Q14566 821 aa12.15□□□□□ -0.46
HLA-F-221ENST00000444621 PTPAQ15257 358 aa12.15□□□□□ -0.46
HLA-F-221ENST00000444621 ZNF568Q3ZCX4 644 aa12.15□□□□□ -0.46
HLA-F-221ENST00000444621 TPRNQ4KMQ1 711 aa12.15□□□□□ -0.46
HLA-F-221ENST00000444621 FRMD5Q7Z6J6 570 aa12.15□□□□□ -0.46
HLA-F-221ENST00000444621 COLGALT2Q8IYK4 626 aa12.15□□□□□ -0.46
HLA-F-221ENST00000444621 TMEM105Q8N8V8 129 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms