RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 CLVS1Q8IUQ0 354 aaPredicted RBP10.9□□□□□ -0.66
LIN54-202ENST00000442461 TPH2Q8IWU9 490 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 MB21D2Q8IYB1 491 aaPredicted RBP10.9□□□□□ -0.66
LIN54-202ENST00000442461 ACTRT1Q8TDG2 376 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 CNKSR1Q969H4 720 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 ADAM33Q9BZ11 813 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 MYLK2Q9H1R3 596 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 RAD21L1Q9H4I0 556 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 PRDM11Q9NQV5 511 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 CNOT8Q9UFF9 292 aaKnown RBP10.9□□□□□ -0.66
LIN54-202ENST00000442461 DENND2AQ9ULE3 1009 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 FIS1Q9Y3D6 152 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 ERVK-7P63135 1459 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 ITSN2Q9NZM3 1697 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 KLRF2D3W0D1 207 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 CFAP99D6REC4 459 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 PDE2AO00408 941 aaPredicted RBP10.9□□□□□ -0.66
LIN54-202ENST00000442461 NFIBO00712 420 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 CASP2P42575 452 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 ERVK-9P63128 1117 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 PARP6Q2NL67 630 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 STOX1Q6ZVD7 989 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 PASD1Q8IV76 773 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 ARID3BQ8IVW6 561 aaPredicted RBP10.9□□□□□ -0.66
LIN54-202ENST00000442461 ZCCHC7Q8N3Z6 543 aaKnown RBP10.9□□□□□ -0.66
LIN54-202ENST00000442461 CAPSLQ8WWF8 208 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 TUBGCP3Q96CW5 907 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 DDX25Q9UHL0 483 aaKnown RBP10.9□□□□□ -0.66
LIN54-202ENST00000442461 PLXNC1O60486 1568 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 FTLP02792 175 aaPredicted RBP10.9□□□□□ -0.66
LIN54-202ENST00000442461 PLEKP08567 350 aaPredicted RBP10.9□□□□□ -0.66
LIN54-202ENST00000442461 ALOX15P16050 662 aaPredicted RBP10.9□□□□□ -0.66
LIN54-202ENST00000442461 CHN2P52757 468 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 GALCP54803 685 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 PRPSAP1Q14558 356 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 FIGNQ5HY92 759 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 CDKAL1Q5VV42 579 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 LRRC8EQ6NSJ5 796 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 DARS2Q6PI48 645 aaKnown RBP10.9□□□□□ -0.66
LIN54-202ENST00000442461 ZNF354CQ86Y25 554 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 CYGBQ8WWM9 190 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 PAGR1Q9BTK6 254 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 NOL6Q9H6R4 1146 aaKnown RBP10.9□□□□□ -0.66
LIN54-202ENST00000442461 AURKCQ9UQB9 309 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 AK5Q9Y6K8 562 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 TRIM43BA6NCK2 446 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 GSTA4O15217 222 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 A1BGP04217 495 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 KPNA2P52292 529 aaKnown RBP10.89□□□□□ -0.67
LIN54-202ENST00000442461 ATP2C1P98194 919 aaPredicted RBP10.89□□□□□ -0.67
LIN54-202ENST00000442461 CACNB1Q02641 598 aaPredicted RBP10.89□□□□□ -0.67
LIN54-202ENST00000442461 MYBPC2Q14324 1141 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 ZNF564Q8TBZ8 553 aaPredicted RBP10.89□□□□□ -0.67
LIN54-202ENST00000442461 NMRK1Q9NWW6 199 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 SELENONQ9NZV5 590 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 WDR35Q9P2L0 1181 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 MROH7Q68CQ1 1323 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 RFX7Q2KHR2 1363 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 FAM196BA6NMK8 535 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 AIM2O14862 343 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 FDPSP14324 419 aaKnown RBP10.89□□□□□ -0.67
LIN54-202ENST00000442461 CDC27P30260 824 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 MAGEA4P43358 317 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 IFI35P80217 286 aaPredicted RBP10.89□□□□□ -0.67
LIN54-202ENST00000442461 PABPC4Q13310 644 aaKnown RBP eCLIP10.89□□□□□ -0.67
LIN54-202ENST00000442461 INPP5AQ14642 412 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 TMEM110Q86TL2 294 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 SLFN12Q8IYM2 578 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 DCLK2Q8N568 766 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 GDPD5Q8WTR4 605 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 PUS7LQ9H0K6 701 aaKnown RBP10.89□□□□□ -0.67
LIN54-202ENST00000442461 PREBQ9HCU5 417 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 PCDHGC5Q9Y5F6 944 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 KDM5BQ9UGL1 1544 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 RBM47A0AV96 593 aaKnown RBP10.89□□□□□ -0.67
LIN54-202ENST00000442461 UPP2O95045 317 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 CTDNEP1O95476 244 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 GAP43P17677 238 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 RASA2Q15283 850 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 MAPRE2Q15555 327 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 HIF1AQ16665 826 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 QPCTQ16769 361 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 RBM44Q6ZP01 1051 aaKnown RBP10.89□□□□□ -0.67
LIN54-202ENST00000442461 NLRP3Q96P20 1036 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 APOL6Q9BWW8 343 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 BRIP1Q9BX63 1249 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 RPAP3Q9H6T3 665 aaPredicted RBP10.89□□□□□ -0.67
LIN54-202ENST00000442461 CD209Q9NNX6 404 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 IRF6O14896 467 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 GYS1P13807 737 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 NR1H2P55055 460 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 SCYL2Q6P3W7 929 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 TAS2R42Q7RTR8 314 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 TTC13Q8NBP0 860 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 SEMA4AQ9H3S1 761 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 GOLPH3Q9H4A6 298 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 EBF2Q9HAK2 575 aa10.89□□□□□ -0.67
LIN54-202ENST00000442461 POTEB3A0JP26 581 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 SH3BP5O60239 455 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 RHOBTB3O94955 611 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms