RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 FBXO16Q8IX29 292 aaPredicted RBP15.24■□□□□ 0.03
LIMD1-202ENST00000440097 NRBP2Q9NSY0 501 aa15.24■□□□□ 0.03
LIMD1-202ENST00000440097 GSTTP1A0A1W2PQM5 241 aa15.24■□□□□ 0.03
LIMD1-202ENST00000440097 K7ERI5 159 aa15.24■□□□□ 0.03
LIMD1-202ENST00000440097 DDX3XO00571 662 aaKnown RBP eCLIP15.24■□□□□ 0.036e-7■■■□□ 18.1
LIMD1-202ENST00000440097 H2AFZP0C0S5 128 aa15.24■□□□□ 0.03
LIMD1-202ENST00000440097 BRDTQ58F21 947 aaPredicted RBP15.24■□□□□ 0.03
LIMD1-202ENST00000440097 H2AFVQ71UI9 128 aa15.24■□□□□ 0.03
LIMD1-202ENST00000440097 TRIM50Q86XT4 487 aa15.24■□□□□ 0.03
LIMD1-202ENST00000440097 SPATS2Q86XZ4 545 aaKnown RBP15.24■□□□□ 0.03
LIMD1-202ENST00000440097 ARHGEF19Q8IW93 802 aa15.24■□□□□ 0.03
LIMD1-202ENST00000440097 SEPT1Q8WYJ6 367 aa15.24■□□□□ 0.03
LIMD1-202ENST00000440097 PDLIM7Q9NR12 457 aa15.24■□□□□ 0.03
LIMD1-202ENST00000440097 TOPORSQ9NS56 1045 aaPredicted RBP15.24■□□□□ 0.03
LIMD1-202ENST00000440097 ANKFY1Q9P2R3 1169 aa15.24■□□□□ 0.03
LIMD1-202ENST00000440097 CEP83Q9Y592 693 aa15.24■□□□□ 0.03
LIMD1-202ENST00000440097 WDR81Q562E7 1941 aa15.24■□□□□ 0.03
LIMD1-202ENST00000440097 H0YCG3 227 aa15.24■□□□□ 0.03
LIMD1-202ENST00000440097 TGFB3P10600 412 aa15.24■□□□□ 0.03
LIMD1-202ENST00000440097 HARSP12081 509 aaKnown RBP15.24■□□□□ 0.03
LIMD1-202ENST00000440097 TNFAIP3P21580 790 aa15.24■□□□□ 0.03
LIMD1-202ENST00000440097 EDNRBP24530 442 aa15.24■□□□□ 0.03
LIMD1-202ENST00000440097 PAFAH1B1P43034 410 aa15.24■□□□□ 0.03
LIMD1-202ENST00000440097 RNF187Q5TA31 235 aaPredicted RBP15.24■□□□□ 0.03
LIMD1-202ENST00000440097 C8orf74Q6P047 294 aa15.24■□□□□ 0.03
LIMD1-202ENST00000440097 SLC39A4Q6P5W5 647 aa15.24■□□□□ 0.03
LIMD1-202ENST00000440097 METTL7BQ6UX53 244 aa15.24■□□□□ 0.03
LIMD1-202ENST00000440097 FMNL3Q8IVF7 1028 aa15.24■□□□□ 0.03
LIMD1-202ENST00000440097 EPN3Q9H201 632 aa15.24■□□□□ 0.03
LIMD1-202ENST00000440097 GOLPH3Q9H4A6 298 aa15.24■□□□□ 0.03
LIMD1-202ENST00000440097 DONSONQ9NYP3 566 aa15.24■□□□□ 0.03
LIMD1-202ENST00000440097 LCTP09848 1927 aa15.23■□□□□ 0.03
LIMD1-202ENST00000440097 ATG7O95352 703 aa15.23■□□□□ 0.03
LIMD1-202ENST00000440097 HSDL1Q3SXM5 330 aa15.23■□□□□ 0.03
LIMD1-202ENST00000440097 C1orf220Q5T0J3 134 aa15.23■□□□□ 0.03
LIMD1-202ENST00000440097 KRT39Q6A163 491 aa15.23■□□□□ 0.03
LIMD1-202ENST00000440097 KDM7AQ6ZMT4 941 aa15.23■□□□□ 0.03
LIMD1-202ENST00000440097 GPD1LQ8N335 351 aa15.23■□□□□ 0.03
LIMD1-202ENST00000440097 PARD3BQ8TEW8 1205 aa15.23■□□□□ 0.03
LIMD1-202ENST00000440097 ZNF473Q8WTR7 871 aaKnown RBP15.23■□□□□ 0.03
LIMD1-202ENST00000440097 ELMO3Q96BJ8 720 aa15.23■□□□□ 0.03
LIMD1-202ENST00000440097 TLR10Q9BXR5 811 aa15.23■□□□□ 0.03
LIMD1-202ENST00000440097 P4HA2O15460 535 aa15.23■□□□□ 0.03
LIMD1-202ENST00000440097 ARIH2O95376 493 aa15.23■□□□□ 0.03
LIMD1-202ENST00000440097 PRLRP16471 622 aa15.23■□□□□ 0.03
LIMD1-202ENST00000440097 RFX1P22670 979 aa15.23■□□□□ 0.03
LIMD1-202ENST00000440097 RTP1P59025 263 aa15.23■□□□□ 0.03
LIMD1-202ENST00000440097 ERVK-9P63128 1117 aa15.23■□□□□ 0.03
LIMD1-202ENST00000440097 IFI16Q16666 785 aaKnown RBP15.23■□□□□ 0.03
LIMD1-202ENST00000440097 MICALCLQ6ZW33 695 aa15.23■□□□□ 0.03
LIMD1-202ENST00000440097 LMO3Q8TAP4 145 aa15.23■□□□□ 0.03
LIMD1-202ENST00000440097 ASAP3Q8TDY4 903 aa15.23■□□□□ 0.03
LIMD1-202ENST00000440097 PORCNQ9H237 461 aa15.23■□□□□ 0.03
LIMD1-202ENST00000440097 RBM12Q9NTZ6 932 aaKnown RBP15.23■□□□□ 0.03
LIMD1-202ENST00000440097 ARHGAP28Q9P2N2 729 aa15.23■□□□□ 0.03
LIMD1-202ENST00000440097 SUFUQ9UMX1 484 aa15.23■□□□□ 0.03
LIMD1-202ENST00000440097 ZNF233A6NK53 670 aa15.22■□□□□ 0.03
LIMD1-202ENST00000440097 FAM153BP0C7A2 387 aa15.22■□□□□ 0.03
LIMD1-202ENST00000440097 FAM153CQ494X1 144 aa15.22■□□□□ 0.03
LIMD1-202ENST00000440097 CFAP58Q5T655 872 aa15.22■□□□□ 0.03
LIMD1-202ENST00000440097 LMBRD2Q68DH5 695 aaPredicted RBP15.22■□□□□ 0.03
LIMD1-202ENST00000440097 KAT5Q92993 513 aa15.22■□□□□ 0.03
LIMD1-202ENST00000440097 FAM84AQ96KN4 292 aa15.22■□□□□ 0.03
LIMD1-202ENST00000440097 SPATA33Q96N06 139 aa15.22■□□□□ 0.03
LIMD1-202ENST00000440097 FNBP1Q96RU3 617 aa15.22■□□□□ 0.03
LIMD1-202ENST00000440097 PCYT2Q99447 389 aa15.22■□□□□ 0.03
LIMD1-202ENST00000440097 GPR88Q9GZN0 384 aa15.22■□□□□ 0.03
LIMD1-202ENST00000440097 DHX33Q9H6R0 707 aaKnown RBP15.22■□□□□ 0.03
LIMD1-202ENST00000440097 FAM153AQ9UHL3 310 aa15.22■□□□□ 0.03
LIMD1-202ENST00000440097 KCNG1Q9UIX4 513 aa15.22■□□□□ 0.03
LIMD1-202ENST00000440097 MAPK13O15264 365 aa15.22■□□□□ 0.03
LIMD1-202ENST00000440097 TNNI1P19237 187 aa15.22■□□□□ 0.03
LIMD1-202ENST00000440097 GLRA2P23416 452 aa15.22■□□□□ 0.03
LIMD1-202ENST00000440097 TNFRSF8P28908 595 aa15.22■□□□□ 0.03
LIMD1-202ENST00000440097 COPB2P35606 906 aa15.22■□□□□ 0.03
LIMD1-202ENST00000440097 GJA5P36382 358 aa15.22■□□□□ 0.03
LIMD1-202ENST00000440097 ACOT2P49753 483 aa15.22■□□□□ 0.03
LIMD1-202ENST00000440097 SEC24CP53992 1094 aa15.22■□□□□ 0.03
LIMD1-202ENST00000440097 RNASE9P60153 205 aaKnown RBP15.22■□□□□ 0.03
LIMD1-202ENST00000440097 EPC2Q52LR7 807 aa15.22■□□□□ 0.03
LIMD1-202ENST00000440097 TAS1R3Q7RTX0 852 aa15.22■□□□□ 0.03
LIMD1-202ENST00000440097 PNMA8AQ86V59 439 aaPredicted RBP15.22■□□□□ 0.03
LIMD1-202ENST00000440097 LNX1Q8TBB1 728 aaPredicted RBP15.22■□□□□ 0.03
LIMD1-202ENST00000440097 CTNNBL1Q8WYA6 563 aaPredicted RBP15.22■□□□□ 0.03
LIMD1-202ENST00000440097 TSKSQ9UJT2 592 aa15.22■□□□□ 0.03
LIMD1-202ENST00000440097 PNMA3Q9UL41 463 aa15.22■□□□□ 0.03
LIMD1-202ENST00000440097 NAMPTP43490 491 aa15.21■□□□□ 0.03
LIMD1-202ENST00000440097 CARSP49589 748 aaKnown RBP15.21■□□□□ 0.03
LIMD1-202ENST00000440097 GALCP54803 685 aa15.21■□□□□ 0.03
LIMD1-202ENST00000440097 CYP24A1Q07973 514 aa15.21■□□□□ 0.03
LIMD1-202ENST00000440097 PTGISQ16647 500 aa15.21■□□□□ 0.03
LIMD1-202ENST00000440097 GPAT2Q6NUI2 795 aa15.21■□□□□ 0.03
LIMD1-202ENST00000440097 IQCKQ8N0W5 287 aa15.21■□□□□ 0.03
LIMD1-202ENST00000440097 TAF4BQ92750 862 aa15.21■□□□□ 0.03
LIMD1-202ENST00000440097 MS4A14Q96JA4 679 aa15.21■□□□□ 0.03
LIMD1-202ENST00000440097 MROH8Q9H579 483 aa15.21■□□□□ 0.03
LIMD1-202ENST00000440097 TMEM8AQ9HCN3 771 aa15.21■□□□□ 0.03
LIMD1-202ENST00000440097 NFU1Q9UMS0 254 aa15.21■□□□□ 0.03
LIMD1-202ENST00000440097 GRID2IPA4D2P6 1211 aa15.21■□□□□ 0.03
LIMD1-202ENST00000440097 TXNP10599 105 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms