RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 XRRA1Q6P2D8 792 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 PSRC1Q6PGN9 363 aaPredicted RBP5.18□□□□□ -1.58
EDEM3-203ENST00000439962 HDXQ7Z353 690 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 TRAPPC11Q7Z392 1133 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 CTAGE6Q86UF2 777 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 CTAGE4Q8IX94 777 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 SAMD3Q8N6K7 520 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 RNF149Q8NC42 400 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 TRIM58Q8NG06 486 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 MICAL1Q8TDZ2 1067 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 SNX29Q8TEQ0 813 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 SLC7A3Q8WY07 619 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.18□□□□□ -1.58
EDEM3-203ENST00000439962 TSC1Q92574 1164 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 SLC5A5Q92911 643 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 EMID1Q96A84 441 aaPredicted RBP5.18□□□□□ -1.58
EDEM3-203ENST00000439962 CDK5RAP3Q96JB5 506 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 CNOT6LQ96LI5 555 aaKnown RBP5.18□□□□□ -1.58
EDEM3-203ENST00000439962 CDX2Q99626 313 aaPredicted RBP5.18□□□□□ -1.58
EDEM3-203ENST00000439962 C17orf80Q9BSJ5 609 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 MMTAG2Q9BU76 263 aaKnown RBP5.18□□□□□ -1.58
EDEM3-203ENST00000439962 APOL5Q9BWW9 433 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 BHMT2Q9H2M3 363 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 IGFLR1Q9H665 355 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 ALG13Q9NP73 1137 aaKnown RBP5.18□□□□□ -1.58
EDEM3-203ENST00000439962 NRBP2Q9NSY0 501 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 ZNF446Q9NWS9 450 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 SUCLA2Q9P2R7 463 aaPredicted RBP5.18□□□□□ -1.58
EDEM3-203ENST00000439962 LRWD1Q9UFC0 647 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 MSRAQ9UJ68 235 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 FBXL5Q9UKA1 691 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 ST3GAL5Q9UNP4 418 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 PIN4Q9Y237 131 aaKnown RBP5.18□□□□□ -1.58
EDEM3-203ENST00000439962 PCDHGC5Q9Y5F6 944 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 ZDBF2Q9HCK1 2354 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 FRMPD4Q14CM0 1322 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 SDK1Q7Z5N4 2213 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 EPOPA6NHQ4 379 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 ZBTB42B2RXF5 422 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 FANCGO15287 622 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 HBP1O60381 514 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 SLITRK3O94933 977 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 CYP3A4P08684 503 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 TNFRSF8P28908 595 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 VAV2P52735 878 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 CBX1P83916 185 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 TFF2Q03403 129 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 GRB10Q13322 594 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 LPIN1Q14693 890 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 Q4G0T1 1027 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 VWA3BQ502W6 1294 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 HAUS3Q68CZ6 603 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 CCDC70Q6NSX1 233 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 ZNF746Q6NUN9 644 aaPredicted RBP5.17□□□□□ -1.58
EDEM3-203ENST00000439962 CATSPER3Q86XQ3 398 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 EIF1ADQ8N9N8 165 aaKnown RBP5.17□□□□□ -1.58
EDEM3-203ENST00000439962 SLC17A8Q8NDX2 589 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 CAGE1Q8TC20 777 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 AFAP1L1Q8TED9 768 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 TMEM174Q8WUU8 243 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 PRPF31Q8WWY3 499 aaKnown RBP5.17□□□□□ -1.58
EDEM3-203ENST00000439962 FAM20AQ96MK3 541 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 MAF1Q9H063 256 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 BLZF1Q9H2G9 400 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 MTIF3Q9H2K0 278 aaKnown RBP5.17□□□□□ -1.58
EDEM3-203ENST00000439962 SEMA6BQ9H3T3 888 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 MED4Q9NPJ6 270 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 TAB2Q9NYJ8 693 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 TBC1D7Q9P0N9 293 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 PRDM4Q9UKN5 801 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 LRFN2Q9ULH4 789 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 GDAQ9Y2T3 454 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 LOC102724159A0A0B4J2E5 919 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 TTC26A0AVF1 554 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 CCDC169A6NNP5 214 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 A6NNZ2 444 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 MGEA5O60502 916 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 LGR5O75473 907 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 GFPT2O94808 682 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 TMOD1P28289 359 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 CIITAP33076 1130 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 STX17P56962 302 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 PSMC5P62195 406 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 ASIC1P78348 528 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 MRPS6P82932 125 aaKnown RBP5.17□□□□□ -1.58
EDEM3-203ENST00000439962 PWP2Q15269 919 aaKnown RBP5.17□□□□□ -1.58
EDEM3-203ENST00000439962 TUBB8Q3ZCM7 444 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 ZCWPW2Q504Y3 356 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 SEZ6Q53EL9 994 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 GLE1Q53GS7 698 aaKnown RBP5.17□□□□□ -1.58
EDEM3-203ENST00000439962 MIIPQ5JXC2 388 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 ZNF569Q5MCW4 686 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 C1orf53Q5VUE5 145 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 CATSPER4Q7RTX7 472 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 GLYCTKQ8IVS8 523 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 CCDC65Q8IXS2 484 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 ST13P5Q8NFI4 369 aaPredicted RBP5.17□□□□□ -1.58
EDEM3-203ENST00000439962 ERMNQ8TAM6 284 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 VPS16Q9H269 839 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 MINDY3Q9H8M7 445 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms