RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 TMEM110-MUSTN1A8MSY1 372 aa16.27■□□□□ 0.19
CPSF7-205ENST00000439958 PHKA2P46019 1235 aa16.27■□□□□ 0.19
CPSF7-205ENST00000439958 HTRA3P83110 453 aa16.27■□□□□ 0.19
CPSF7-205ENST00000439958 MYBPC2Q14324 1141 aa16.27■□□□□ 0.19
CPSF7-205ENST00000439958 NFIL3Q16649 462 aa16.27■□□□□ 0.19
CPSF7-205ENST00000439958 IMPG2Q9BZV3 1241 aa16.27■□□□□ 0.19
CPSF7-205ENST00000439958 TSGA10Q9BZW7 698 aa16.27■□□□□ 0.19
CPSF7-205ENST00000439958 MTMR12Q9C0I1 747 aa16.27■□□□□ 0.19
CPSF7-205ENST00000439958 TMEM8AQ9HCN3 771 aa16.27■□□□□ 0.19
CPSF7-205ENST00000439958 GTPBP10A4D1E9 387 aaKnown RBP16.26■□□□□ 0.19
CPSF7-205ENST00000439958 TMEM88BA6NKF7 163 aa16.26■□□□□ 0.19
CPSF7-205ENST00000439958 HNRNPH3P31942 346 aaKnown RBP16.26■□□□□ 0.19
CPSF7-205ENST00000439958 GNASQ5JWF2 1037 aa16.26■□□□□ 0.19
CPSF7-205ENST00000439958 TMEM130Q8N3G9 435 aa16.26■□□□□ 0.19
CPSF7-205ENST00000439958 OR5B17Q8NGF7 314 aa16.26■□□□□ 0.19
CPSF7-205ENST00000439958 NOX5Q96PH1 765 aa16.26■□□□□ 0.19
CPSF7-205ENST00000439958 AIPL1Q9NZN9 384 aa16.26■□□□□ 0.19
CPSF7-205ENST00000439958 HYOU1Q9Y4L1 999 aa16.26■□□□□ 0.19
CPSF7-205ENST00000439958 HTTP42858 3142 aa16.26■□□□□ 0.19
CPSF7-205ENST00000439958 SSU72P8A0A1W2PR75 194 aa16.26■□□□□ 0.19
CPSF7-205ENST00000439958 ZNF185O15231 689 aa16.26■□□□□ 0.19
CPSF7-205ENST00000439958 TOM1L1O75674 476 aa16.26■□□□□ 0.19
CPSF7-205ENST00000439958 TRPA1O75762 1119 aa16.26■□□□□ 0.19
CPSF7-205ENST00000439958 C22orf31O95567 290 aa16.26■□□□□ 0.19
CPSF7-205ENST00000439958 TMEM191BP0C7N4 346 aa16.26■□□□□ 0.19
CPSF7-205ENST00000439958 ZNF200P98182 395 aaPredicted RBP16.26■□□□□ 0.19
CPSF7-205ENST00000439958 TRPC3Q13507 836 aa16.26■□□□□ 0.19
CPSF7-205ENST00000439958 IQSEC1Q6DN90 963 aa16.26■□□□□ 0.19
CPSF7-205ENST00000439958 C16orf70Q9BSU1 422 aa16.26■□□□□ 0.19
CPSF7-205ENST00000439958 MYO1AQ9UBC5 1043 aa16.26■□□□□ 0.19
CPSF7-205ENST00000439958 NXF1Q9UBU9 619 aaKnown RBP16.26■□□□□ 0.19
CPSF7-205ENST00000439958 SALL4Q9UJQ4 1053 aa16.26■□□□□ 0.19
CPSF7-205ENST00000439958 HLA-DRAP01903 254 aa16.25■□□□□ 0.19
CPSF7-205ENST00000439958 TUBB4AP04350 444 aa16.25■□□□□ 0.19
CPSF7-205ENST00000439958 CCDC172P0C7W6 258 aa16.25■□□□□ 0.19
CPSF7-205ENST00000439958 C12orf56Q8IXR9 622 aa16.25■□□□□ 0.19
CPSF7-205ENST00000439958 RHOXF2BP0C7M4 288 aa16.25■□□□□ 0.19
CPSF7-205ENST00000439958 FLT3LGP49771 235 aa16.25■□□□□ 0.19
CPSF7-205ENST00000439958 MFAP3P55082 362 aa16.25■□□□□ 0.19
CPSF7-205ENST00000439958 CDK17Q00537 523 aa16.25■□□□□ 0.19
CPSF7-205ENST00000439958 SMC1BQ8NDV3 1235 aa16.25■□□□□ 0.19
CPSF7-205ENST00000439958 CEP89Q96ST8 783 aa16.25■□□□□ 0.19
CPSF7-205ENST00000439958 OSMRQ99650 979 aa16.25■□□□□ 0.19
CPSF7-205ENST00000439958 RHOXF2Q9BQY4 288 aa16.25■□□□□ 0.19
CPSF7-205ENST00000439958 PLEKHA4Q9H4M7 779 aa16.25■□□□□ 0.19
CPSF7-205ENST00000439958 PTPRJQ12913 1337 aa16.25■□□□□ 0.19
CPSF7-205ENST00000439958 CXCL8P10145 99 aa16.25■□□□□ 0.19
CPSF7-205ENST00000439958 ELNP15502 786 aa16.25■□□□□ 0.19
CPSF7-205ENST00000439958 CCDC181Q5TID7 509 aa16.25■□□□□ 0.19
CPSF7-205ENST00000439958 MAMDC4Q6UXC1 1216 aa16.25■□□□□ 0.19
CPSF7-205ENST00000439958 SLC47A2Q86VL8 602 aa16.25■□□□□ 0.19
CPSF7-205ENST00000439958 TMEM192Q8IY95 271 aa16.25■□□□□ 0.19
CPSF7-205ENST00000439958 MORC4Q8TE76 937 aa16.25■□□□□ 0.19
CPSF7-205ENST00000439958 C2orf40Q9H1Z8 148 aa16.25■□□□□ 0.19
CPSF7-205ENST00000439958 NAGPAQ9UK23 515 aa16.25■□□□□ 0.19
CPSF7-205ENST00000439958 MYO6Q9UM54 1294 aa16.25■□□□□ 0.19
CPSF7-205ENST00000439958 MSCO60682 206 aa16.24■□□□□ 0.19
CPSF7-205ENST00000439958 SGPL1O95470 568 aa16.24■□□□□ 0.19
CPSF7-205ENST00000439958 H2AFZP0C0S5 128 aa16.24■□□□□ 0.19
CPSF7-205ENST00000439958 CDR1P51861 262 aa16.24■□□□□ 0.19
CPSF7-205ENST00000439958 ZNF484Q5JVG2 852 aa16.24■□□□□ 0.19
CPSF7-205ENST00000439958 C17orf99Q6UX52 265 aa16.24■□□□□ 0.19
CPSF7-205ENST00000439958 H2AFVQ71UI9 128 aa16.24■□□□□ 0.19
CPSF7-205ENST00000439958 PALB2Q86YC2 1186 aa16.24■□□□□ 0.19
CPSF7-205ENST00000439958 RPUSD2Q8IZ73 545 aaKnown RBP16.24■□□□□ 0.19
CPSF7-205ENST00000439958 LMBR1Q8WVP7 490 aa16.24■□□□□ 0.19
CPSF7-205ENST00000439958 ERO1AQ96HE7 468 aa16.24■□□□□ 0.19
CPSF7-205ENST00000439958 SMARCAL1Q9NZC9 954 aa16.24■□□□□ 0.19
CPSF7-205ENST00000439958 GABRQQ9UN88 632 aa16.24■□□□□ 0.19
CPSF7-205ENST00000439958 A0A0B4J269 797 aa16.24■□□□□ 0.19
CPSF7-205ENST00000439958 IQCF3P0C7M6 154 aa16.24■□□□□ 0.19
CPSF7-205ENST00000439958 SNRPFP62306 86 aaKnown RBP16.24■□□□□ 0.19
CPSF7-205ENST00000439958 MRPS25P82663 173 aaKnown RBP16.24■□□□□ 0.19
CPSF7-205ENST00000439958 NFRKBQ6P4R8 1299 aa16.24■□□□□ 0.19
CPSF7-205ENST00000439958 CATSPER4Q7RTX7 472 aa16.24■□□□□ 0.19
CPSF7-205ENST00000439958 PASD1Q8IV76 773 aa16.24■□□□□ 0.19
CPSF7-205ENST00000439958 EXOC8Q8IYI6 725 aa16.24■□□□□ 0.19
CPSF7-205ENST00000439958 ZNF516Q92618 1163 aa16.24■□□□□ 0.19
CPSF7-205ENST00000439958 TRIM6Q9C030 488 aaPredicted RBP16.24■□□□□ 0.19
CPSF7-205ENST00000439958 KIAA1586Q9HCI6 787 aa16.24■□□□□ 0.19
CPSF7-205ENST00000439958 SAR1BQ9Y6B6 198 aa16.24■□□□□ 0.19
CPSF7-205ENST00000439958 BZW2Q9Y6E2 419 aaKnown RBP16.24■□□□□ 0.19
CPSF7-205ENST00000439958 PALMO75781 387 aa16.24■□□□□ 0.19
CPSF7-205ENST00000439958 LDHAP00338 332 aaKnown RBP16.24■□□□□ 0.19
CPSF7-205ENST00000439958 CYP2C9P11712 490 aa16.24■□□□□ 0.19
CPSF7-205ENST00000439958 C2CD6Q53TS8 623 aa16.24■□□□□ 0.19
CPSF7-205ENST00000439958 TDRD10Q5VZ19 366 aaKnown RBP16.24■□□□□ 0.19
CPSF7-205ENST00000439958 MTHFD1LQ6UB35 978 aa16.24■□□□□ 0.19
CPSF7-205ENST00000439958 DNAJB3Q8WWF6 145 aa16.24■□□□□ 0.19
CPSF7-205ENST00000439958 SYN2Q92777 582 aaPredicted RBP16.24■□□□□ 0.19
CPSF7-205ENST00000439958 ACO2Q99798 780 aaKnown RBP16.24■□□□□ 0.19
CPSF7-205ENST00000439958 TAS2R14Q9NYV8 317 aa16.24■□□□□ 0.19
CPSF7-205ENST00000439958 ATMINO43313 823 aaPredicted RBP16.23■□□□□ 0.19
CPSF7-205ENST00000439958 NCBP1Q09161 790 aaKnown RBP16.23■□□□□ 0.19
CPSF7-205ENST00000439958 SCARA3Q6AZY7 606 aa16.23■□□□□ 0.19
CPSF7-205ENST00000439958 CXCL17Q6UXB2 119 aa16.23■□□□□ 0.19
CPSF7-205ENST00000439958 TXLNBQ8N3L3 684 aa16.23■□□□□ 0.19
CPSF7-205ENST00000439958 TRIM58Q8NG06 486 aa16.23■□□□□ 0.19
CPSF7-205ENST00000439958 CTNNBL1Q8WYA6 563 aaPredicted RBP16.23■□□□□ 0.19
CPSF7-205ENST00000439958 KAT6AQ92794 2004 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms