RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 VCAM1P19320 739 aa12.47□□□□□ -0.41
SMPD4-209ENST00000439886 MYL7Q01449 175 aa12.47□□□□□ -0.41
SMPD4-209ENST00000439886 TAF1BQ53T94 588 aaPredicted RBP12.47□□□□□ -0.41
SMPD4-209ENST00000439886 NANOGNBQ7Z5D8 188 aa12.47□□□□□ -0.41
SMPD4-209ENST00000439886 FRMD5Q7Z6J6 570 aa12.47□□□□□ -0.41
SMPD4-209ENST00000439886 METTL14Q9HCE5 456 aaKnown RBP12.47□□□□□ -0.41
SMPD4-209ENST00000439886 NAALADL1Q9UQQ1 740 aa12.47□□□□□ -0.41
SMPD4-209ENST00000439886 PITPNM2Q9BZ72 1349 aa12.47□□□□□ -0.41
SMPD4-209ENST00000439886 KDM3AQ9Y4C1 1321 aa12.47□□□□□ -0.41
SMPD4-209ENST00000439886 GOLGA8SH3BPF8 625 aa12.46□□□□□ -0.41
SMPD4-209ENST00000439886 GOLGA8MH3BSY2 632 aa12.46□□□□□ -0.41
SMPD4-209ENST00000439886 TXNDC9O14530 226 aa12.46□□□□□ -0.41
SMPD4-209ENST00000439886 ATP9AO75110 1047 aa12.46□□□□□ -0.41
SMPD4-209ENST00000439886 IFNB1P01574 187 aa12.46□□□□□ -0.41
SMPD4-209ENST00000439886 TMEM253P0C7T8 217 aa12.46□□□□□ -0.41
SMPD4-209ENST00000439886 SKIP12755 728 aa12.46□□□□□ -0.41
SMPD4-209ENST00000439886 CDR2Q01850 454 aa12.46□□□□□ -0.41
SMPD4-209ENST00000439886 MAP7D1Q3KQU3 841 aa12.46□□□□□ -0.41
SMPD4-209ENST00000439886 ANKRD35Q8N283 1001 aa12.46□□□□□ -0.41
SMPD4-209ENST00000439886 CKAP2Q8WWK9 683 aa12.46□□□□□ -0.41
SMPD4-209ENST00000439886 CNKSR1Q969H4 720 aa12.46□□□□□ -0.41
SMPD4-209ENST00000439886 FAM163AQ96GL9 167 aaPredicted RBP12.46□□□□□ -0.41
SMPD4-209ENST00000439886 RUSC1Q9BVN2 902 aa12.46□□□□□ -0.41
SMPD4-209ENST00000439886 CCDC87Q9NVE4 849 aa12.46□□□□□ -0.41
SMPD4-209ENST00000439886 SRCAPQ6ZRS2 3230 aa12.46□□□□□ -0.41
SMPD4-209ENST00000439886 USP17L10C9JJH3 530 aa12.46□□□□□ -0.41
SMPD4-209ENST00000439886 CAPN9O14815 690 aa12.46□□□□□ -0.41
SMPD4-209ENST00000439886 OPHN1O60890 802 aa12.46□□□□□ -0.41
SMPD4-209ENST00000439886 SSTR3P32745 418 aaPredicted RBP12.46□□□□□ -0.41
SMPD4-209ENST00000439886 EPHA7Q15375 998 aa12.46□□□□□ -0.41
SMPD4-209ENST00000439886 DAB2IPQ5VWQ8 1189 aa12.46□□□□□ -0.41
SMPD4-209ENST00000439886 MTDHQ86UE4 582 aaKnown RBP12.46□□□□□ -0.41
SMPD4-209ENST00000439886 TEX9Q8N6V9 391 aa12.46□□□□□ -0.41
SMPD4-209ENST00000439886 TTC1Q99614 292 aa12.46□□□□□ -0.41
SMPD4-209ENST00000439886 CENPOQ9BU64 300 aa12.46□□□□□ -0.41
SMPD4-209ENST00000439886 KCTD10Q9H3F6 313 aa12.46□□□□□ -0.41
SMPD4-209ENST00000439886 STXBP5LQ9Y2K9 1186 aa12.46□□□□□ -0.41
SMPD4-209ENST00000439886 GYG2O15488 501 aa12.46□□□□□ -0.42
SMPD4-209ENST00000439886 GAS8O95995 478 aa12.46□□□□□ -0.42
SMPD4-209ENST00000439886 KRT5P13647 590 aa12.46□□□□□ -0.42
SMPD4-209ENST00000439886 ETS2P15036 469 aa12.46□□□□□ -0.42
SMPD4-209ENST00000439886 TAL1P17542 331 aaPredicted RBP12.46□□□□□ -0.42
SMPD4-209ENST00000439886 PSMC2P35998 433 aaKnown RBP12.46□□□□□ -0.42
SMPD4-209ENST00000439886 BTDP43251 543 aa12.46□□□□□ -0.42
SMPD4-209ENST00000439886 UBXN2AP68543 259 aa12.46□□□□□ -0.42
SMPD4-209ENST00000439886 RRP1BQ14684 758 aaKnown RBP12.46□□□□□ -0.42
SMPD4-209ENST00000439886 MYBPC3Q14896 1274 aa12.46□□□□□ -0.42
SMPD4-209ENST00000439886 FYB2Q5VWT5 728 aa12.46□□□□□ -0.42
SMPD4-209ENST00000439886 VSTM1Q6UX27 236 aa12.46□□□□□ -0.42
SMPD4-209ENST00000439886 TBC1D16Q8TBP0 767 aa12.46□□□□□ -0.42
SMPD4-209ENST00000439886 HAS1Q92839 578 aa12.46□□□□□ -0.42
SMPD4-209ENST00000439886 SLC35C1Q96A29 364 aa12.46□□□□□ -0.42
SMPD4-209ENST00000439886 SPZ1Q9BXG8 430 aa12.46□□□□□ -0.42
SMPD4-209ENST00000439886 UBE2OQ9C0C9 1292 aaKnown RBP12.46□□□□□ -0.42
SMPD4-209ENST00000439886 SAYSD1Q9NPB0 183 aa12.46□□□□□ -0.42
SMPD4-209ENST00000439886 BTG4Q9NY30 223 aa12.46□□□□□ -0.42
SMPD4-209ENST00000439886 CYP39A1Q9NYL5 469 aa12.46□□□□□ -0.42
SMPD4-209ENST00000439886 STOML1Q9UBI4 398 aa12.46□□□□□ -0.42
SMPD4-209ENST00000439886 MYH3P11055 1940 aa12.45□□□□□ -0.42
SMPD4-209ENST00000439886 ERVV-1B6SEH8 477 aa12.45□□□□□ -0.42
SMPD4-209ENST00000439886 CALCAP01258 141 aa12.45□□□□□ -0.42
SMPD4-209ENST00000439886 FOXN2P32314 431 aa12.45□□□□□ -0.42
SMPD4-209ENST00000439886 CETN2P41208 172 aa12.45□□□□□ -0.42
SMPD4-209ENST00000439886 GCLMP48507 274 aa12.45□□□□□ -0.42
SMPD4-209ENST00000439886 GRIK5Q16478 980 aa12.45□□□□□ -0.42
SMPD4-209ENST00000439886 EPC2Q52LR7 807 aa12.45□□□□□ -0.42
SMPD4-209ENST00000439886 PARP10Q53GL7 1025 aa12.45□□□□□ -0.42
SMPD4-209ENST00000439886 MIGA2Q7L4E1 593 aa12.45□□□□□ -0.42
SMPD4-209ENST00000439886 SLC51AQ86UW1 340 aa12.45□□□□□ -0.42
SMPD4-209ENST00000439886 CCNJLQ8IV13 435 aa12.45□□□□□ -0.42
SMPD4-209ENST00000439886 GALNT15Q8N3T1 639 aa12.45□□□□□ -0.42
SMPD4-209ENST00000439886 CFAP61Q8NHU2 1237 aa12.45□□□□□ -0.42
SMPD4-209ENST00000439886 CCDC127Q96BQ5 260 aa12.45□□□□□ -0.42
SMPD4-209ENST00000439886 NUP85Q9BW27 656 aa12.45□□□□□ -0.42
SMPD4-209ENST00000439886 INTS2Q9H0H0 1204 aaKnown RBP12.45□□□□□ -0.42
SMPD4-209ENST00000439886 ZBTB21Q9ULJ3 1066 aa12.45□□□□□ -0.42
SMPD4-209ENST00000439886 TMEM94Q12767 1356 aa12.45□□□□□ -0.42
SMPD4-209ENST00000439886 KRT36O76013 467 aa12.45□□□□□ -0.42
SMPD4-209ENST00000439886 MGAT5Q09328 741 aa12.45□□□□□ -0.42
SMPD4-209ENST00000439886 CETN1Q12798 172 aa12.45□□□□□ -0.42
SMPD4-209ENST00000439886 SNX30Q5VWJ9 437 aa12.45□□□□□ -0.42
SMPD4-209ENST00000439886 RFWD3Q6PCD5 774 aa12.45□□□□□ -0.42
SMPD4-209ENST00000439886 PPP1R21Q6ZMI0 780 aa12.45□□□□□ -0.42
SMPD4-209ENST00000439886 SLC13A5Q86YT5 568 aaPredicted RBP12.45□□□□□ -0.42
SMPD4-209ENST00000439886 AGGF1Q8N302 714 aaeCLIP12.45□□□□□ -0.42
SMPD4-209ENST00000439886 SMC6Q96SB8 1091 aa12.45□□□□□ -0.42
SMPD4-209ENST00000439886 AGPAT1Q99943 283 aa12.45□□□□□ -0.42
SMPD4-209ENST00000439886 DENND2DQ9H6A0 471 aaPredicted RBP12.45□□□□□ -0.42
SMPD4-209ENST00000439886 MARF1Q9Y4F3 1742 aaKnown RBP12.45□□□□□ -0.42
SMPD4-209ENST00000439886 DDX39AO00148 427 aaKnown RBP12.44□□□□□ -0.42
SMPD4-209ENST00000439886 LSM1O15116 133 aaKnown RBP12.44□□□□□ -0.42
SMPD4-209ENST00000439886 TTLL1O95922 423 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 SLURP2P0DP57 97 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 FUT4P22083 530 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 CACNA2D1P54289 1103 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 GPC5P78333 572 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 MTHFD1LQ6UB35 978 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 SCG3Q8WXD2 468 aaKnown RBP12.44□□□□□ -0.42
SMPD4-209ENST00000439886 HAUS1Q96CS2 278 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 ZSWIM1Q9BR11 485 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms