RNA–Protein interactions for RNA: ENST00000436769.5

COL6A2-206, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 2

Gene COL6A2, Length 919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-206ENST00000436769 NOSTRINQ8IVI9 506 aa22.34■■□□□ 1.17
COL6A2-206ENST00000436769 TMEM105Q8N8V8 129 aa22.34■■□□□ 1.17
COL6A2-206ENST00000436769 ERMNQ8TAM6 284 aa22.34■■□□□ 1.17
COL6A2-206ENST00000436769 ZNF707Q96C28 371 aaPredicted RBP22.34■■□□□ 1.17
COL6A2-206ENST00000436769 C2orf40Q9H1Z8 148 aa22.34■■□□□ 1.17
COL6A2-206ENST00000436769 KCNK12Q9HB15 430 aa22.34■■□□□ 1.17
COL6A2-206ENST00000436769 WDR6Q9NNW5 1121 aaKnown RBP22.34■■□□□ 1.17
COL6A2-206ENST00000436769 SNTG2Q9NY99 539 aa22.34■■□□□ 1.17
COL6A2-206ENST00000436769 FNIP2Q9P278 1114 aa22.34■■□□□ 1.17
COL6A2-206ENST00000436769 DPP7Q9UHL4 492 aa22.34■■□□□ 1.17
COL6A2-206ENST00000436769 ACKR2O00590 384 aa22.33■■□□□ 1.17
COL6A2-206ENST00000436769 PTGESO14684 152 aa22.33■■□□□ 1.17
COL6A2-206ENST00000436769 TGM5O43548 720 aa22.33■■□□□ 1.17
COL6A2-206ENST00000436769 NAMPTP43490 491 aa22.33■■□□□ 1.17
COL6A2-206ENST00000436769 RBM25P49756 843 aaKnown RBP22.33■■□□□ 1.17
COL6A2-206ENST00000436769 FXR2P51116 673 aaKnown RBP eCLIP22.33■■□□□ 1.17
COL6A2-206ENST00000436769 TUSC3Q13454 348 aa22.33■■□□□ 1.17
COL6A2-206ENST00000436769 PRPF4BQ13523 1007 aaKnown RBP22.33■■□□□ 1.17
COL6A2-206ENST00000436769 PALB2Q86YC2 1186 aa22.33■■□□□ 1.17
COL6A2-206ENST00000436769 POLD4Q9HCU8 107 aa22.33■■□□□ 1.17
COL6A2-206ENST00000436769 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.33■■□□□ 1.17
COL6A2-206ENST00000436769 ARHGEF35A5YM69 484 aa22.32■■□□□ 1.16
COL6A2-206ENST00000436769 N4BP3O15049 544 aa22.32■■□□□ 1.16
COL6A2-206ENST00000436769 TADA2AO75478 443 aa22.32■■□□□ 1.16
COL6A2-206ENST00000436769 TRAPPC10P48553 1259 aa22.32■■□□□ 1.16
COL6A2-206ENST00000436769 HMGN5P82970 282 aaKnown RBP22.32■■□□□ 1.16
COL6A2-206ENST00000436769 TDGQ13569 410 aa22.32■■□□□ 1.16
COL6A2-206ENST00000436769 HSP90AA2PQ14568 343 aaPredicted RBP22.32■■□□□ 1.16
COL6A2-206ENST00000436769 NBR1Q14596 966 aa22.32■■□□□ 1.16
COL6A2-206ENST00000436769 MAPK6Q16659 721 aa22.32■■□□□ 1.16
COL6A2-206ENST00000436769 RIN2Q8WYP3 895 aaPredicted RBP22.32■■□□□ 1.16
COL6A2-206ENST00000436769 ZSCAN31Q96LW9 406 aaPredicted RBP22.32■■□□□ 1.16
COL6A2-206ENST00000436769 PLEKHA4Q9H4M7 779 aa22.32■■□□□ 1.16
COL6A2-206ENST00000436769 VWA8A3KMH1 1905 aa22.31■■□□□ 1.16
COL6A2-206ENST00000436769 RIF1Q5UIP0 2472 aaKnown RBP22.31■■□□□ 1.16
COL6A2-206ENST00000436769 GALR2O43603 387 aaPredicted RBP22.31■■□□□ 1.16
COL6A2-206ENST00000436769 PRKCBP05771 671 aa22.31■■□□□ 1.16
COL6A2-206ENST00000436769 RPL17P18621 184 aaKnown RBP22.31■■□□□ 1.16
COL6A2-206ENST00000436769 U2AF2P26368 475 aaKnown RBP eCLIP22.31■■□□□ 1.16
COL6A2-206ENST00000436769 TOB1P50616 345 aaPredicted RBP22.31■■□□□ 1.16
COL6A2-206ENST00000436769 RTP2Q5QGT7 225 aa22.31■■□□□ 1.16
COL6A2-206ENST00000436769 EEF1DP3Q658K8 133 aa22.31■■□□□ 1.16
COL6A2-206ENST00000436769 NT5C3AQ9H0P0 336 aa22.31■■□□□ 1.16
COL6A2-206ENST00000436769 FAM86C1Q9NVL1 165 aa22.31■■□□□ 1.16
COL6A2-206ENST00000436769 CASTOR2A6NHX0 329 aa22.3■■□□□ 1.16
COL6A2-206ENST00000436769 H0Y858 1186 aa22.3■■□□□ 1.16
COL6A2-206ENST00000436769 RECQL4O94761 1208 aa22.3■■□□□ 1.16
COL6A2-206ENST00000436769 CCT6AP40227 531 aaKnown RBP22.3■■□□□ 1.16
COL6A2-206ENST00000436769 PDIA5Q14554 519 aa22.3■■□□□ 1.16
COL6A2-206ENST00000436769 HAUS3Q68CZ6 603 aa22.3■■□□□ 1.16
COL6A2-206ENST00000436769 ASTLQ6HA08 431 aaPredicted RBP22.3■■□□□ 1.16
COL6A2-206ENST00000436769 ELMSAN1Q6PJG2 1045 aa22.3■■□□□ 1.16
COL6A2-206ENST00000436769 PRSS55Q6UWB4 352 aaPredicted RBP22.3■■□□□ 1.16
COL6A2-206ENST00000436769 DEPTORQ8TB45 409 aa22.3■■□□□ 1.16
COL6A2-206ENST00000436769 SMG7Q92540 1137 aaKnown RBP22.3■■□□□ 1.16
COL6A2-206ENST00000436769 KIFC3Q9BVG8 833 aa22.3■■□□□ 1.16
COL6A2-206ENST00000436769 BHMT2Q9H2M3 363 aa22.3■■□□□ 1.16
COL6A2-206ENST00000436769 SH2B1Q9NRF2 756 aaPredicted RBP22.3■■□□□ 1.16
COL6A2-206ENST00000436769 IGSF9Q9P2J2 1179 aa22.3■■□□□ 1.16
COL6A2-206ENST00000436769 DUSP12Q9UNI6 340 aa22.3■■□□□ 1.16
COL6A2-206ENST00000436769 CLUHO75153 1309 aa22.3■■□□□ 1.16
COL6A2-206ENST00000436769 PTPRZ1P23471 2315 aaPredicted RBP22.29■■□□□ 1.16
COL6A2-206ENST00000436769 KIF4AO95239 1232 aa22.29■■□□□ 1.16
COL6A2-206ENST00000436769 THP07101 528 aa22.29■■□□□ 1.16
COL6A2-206ENST00000436769 NPR3P17342 541 aa22.29■■□□□ 1.16
COL6A2-206ENST00000436769 CLCN5P51795 746 aa22.29■■□□□ 1.16
COL6A2-206ENST00000436769 PPP2R5AQ15172 486 aa22.29■■□□□ 1.16
COL6A2-206ENST00000436769 NT5DC1Q5TFE4 455 aa22.29■■□□□ 1.16
COL6A2-206ENST00000436769 GLYCTKQ8IVS8 523 aa22.29■■□□□ 1.16
COL6A2-206ENST00000436769 IGSF22Q8N9C0 903 aa22.29■■□□□ 1.16
COL6A2-206ENST00000436769 FAM184AQ8NB25 1140 aa22.29■■□□□ 1.16
COL6A2-206ENST00000436769 LNX1Q8TBB1 728 aaPredicted RBP22.29■■□□□ 1.16
COL6A2-206ENST00000436769 HASPINQ8TF76 798 aa22.29■■□□□ 1.16
COL6A2-206ENST00000436769 MYADMQ96S97 322 aa22.29■■□□□ 1.16
COL6A2-206ENST00000436769 CLSTN3Q9BQT9 956 aa22.29■■□□□ 1.16
COL6A2-206ENST00000436769 PRKD2Q9BZL6 878 aa22.29■■□□□ 1.16
COL6A2-206ENST00000436769 IRF2BPLQ9H1B7 796 aa22.29■■□□□ 1.16
COL6A2-206ENST00000436769 ZDHHC7Q9NXF8 308 aa22.29■■□□□ 1.16
COL6A2-206ENST00000436769 EPS15L1Q9UBC2 864 aa22.29■■□□□ 1.16
COL6A2-206ENST00000436769 LRWD1Q9UFC0 647 aa22.29■■□□□ 1.16
COL6A2-206ENST00000436769 KIAA1024Q9UPX6 916 aa22.29■■□□□ 1.16
COL6A2-206ENST00000436769 SF3B1O75533 1304 aaKnown RBP eCLIP22.29■■□□□ 1.16
COL6A2-206ENST00000436769 CREMQ03060 361 aa22.28■■□□□ 1.16
COL6A2-206ENST00000436769 CWF19L1Q69YN2 538 aaKnown RBP22.28■■□□□ 1.16
COL6A2-206ENST00000436769 RSAD2Q8WXG1 361 aa22.28■■□□□ 1.16
COL6A2-206ENST00000436769 STAMQ92783 540 aa22.28■■□□□ 1.16
COL6A2-206ENST00000436769 ATOH1Q92858 354 aaPredicted RBP22.28■■□□□ 1.16
COL6A2-206ENST00000436769 ADPGKQ9BRR6 497 aa22.28■■□□□ 1.16
COL6A2-206ENST00000436769 NOL7Q9UMY1 257 aaKnown RBP22.28■■□□□ 1.16
COL6A2-206ENST00000436769 PCDHB6Q9Y5E3 794 aa22.28■■□□□ 1.16
COL6A2-206ENST00000436769 NARSO43776 548 aaKnown RBP22.27■■□□□ 1.16
COL6A2-206ENST00000436769 ZMYND10O75800 440 aa22.27■■□□□ 1.16
COL6A2-206ENST00000436769 LIG1P18858 919 aa22.27■■□□□ 1.16
COL6A2-206ENST00000436769 IGFBP6P24592 240 aaPredicted RBP22.27■■□□□ 1.16
COL6A2-206ENST00000436769 GBP2P32456 591 aaPredicted RBP22.27■■□□□ 1.16
COL6A2-206ENST00000436769 EFNA5P52803 228 aa22.27■■□□□ 1.16
COL6A2-206ENST00000436769 PTGDRQ13258 359 aa22.27■■□□□ 1.16
COL6A2-206ENST00000436769 GNL2Q13823 731 aaKnown RBP22.27■■□□□ 1.16
COL6A2-206ENST00000436769 IL17AQ16552 155 aa22.27■■□□□ 1.16
COL6A2-206ENST00000436769 FAM171A1Q5VUB5 890 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms