RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 CCDC127Q96BQ5 260 aa23.23■■□□□ 1.31
YBX1-203ENST00000436427 CCDC51Q96ER9 411 aa23.23■■□□□ 1.31
YBX1-203ENST00000436427 MFSD14AQ96MC6 490 aa23.23■■□□□ 1.31
YBX1-203ENST00000436427 EIF2AQ9BY44 585 aaKnown RBP23.23■■□□□ 1.31
YBX1-203ENST00000436427 NDST4Q9H3R1 872 aa23.23■■□□□ 1.31
YBX1-203ENST00000436427 RTN4Q9NQC3 1192 aaKnown RBP23.23■■□□□ 1.31
YBX1-203ENST00000436427 TMEM39AQ9NV64 488 aa23.23■■□□□ 1.31
YBX1-203ENST00000436427 LGALS16A8MUM7 142 aa23.22■■□□□ 1.31
YBX1-203ENST00000436427 CLTBP09497 229 aa23.22■■□□□ 1.31
YBX1-203ENST00000436427 TRIM49P0CI25 452 aa23.22■■□□□ 1.31
YBX1-203ENST00000436427 TRIM49CP0CI26 452 aa23.22■■□□□ 1.31
YBX1-203ENST00000436427 UBXN1Q04323 297 aa23.22■■□□□ 1.31
YBX1-203ENST00000436427 PPP2R3AQ06190 1150 aa23.22■■□□□ 1.31
YBX1-203ENST00000436427 NR1I3Q14994 352 aa23.22■■□□□ 1.31
YBX1-203ENST00000436427 HS1BP3Q53T59 392 aa23.22■■□□□ 1.31
YBX1-203ENST00000436427 SLC35C1Q96A29 364 aa23.22■■□□□ 1.31
YBX1-203ENST00000436427 MRFAP1L1Q96HT8 127 aa23.22■■□□□ 1.31
YBX1-203ENST00000436427 INTS13Q9NVM9 706 aa23.22■■□□□ 1.31
YBX1-203ENST00000436427 CPSF3Q9UKF6 684 aaKnown RBP23.22■■□□□ 1.31
YBX1-203ENST00000436427 TEX33O43247 280 aa23.21■■□□□ 1.31
YBX1-203ENST00000436427 STAG3L1P0CL83 205 aa23.21■■□□□ 1.31
YBX1-203ENST00000436427 ZSCAN20P17040 1043 aaPredicted RBP23.21■■□□□ 1.31
YBX1-203ENST00000436427 DLG4P78352 724 aa23.21■■□□□ 1.31
YBX1-203ENST00000436427 KCNH2Q12809 1159 aa23.21■■□□□ 1.31
YBX1-203ENST00000436427 PTPN21Q16825 1174 aa23.21■■□□□ 1.31
YBX1-203ENST00000436427 USP37Q86T82 979 aa23.21■■□□□ 1.31
YBX1-203ENST00000436427 MMRN2Q9H8L6 949 aa23.21■■□□□ 1.31
YBX1-203ENST00000436427 CHST12Q9NRB3 414 aa23.21■■□□□ 1.31
YBX1-203ENST00000436427 AFPP02771 609 aaKnown RBP23.2■■□□□ 1.3
YBX1-203ENST00000436427 DLATP10515 647 aaKnown RBP23.2■■□□□ 1.3
YBX1-203ENST00000436427 KYAT1Q16773 422 aa23.2■■□□□ 1.3
YBX1-203ENST00000436427 FKBP15Q5T1M5 1219 aa23.2■■□□□ 1.3
YBX1-203ENST00000436427 BRSK2Q8IWQ3 736 aa23.2■■□□□ 1.3
YBX1-203ENST00000436427 TMEM192Q8IY95 271 aa23.2■■□□□ 1.3
YBX1-203ENST00000436427 PLEKHO2Q8TD55 490 aa23.2■■□□□ 1.3
YBX1-203ENST00000436427 FAM212AQ96EL1 285 aa23.2■■□□□ 1.3
YBX1-203ENST00000436427 IFIH1Q9BYX4 1025 aaKnown RBP23.2■■□□□ 1.3
YBX1-203ENST00000436427 TBX21Q9UL17 535 aa23.2■■□□□ 1.3
YBX1-203ENST00000436427 CLTAP09496 248 aa23.19■■□□□ 1.3
YBX1-203ENST00000436427 CCL23P55773 120 aa23.19■■□□□ 1.3
YBX1-203ENST00000436427 PSMD6Q15008 389 aa23.19■■□□□ 1.3
YBX1-203ENST00000436427 UBXN11Q5T124 520 aa23.19■■□□□ 1.3
YBX1-203ENST00000436427 UBE2Q1Q7Z7E8 422 aa23.19■■□□□ 1.3
YBX1-203ENST00000436427 TMC2Q8TDI7 906 aa23.19■■□□□ 1.3
YBX1-203ENST00000436427 PARD3BQ8TEW8 1205 aa23.19■■□□□ 1.3
YBX1-203ENST00000436427 SCLYQ96I15 445 aa23.19■■□□□ 1.3
YBX1-203ENST00000436427 FNBP1Q96RU3 617 aa23.19■■□□□ 1.3
YBX1-203ENST00000436427 CCDC94Q9BW85 323 aaPredicted RBP23.19■■□□□ 1.3
YBX1-203ENST00000436427 RPF1Q9H9Y2 349 aaKnown RBP23.19■■□□□ 1.3
YBX1-203ENST00000436427 PRDM5Q9NQX1 630 aaPredicted RBP23.19■■□□□ 1.3
YBX1-203ENST00000436427 NBNO60934 754 aa23.18■■□□□ 1.3
YBX1-203ENST00000436427 CXCL8P10145 99 aa23.18■■□□□ 1.3
YBX1-203ENST00000436427 CYP2C18P33260 490 aa23.18■■□□□ 1.3
YBX1-203ENST00000436427 GRM5P41594 1212 aa23.18■■□□□ 1.3
YBX1-203ENST00000436427 ENOX2Q16206 610 aaKnown RBP23.18■■□□□ 1.3
YBX1-203ENST00000436427 DRC7Q8IY82 874 aa23.18■■□□□ 1.3
YBX1-203ENST00000436427 ACAP3Q96P50 834 aa23.18■■□□□ 1.3
YBX1-203ENST00000436427 POP1Q99575 1024 aaKnown RBP23.18■■□□□ 1.3
YBX1-203ENST00000436427 APOL6Q9BWW8 343 aa23.18■■□□□ 1.3
YBX1-203ENST00000436427 TMX1Q9H3N1 280 aa23.18■■□□□ 1.3
YBX1-203ENST00000436427 NXF3Q9H4D5 531 aaKnown RBP23.18■■□□□ 1.3
YBX1-203ENST00000436427 PDE11AQ9HCR9 933 aa23.18■■□□□ 1.3
YBX1-203ENST00000436427 HES2Q9Y543 173 aa23.18■■□□□ 1.3
YBX1-203ENST00000436427 LRRIQ3A6PVS8 624 aaPredicted RBP23.18■■□□□ 1.3
YBX1-203ENST00000436427 WNT7BP56706 349 aa23.18■■□□□ 1.3
YBX1-203ENST00000436427 WNT8AQ9H1J5 351 aa23.18■■□□□ 1.3
YBX1-203ENST00000436427 SNTG2Q9NY99 539 aa23.18■■□□□ 1.3
YBX1-203ENST00000436427 TANC1Q9C0D5 1861 aa23.17■■□□□ 1.3
YBX1-203ENST00000436427 STX10O60499 249 aa23.17■■□□□ 1.3
YBX1-203ENST00000436427 MGEA5O60502 916 aa23.17■■□□□ 1.3
YBX1-203ENST00000436427 TNNI1P19237 187 aa23.17■■□□□ 1.3
YBX1-203ENST00000436427 COL13A1Q5TAT6 717 aaPredicted RBP23.17■■□□□ 1.3
YBX1-203ENST00000436427 ADAM2Q99965 735 aa23.17■■□□□ 1.3
YBX1-203ENST00000436427 TOPORSQ9NS56 1045 aaPredicted RBP23.17■■□□□ 1.3
YBX1-203ENST00000436427 FAM105AQ9NUU6 356 aa23.17■■□□□ 1.3
YBX1-203ENST00000436427 IPPQ9Y573 584 aa23.17■■□□□ 1.3
YBX1-203ENST00000436427 GCLMP48507 274 aa23.16■■□□□ 1.3
YBX1-203ENST00000436427 FMO5P49326 533 aa23.16■■□□□ 1.3
YBX1-203ENST00000436427 YARSP54577 528 aaKnown RBP23.16■■□□□ 1.3
YBX1-203ENST00000436427 ENPEPQ07075 957 aa23.16■■□□□ 1.3
YBX1-203ENST00000436427 C1orf220Q5T0J3 134 aa23.16■■□□□ 1.3
YBX1-203ENST00000436427 LMBRD2Q68DH5 695 aaPredicted RBP23.16■■□□□ 1.3
YBX1-203ENST00000436427 PCDHB2Q9Y5E7 798 aa23.16■■□□□ 1.3
YBX1-203ENST00000436427 MKI67P46013 3256 aaKnown RBP23.16■■□□□ 1.3
YBX1-203ENST00000436427 IL18RAPO95256 599 aa23.15■■□□□ 1.3
YBX1-203ENST00000436427 PARNO95453 639 aaKnown RBP23.15■■□□□ 1.3
YBX1-203ENST00000436427 PTMAP06454 111 aaKnown RBP23.15■■□□□ 1.3
YBX1-203ENST00000436427 CDC25BP30305 580 aa23.15■■□□□ 1.3
YBX1-203ENST00000436427 PPP3CAQ08209 521 aa23.15■■□□□ 1.3
YBX1-203ENST00000436427 DSC3Q14574 896 aa23.15■■□□□ 1.3
YBX1-203ENST00000436427 GPNMBQ14956 572 aa23.15■■□□□ 1.3
YBX1-203ENST00000436427 SURF1Q15526 300 aa23.15■■□□□ 1.3
YBX1-203ENST00000436427 TMC6Q7Z403 805 aa23.15■■□□□ 1.3
YBX1-203ENST00000436427 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.15■■□□□ 1.3
YBX1-203ENST00000436427 VSTM4Q8IW00 320 aa23.15■■□□□ 1.3
YBX1-203ENST00000436427 SPC24Q8NBT2 197 aa23.15■■□□□ 1.3
YBX1-203ENST00000436427 SMG8Q8ND04 991 aaKnown RBP23.15■■□□□ 1.3
YBX1-203ENST00000436427 PCMTD1Q96MG8 357 aaPredicted RBP23.15■■□□□ 1.3
YBX1-203ENST00000436427 CGRRF1Q99675 332 aa23.15■■□□□ 1.3
YBX1-203ENST00000436427 IBSPP21815 317 aaPredicted RBP23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms