RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 USP37Q86T82 979 aa28.78■■■□□ 2.2
TMEM248-205ENST00000433271 INTS13Q9NVM9 706 aa28.78■■■□□ 2.2
TMEM248-205ENST00000433271 RBAKQ9NYW8 714 aaPredicted RBP28.78■■■□□ 2.2
TMEM248-205ENST00000433271 PES1O00541 588 aaKnown RBP28.77■■■□□ 2.2
TMEM248-205ENST00000433271 NPTXRO95502 500 aa28.77■■■□□ 2.2
TMEM248-205ENST00000433271 TNFSF9P41273 254 aa28.77■■■□□ 2.2
TMEM248-205ENST00000433271 POU5F1Q01860 360 aaKnown RBP28.77■■■□□ 2.2
TMEM248-205ENST00000433271 TCERG1LQ5VWI1 586 aa28.77■■■□□ 2.2
TMEM248-205ENST00000433271 CEP120Q8N960 986 aa28.77■■■□□ 2.2
TMEM248-205ENST00000433271 PARD3BQ8TEW8 1205 aa28.77■■■□□ 2.2
TMEM248-205ENST00000433271 EIF2AQ9BY44 585 aaKnown RBP28.77■■■□□ 2.2
TMEM248-205ENST00000433271 TMEM39AQ9NV64 488 aa28.77■■■□□ 2.2
TMEM248-205ENST00000433271 CLTAP09496 248 aa28.76■■■□□ 2.2
TMEM248-205ENST00000433271 STAG3L1P0CL83 205 aa28.76■■■□□ 2.2
TMEM248-205ENST00000433271 KCNH2Q12809 1159 aa28.76■■■□□ 2.2
TMEM248-205ENST00000433271 PSMD6Q15008 389 aa28.76■■■□□ 2.2
TMEM248-205ENST00000433271 UBXN11Q5T124 520 aa28.76■■■□□ 2.2
TMEM248-205ENST00000433271 TWF2Q6IBS0 349 aaKnown RBP28.76■■■□□ 2.2
TMEM248-205ENST00000433271 BRSK2Q8IWQ3 736 aa28.76■■■□□ 2.2
TMEM248-205ENST00000433271 TRIM6Q9C030 488 aaPredicted RBP28.76■■■□□ 2.2
TMEM248-205ENST00000433271 UMODL1Q5DID0 1318 aa28.76■■■□□ 2.19
TMEM248-205ENST00000433271 TEX33O43247 280 aa28.76■■■□□ 2.19
TMEM248-205ENST00000433271 PARNO95453 639 aaKnown RBP28.76■■■□□ 2.19
TMEM248-205ENST00000433271 ZSCAN20P17040 1043 aaPredicted RBP28.76■■■□□ 2.19
TMEM248-205ENST00000433271 GRM5P41594 1212 aa28.76■■■□□ 2.19
TMEM248-205ENST00000433271 OSTNP61366 133 aa28.76■■■□□ 2.19
TMEM248-205ENST00000433271 PLEKHO2Q8TD55 490 aa28.76■■■□□ 2.19
TMEM248-205ENST00000433271 CCDC127Q96BQ5 260 aa28.76■■■□□ 2.19
TMEM248-205ENST00000433271 IFIH1Q9BYX4 1025 aaKnown RBP28.76■■■□□ 2.19
TMEM248-205ENST00000433271 AFPP02771 609 aaKnown RBP28.75■■■□□ 2.19
TMEM248-205ENST00000433271 DLG4P78352 724 aa28.75■■■□□ 2.19
TMEM248-205ENST00000433271 UBXN1Q04323 297 aa28.75■■■□□ 2.19
TMEM248-205ENST00000433271 TMX1Q9H3N1 280 aa28.75■■■□□ 2.19
TMEM248-205ENST00000433271 NBNO60934 754 aa28.74■■■□□ 2.19
TMEM248-205ENST00000433271 DSC3Q14574 896 aa28.74■■■□□ 2.19
TMEM248-205ENST00000433271 GPNMBQ14956 572 aa28.74■■■□□ 2.19
TMEM248-205ENST00000433271 ENOX2Q16206 610 aaKnown RBP28.74■■■□□ 2.19
TMEM248-205ENST00000433271 FKBP15Q5T1M5 1219 aa28.74■■■□□ 2.19
TMEM248-205ENST00000433271 FAM43BQ6ZT52 329 aaPredicted RBP28.74■■■□□ 2.19
TMEM248-205ENST00000433271 TMEM192Q8IY95 271 aa28.74■■■□□ 2.19
TMEM248-205ENST00000433271 ACAP3Q96P50 834 aa28.74■■■□□ 2.19
TMEM248-205ENST00000433271 TRAIPQ9BWF2 469 aa28.74■■■□□ 2.19
TMEM248-205ENST00000433271 RPF1Q9H9Y2 349 aaKnown RBP28.74■■■□□ 2.19
TMEM248-205ENST00000433271 RBAK-RBAKDNI3L0D1 243 aa28.73■■■□□ 2.19
TMEM248-205ENST00000433271 TRIM49P0CI25 452 aa28.73■■■□□ 2.19
TMEM248-205ENST00000433271 TRIM49CP0CI26 452 aa28.73■■■□□ 2.19
TMEM248-205ENST00000433271 CLDN10P78369 228 aa28.73■■■□□ 2.19
TMEM248-205ENST00000433271 C1orf220Q5T0J3 134 aa28.73■■■□□ 2.19
TMEM248-205ENST00000433271 CCDC94Q9BW85 323 aaPredicted RBP28.73■■■□□ 2.19
TMEM248-205ENST00000433271 PPP1R12CQ9BZL4 782 aa28.73■■■□□ 2.19
TMEM248-205ENST00000433271 WNT8AQ9H1J5 351 aa28.73■■■□□ 2.19
TMEM248-205ENST00000433271 STX10O60499 249 aa28.72■■■□□ 2.19
TMEM248-205ENST00000433271 SURF1Q15526 300 aa28.72■■■□□ 2.19
TMEM248-205ENST00000433271 FNBP1Q96RU3 617 aa28.72■■■□□ 2.19
TMEM248-205ENST00000433271 PDE11AQ9HCR9 933 aa28.72■■■□□ 2.19
TMEM248-205ENST00000433271 LRRIQ3A6PVS8 624 aaPredicted RBP28.72■■■□□ 2.19
TMEM248-205ENST00000433271 IL18RAPO95256 599 aa28.72■■■□□ 2.19
TMEM248-205ENST00000433271 DLATP10515 647 aaKnown RBP28.72■■■□□ 2.19
TMEM248-205ENST00000433271 CDC25BP30305 580 aa28.72■■■□□ 2.19
TMEM248-205ENST00000433271 CYP2C18P33260 490 aa28.72■■■□□ 2.19
TMEM248-205ENST00000433271 ARHGAP30Q7Z6I6 1101 aaPredicted RBP28.72■■■□□ 2.19
TMEM248-205ENST00000433271 PCDHB2Q9Y5E7 798 aa28.72■■■□□ 2.19
TMEM248-205ENST00000433271 CXCL8P10145 99 aa28.71■■■□□ 2.19
TMEM248-205ENST00000433271 GTF2H1P32780 548 aa28.71■■■□□ 2.19
TMEM248-205ENST00000433271 CCL23P55773 120 aa28.71■■■□□ 2.19
TMEM248-205ENST00000433271 WNT7BP56706 349 aa28.71■■■□□ 2.19
TMEM248-205ENST00000433271 PLEKHG4Q58EX7 1191 aa28.71■■■□□ 2.19
TMEM248-205ENST00000433271 POP1Q99575 1024 aaKnown RBP28.71■■■□□ 2.19
TMEM248-205ENST00000433271 NXF3Q9H4D5 531 aaKnown RBP28.71■■■□□ 2.19
TMEM248-205ENST00000433271 FAM105AQ9NUU6 356 aa28.71■■■□□ 2.19
TMEM248-205ENST00000433271 IPPQ9Y573 584 aa28.71■■■□□ 2.19
TMEM248-205ENST00000433271 TULP1O00294 542 aaPredicted RBP28.7■■■□□ 2.19
TMEM248-205ENST00000433271 KIAA0355O15063 1070 aa28.7■■■□□ 2.19
TMEM248-205ENST00000433271 MGEA5O60502 916 aa28.7■■■□□ 2.19
TMEM248-205ENST00000433271 PBX1P40424 430 aa28.7■■■□□ 2.19
TMEM248-205ENST00000433271 FMO5P49326 533 aa28.7■■■□□ 2.19
TMEM248-205ENST00000433271 PPP3CAQ08209 521 aa28.7■■■□□ 2.19
TMEM248-205ENST00000433271 COL13A1Q5TAT6 717 aaPredicted RBP28.7■■■□□ 2.19
TMEM248-205ENST00000433271 SMG8Q8ND04 991 aaKnown RBP28.7■■■□□ 2.19
TMEM248-205ENST00000433271 SCLYQ96I15 445 aa28.7■■■□□ 2.19
TMEM248-205ENST00000433271 ADAM2Q99965 735 aa28.7■■■□□ 2.19
TMEM248-205ENST00000433271 FTHL17Q9BXU8 183 aa28.7■■■□□ 2.19
TMEM248-205ENST00000433271 SNTG2Q9NY99 539 aa28.7■■■□□ 2.19
TMEM248-205ENST00000433271 HES2Q9Y543 173 aa28.7■■■□□ 2.19
TMEM248-205ENST00000433271 A0A1W2PQC6 194 aa28.69■■■□□ 2.18
TMEM248-205ENST00000433271 SLC10A6Q3KNW5 377 aa28.69■■■□□ 2.18
TMEM248-205ENST00000433271 FAM212AQ96EL1 285 aa28.69■■■□□ 2.18
TMEM248-205ENST00000433271 ERGIC2Q96RQ1 377 aa28.69■■■□□ 2.18
TMEM248-205ENST00000433271 ASB7Q9H672 318 aa28.69■■■□□ 2.18
TMEM248-205ENST00000433271 PLEKHA5Q9HAU0 1116 aa28.69■■■□□ 2.18
TMEM248-205ENST00000433271 TTC26A0AVF1 554 aa28.69■■■□□ 2.18
TMEM248-205ENST00000433271 PMM2O15305 246 aa28.69■■■□□ 2.18
TMEM248-205ENST00000433271 CXCL10P02778 98 aa28.69■■■□□ 2.18
TMEM248-205ENST00000433271 TNNI1P19237 187 aa28.69■■■□□ 2.18
TMEM248-205ENST00000433271 RAB27AP51159 221 aa28.69■■■□□ 2.18
TMEM248-205ENST00000433271 VSTM4Q8IW00 320 aa28.69■■■□□ 2.18
TMEM248-205ENST00000433271 SEPT8Q92599 483 aa28.69■■■□□ 2.18
TMEM248-205ENST00000433271 TANC1Q9C0D5 1861 aa28.68■■■□□ 2.18
TMEM248-205ENST00000433271 A0A0U1RQF3 1178 aa28.68■■■□□ 2.18
TMEM248-205ENST00000433271 GTPBP10A4D1E9 387 aaKnown RBP28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms