RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 ENDOD1O94919 500 aa4.6□□□□□ -1.67
CLK1-204ENST00000432425 ITGB1P05556 798 aa4.6□□□□□ -1.67
CLK1-204ENST00000432425 SNRPA1P09661 255 aaKnown RBP4.6□□□□□ -1.67
CLK1-204ENST00000432425 SPATA31D3P0C874 917 aa4.6□□□□□ -1.67
CLK1-204ENST00000432425 MTNR1BP49286 362 aa4.6□□□□□ -1.67
CLK1-204ENST00000432425 INHBCP55103 352 aa4.6□□□□□ -1.67
CLK1-204ENST00000432425 RNASE9P60153 205 aaKnown RBP4.6□□□□□ -1.67
CLK1-204ENST00000432425 NHLH2Q02577 135 aa4.6□□□□□ -1.67
CLK1-204ENST00000432425 DPTQ07507 201 aa4.6□□□□□ -1.67
CLK1-204ENST00000432425 KLF1Q13351 362 aaPredicted RBP4.6□□□□□ -1.67
CLK1-204ENST00000432425 NOMO1Q15155 1222 aa4.6□□□□□ -1.67
CLK1-204ENST00000432425 TIGD2Q4W5G0 525 aa4.6□□□□□ -1.67
CLK1-204ENST00000432425 KCNV1Q6PIU1 500 aa4.6□□□□□ -1.67
CLK1-204ENST00000432425 SPATA31D4Q6ZUB0 917 aa4.6□□□□□ -1.67
CLK1-204ENST00000432425 GDF7Q7Z4P5 450 aa4.6□□□□□ -1.67
CLK1-204ENST00000432425 NECAB2Q7Z6G3 386 aa4.6□□□□□ -1.67
CLK1-204ENST00000432425 DDX42Q86XP3 938 aaKnown RBP eCLIP4.6□□□□□ -1.67
CLK1-204ENST00000432425 PQLC1Q8N2U9 271 aa4.6□□□□□ -1.67
CLK1-204ENST00000432425 CNTD1Q8N815 330 aa4.6□□□□□ -1.67
CLK1-204ENST00000432425 PROKR1Q8TCW9 393 aa4.6□□□□□ -1.67
CLK1-204ENST00000432425 PRRX2Q99811 253 aa4.6□□□□□ -1.67
CLK1-204ENST00000432425 DMRT3Q9NQL9 472 aa4.6□□□□□ -1.67
CLK1-204ENST00000432425 LANCL2Q9NS86 450 aa4.6□□□□□ -1.67
CLK1-204ENST00000432425 PHLDB1Q86UU1 1377 aa4.59□□□□□ -1.67
CLK1-204ENST00000432425 K7ESF4 209 aa4.59□□□□□ -1.67
CLK1-204ENST00000432425 LEFTY2O00292 366 aa4.59□□□□□ -1.67
CLK1-204ENST00000432425 RNASET2O00584 256 aaKnown RBP4.59□□□□□ -1.67
CLK1-204ENST00000432425 ABHD16AO95870 558 aa4.59□□□□□ -1.67
CLK1-204ENST00000432425 IL2RBP14784 551 aa4.59□□□□□ -1.67
CLK1-204ENST00000432425 LAG3P18627 525 aa4.59□□□□□ -1.67
CLK1-204ENST00000432425 NR4A1P22736 598 aa4.59□□□□□ -1.67
CLK1-204ENST00000432425 MCAMP43121 646 aa4.59□□□□□ -1.67
CLK1-204ENST00000432425 RAP2BP61225 183 aa4.59□□□□□ -1.67
CLK1-204ENST00000432425 SP140Q13342 867 aa4.59□□□□□ -1.67
CLK1-204ENST00000432425 PTPAQ15257 358 aa4.59□□□□□ -1.67
CLK1-204ENST00000432425 RRP12Q5JTH9 1297 aaKnown RBP4.59□□□□□ -1.67
CLK1-204ENST00000432425 ATXN7L2Q5T6C5 722 aaPredicted RBP4.59□□□□□ -1.67
CLK1-204ENST00000432425 LRRC55Q6ZSA7 311 aa4.59□□□□□ -1.67
CLK1-204ENST00000432425 Q6ZVL8 140 aa4.59□□□□□ -1.67
CLK1-204ENST00000432425 ZNF627Q7L945 461 aa4.59□□□□□ -1.67
CLK1-204ENST00000432425 ZNF572Q7Z3I7 529 aaPredicted RBP4.59□□□□□ -1.67
CLK1-204ENST00000432425 MRGPREQ86SM8 312 aa4.59□□□□□ -1.67
CLK1-204ENST00000432425 PLXDC1Q8IUK5 500 aa4.59□□□□□ -1.67
CLK1-204ENST00000432425 FBXO18Q8NFZ0 1043 aa4.59□□□□□ -1.67
CLK1-204ENST00000432425 CHFRQ96EP1 664 aa4.59□□□□□ -1.67
CLK1-204ENST00000432425 SENP6Q9GZR1 1112 aaPredicted RBP4.59□□□□□ -1.67
CLK1-204ENST00000432425 PUS7LQ9H0K6 701 aaKnown RBP4.59□□□□□ -1.67
CLK1-204ENST00000432425 ZNF768Q9H5H4 540 aaKnown RBP4.59□□□□□ -1.67
CLK1-204ENST00000432425 SLITRK6Q9H5Y7 841 aa4.59□□□□□ -1.67
CLK1-204ENST00000432425 MOCS1Q9NZB8 636 aa4.59□□□□□ -1.67
CLK1-204ENST00000432425 DNM3Q9UQ16 869 aa4.59□□□□□ -1.67
CLK1-204ENST00000432425 ATP8A1Q9Y2Q0 1164 aa4.59□□□□□ -1.67
CLK1-204ENST00000432425 PCDHGA2Q9Y5H1 932 aa4.59□□□□□ -1.67
CLK1-204ENST00000432425 GPR45Q9Y5Y3 372 aa4.59□□□□□ -1.67
CLK1-204ENST00000432425 A0A087X1B8 175 aa4.58□□□□□ -1.68
CLK1-204ENST00000432425 TMEM191CA6NGB0 347 aa4.58□□□□□ -1.68
CLK1-204ENST00000432425 FAM171A2A8MVW0 826 aa4.58□□□□□ -1.68
CLK1-204ENST00000432425 CXorf49A8MYA2 514 aaPredicted RBP4.58□□□□□ -1.68
CLK1-204ENST00000432425 AHRRA9YTQ3 701 aa4.58□□□□□ -1.68
CLK1-204ENST00000432425 RAP2AP10114 183 aa4.58□□□□□ -1.68
CLK1-204ENST00000432425 GSPT1P15170 499 aaKnown RBP4.58□□□□□ -1.68
CLK1-204ENST00000432425 SREBF1P36956 1147 aa4.58□□□□□ -1.68
CLK1-204ENST00000432425 CLRN1P58418 232 aa4.58□□□□□ -1.68
CLK1-204ENST00000432425 PPP3CAQ08209 521 aa4.58□□□□□ -1.68
CLK1-204ENST00000432425 CLUL1Q15846 466 aa4.58□□□□□ -1.68
CLK1-204ENST00000432425 MRGPRGQ86SM5 289 aa4.58□□□□□ -1.68
CLK1-204ENST00000432425 SYT12Q8IV01 421 aa4.58□□□□□ -1.68
CLK1-204ENST00000432425 SLC35B2Q8TB61 432 aa4.58□□□□□ -1.68
CLK1-204ENST00000432425 MENTQ9BUN1 341 aa4.58□□□□□ -1.68
CLK1-204ENST00000432425 SBNO2Q9Y2G9 1366 aa4.58□□□□□ -1.68
CLK1-204ENST00000432425 SUV39H1O43463 412 aa4.57□□□□□ -1.68
CLK1-204ENST00000432425 RAMP2O60895 175 aa4.57□□□□□ -1.68
CLK1-204ENST00000432425 ZSCAN20P17040 1043 aaPredicted RBP4.57□□□□□ -1.68
CLK1-204ENST00000432425 AGXTP21549 392 aa4.57□□□□□ -1.68
CLK1-204ENST00000432425 MGAT2Q10469 447 aa4.57□□□□□ -1.68
CLK1-204ENST00000432425 CSRP2Q16527 193 aa4.57□□□□□ -1.68
CLK1-204ENST00000432425 RHOUQ7L0Q8 258 aa4.57□□□□□ -1.68
CLK1-204ENST00000432425 LDLRAD3Q86YD5 345 aa4.57□□□□□ -1.68
CLK1-204ENST00000432425 DRC7Q8IY82 874 aa4.57□□□□□ -1.68
CLK1-204ENST00000432425 ULK2Q8IYT8 1036 aa4.57□□□□□ -1.68
CLK1-204ENST00000432425 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.57□□□□□ -1.68
CLK1-204ENST00000432425 SSH1Q8WYL5 1049 aa4.57□□□□□ -1.68
CLK1-204ENST00000432425 HOXB13Q92826 284 aaPredicted RBP4.57□□□□□ -1.68
CLK1-204ENST00000432425 PHACTR3Q96KR7 559 aa4.57□□□□□ -1.68
CLK1-204ENST00000432425 LDAHQ9H6V9 325 aa4.57□□□□□ -1.68
CLK1-204ENST00000432425 AKIP1Q9NQ31 210 aa4.57□□□□□ -1.68
CLK1-204ENST00000432425 TMEM140Q9NV12 185 aa4.57□□□□□ -1.68
CLK1-204ENST00000432425 CHST2Q9Y4C5 530 aa4.57□□□□□ -1.68
CLK1-204ENST00000432425 GAGE12BA1L429 117 aa4.57□□□□□ -1.68
CLK1-204ENST00000432425 GAGE12HA6NDE8 117 aa4.57□□□□□ -1.68
CLK1-204ENST00000432425 TEX33O43247 280 aa4.57□□□□□ -1.68
CLK1-204ENST00000432425 NCR1O76036 304 aa4.57□□□□□ -1.68
CLK1-204ENST00000432425 ALOX15P16050 662 aaPredicted RBP4.57□□□□□ -1.68
CLK1-204ENST00000432425 ATP5JP18859 108 aa4.57□□□□□ -1.68
CLK1-204ENST00000432425 PTTG1IPP53801 180 aa4.57□□□□□ -1.68
CLK1-204ENST00000432425 FAM189BP81408 668 aa4.57□□□□□ -1.68
CLK1-204ENST00000432425 MXRA7P84157 204 aa4.57□□□□□ -1.68
CLK1-204ENST00000432425 PURAQ00577 322 aaKnown RBP4.57□□□□□ -1.68
CLK1-204ENST00000432425 AFMIDQ63HM1 303 aa4.57□□□□□ -1.68
CLK1-204ENST00000432425 PGM2L1Q6PCE3 622 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms