RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 NAMPTP43490 491 aa13.84□□□□□ -0.19
DDX56-204ENST00000431640 HADHBP55084 474 aaKnown RBP13.84□□□□□ -0.19
DDX56-204ENST00000431640 SP2Q02086 613 aa13.84□□□□□ -0.19
DDX56-204ENST00000431640 CYP24A1Q07973 514 aa13.84□□□□□ -0.19
DDX56-204ENST00000431640 CCL14Q16627 93 aa13.84□□□□□ -0.19
DDX56-204ENST00000431640 MTERF2Q49AM1 385 aa13.84□□□□□ -0.19
DDX56-204ENST00000431640 TMEM63BQ5T3F8 832 aa13.84□□□□□ -0.19
DDX56-204ENST00000431640 SEPT14Q6ZU15 432 aa13.84□□□□□ -0.19
DDX56-204ENST00000431640 ENOSF1Q7L5Y1 443 aa13.84□□□□□ -0.19
DDX56-204ENST00000431640 DAAM2Q86T65 1068 aa13.84□□□□□ -0.19
DDX56-204ENST00000431640 CBWD2Q8IUF1 395 aa13.84□□□□□ -0.19
DDX56-204ENST00000431640 ARHGEF19Q8IW93 802 aa13.84□□□□□ -0.19
DDX56-204ENST00000431640 EXOC8Q8IYI6 725 aa13.84□□□□□ -0.19
DDX56-204ENST00000431640 FAM71AQ8IYT1 594 aa13.84□□□□□ -0.19
DDX56-204ENST00000431640 USP38Q8NB14 1042 aa13.84□□□□□ -0.19
DDX56-204ENST00000431640 FBXL13Q8NEE6 735 aa13.84□□□□□ -0.19
DDX56-204ENST00000431640 SLC35G2Q8TBE7 412 aa13.84□□□□□ -0.19
DDX56-204ENST00000431640 PLEKHO2Q8TD55 490 aa13.84□□□□□ -0.19
DDX56-204ENST00000431640 MORC4Q8TE76 937 aa13.84□□□□□ -0.19
DDX56-204ENST00000431640 BICD1Q96G01 975 aa13.84□□□□□ -0.19
DDX56-204ENST00000431640 NT5C1BQ96P26 610 aa13.84□□□□□ -0.19
DDX56-204ENST00000431640 ISCUQ9H1K1 167 aa13.84□□□□□ -0.19
DDX56-204ENST00000431640 RNF216Q9NWF9 866 aaPredicted RBP13.84□□□□□ -0.19
DDX56-204ENST00000431640 GABRQQ9UN88 632 aa13.84□□□□□ -0.19
DDX56-204ENST00000431640 STXBP5LQ9Y2K9 1186 aa13.84□□□□□ -0.19
DDX56-204ENST00000431640 TELO2Q9Y4R8 837 aa13.84□□□□□ -0.19
DDX56-204ENST00000431640 SYNGAP1Q96PV0 1343 aa13.84□□□□□ -0.19
DDX56-204ENST00000431640 ARID2Q68CP9 1835 aa13.84□□□□□ -0.19
DDX56-204ENST00000431640 HNRNPDLO14979 420 aaKnown RBP13.83□□□□□ -0.19
DDX56-204ENST00000431640 EXTL3O43909 919 aa13.83□□□□□ -0.19
DDX56-204ENST00000431640 RTN2O75298 545 aa13.83□□□□□ -0.19
DDX56-204ENST00000431640 IGHA2P01877 340 aa13.83□□□□□ -0.19
DDX56-204ENST00000431640 LIG4P49917 911 aa13.83□□□□□ -0.19
DDX56-204ENST00000431640 SP4Q02446 784 aa13.83□□□□□ -0.19
DDX56-204ENST00000431640 MAP2K1Q02750 393 aaPredicted RBP13.83□□□□□ -0.19
DDX56-204ENST00000431640 EMC2Q15006 297 aa13.83□□□□□ -0.19
DDX56-204ENST00000431640 SLC7A3Q8WY07 619 aa13.83□□□□□ -0.19
DDX56-204ENST00000431640 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.83□□□□□ -0.19
DDX56-204ENST00000431640 CCDC127Q96BQ5 260 aa13.83□□□□□ -0.19
DDX56-204ENST00000431640 MS4A14Q96JA4 679 aa13.83□□□□□ -0.19
DDX56-204ENST00000431640 MAML3Q96JK9 1138 aa13.83□□□□□ -0.19
DDX56-204ENST00000431640 KATNBL1Q9H079 304 aa13.83□□□□□ -0.19
DDX56-204ENST00000431640 DHX33Q9H6R0 707 aaKnown RBP13.83□□□□□ -0.19
DDX56-204ENST00000431640 PDE11AQ9HCR9 933 aa13.83□□□□□ -0.19
DDX56-204ENST00000431640 PRDM10Q9NQV6 1147 aa13.83□□□□□ -0.19
DDX56-204ENST00000431640 RBM12Q9NTZ6 932 aaKnown RBP13.83□□□□□ -0.19
DDX56-204ENST00000431640 SEPT11Q9NVA2 429 aaKnown RBP13.83□□□□□ -0.19
DDX56-204ENST00000431640 RAB20Q9NX57 234 aa13.83□□□□□ -0.19
DDX56-204ENST00000431640 STYXL1Q9Y6J8 313 aa13.83□□□□□ -0.19
DDX56-204ENST00000431640 IVNS1ABPQ9Y6Y0 642 aa13.83□□□□□ -0.19
DDX56-204ENST00000431640 MYH9P35579 1960 aaKnown RBP13.83□□□□□ -0.2
DDX56-204ENST00000431640 LRRIQ3A6PVS8 624 aaPredicted RBP13.83□□□□□ -0.2
DDX56-204ENST00000431640 TMCO5BA8MYB1 307 aa13.83□□□□□ -0.2
DDX56-204ENST00000431640 CCDC188H7C350 402 aa13.83□□□□□ -0.2
DDX56-204ENST00000431640 TNPO2O14787 897 aaKnown RBP13.83□□□□□ -0.2
DDX56-204ENST00000431640 STRNO43815 780 aa13.83□□□□□ -0.2
DDX56-204ENST00000431640 LRRN2O75325 713 aa13.83□□□□□ -0.2
DDX56-204ENST00000431640 CLSTN1O94985 981 aa13.83□□□□□ -0.2
DDX56-204ENST00000431640 ARIH2O95376 493 aa13.83□□□□□ -0.2
DDX56-204ENST00000431640 ARL2P36404 184 aa13.83□□□□□ -0.2
DDX56-204ENST00000431640 PSMC4P43686 418 aa13.83□□□□□ -0.2
DDX56-204ENST00000431640 TNNT3P45378 269 aaPredicted RBP13.83□□□□□ -0.2
DDX56-204ENST00000431640 EPHB4P54760 987 aa13.83□□□□□ -0.2
DDX56-204ENST00000431640 GPC5P78333 572 aa13.83□□□□□ -0.2
DDX56-204ENST00000431640 MAP2K5Q13163 448 aa13.83□□□□□ -0.2
DDX56-204ENST00000431640 EMBQ6PCB8 327 aa13.83□□□□□ -0.2
DDX56-204ENST00000431640 ARMCX2Q7L311 632 aa13.83□□□□□ -0.2
DDX56-204ENST00000431640 EEPD1Q7L9B9 569 aa13.83□□□□□ -0.2
DDX56-204ENST00000431640 NT5DC3Q86UY8 548 aa13.83□□□□□ -0.2
DDX56-204ENST00000431640 FBXO16Q8IX29 292 aaPredicted RBP13.83□□□□□ -0.2
DDX56-204ENST00000431640 RASGEF1CQ8N431 466 aa13.83□□□□□ -0.2
DDX56-204ENST00000431640 OLIG1Q8TAK6 271 aa13.83□□□□□ -0.2
DDX56-204ENST00000431640 DEPTORQ8TB45 409 aa13.83□□□□□ -0.2
DDX56-204ENST00000431640 FAM71BQ8TC56 605 aa13.83□□□□□ -0.2
DDX56-204ENST00000431640 CD99L2Q8TCZ2 262 aa13.83□□□□□ -0.2
DDX56-204ENST00000431640 AFAP1L1Q8TED9 768 aa13.83□□□□□ -0.2
DDX56-204ENST00000431640 AENQ8WTP8 325 aaKnown RBP13.83□□□□□ -0.2
DDX56-204ENST00000431640 SEPT1Q8WYJ6 367 aa13.83□□□□□ -0.2
DDX56-204ENST00000431640 SHC3Q92529 594 aa13.83□□□□□ -0.2
DDX56-204ENST00000431640 SAAL1Q96ER3 474 aa13.83□□□□□ -0.2
DDX56-204ENST00000431640 HES6Q96HZ4 224 aa13.83□□□□□ -0.2
DDX56-204ENST00000431640 KIFC3Q9BVG8 833 aa13.83□□□□□ -0.2
DDX56-204ENST00000431640 TMEM134Q9H6X4 195 aa13.83□□□□□ -0.2
DDX56-204ENST00000431640 TMEM59LQ9UK28 342 aa13.83□□□□□ -0.2
DDX56-204ENST00000431640 CASP8AP2Q9UKL3 1982 aa13.82□□□□□ -0.2
DDX56-204ENST00000431640 LOC102724159A0A0B4J2E5 919 aa13.82□□□□□ -0.2
DDX56-204ENST00000431640 K7ERI5 159 aa13.82□□□□□ -0.2
DDX56-204ENST00000431640 GPR25O00155 361 aa13.82□□□□□ -0.2
DDX56-204ENST00000431640 PGRMC1O00264 195 aaKnown RBP13.82□□□□□ -0.2
DDX56-204ENST00000431640 POLR3GO15318 223 aaPredicted RBP13.82□□□□□ -0.2
DDX56-204ENST00000431640 CEP104O60308 925 aa13.82□□□□□ -0.2
DDX56-204ENST00000431640 SNAI1O95863 264 aaPredicted RBP13.82□□□□□ -0.2
DDX56-204ENST00000431640 PIGRP01833 764 aa13.82□□□□□ -0.2
DDX56-204ENST00000431640 HOXC6P09630 235 aa13.82□□□□□ -0.2
DDX56-204ENST00000431640 ATP4AP20648 1035 aa13.82□□□□□ -0.2
DDX56-204ENST00000431640 AARSP49588 968 aaKnown RBP eCLIP13.82□□□□□ -0.2
DDX56-204ENST00000431640 CLDN10P78369 228 aa13.82□□□□□ -0.2
DDX56-204ENST00000431640 SP3Q02447 781 aa13.82□□□□□ -0.2
DDX56-204ENST00000431640 PRKCZQ05513 592 aa13.82□□□□□ -0.2
DDX56-204ENST00000431640 NNTQ13423 1086 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms