RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 COLGALT1Q8NBJ5 622 aa9.61□□□□□ -0.87
HDAC1-202ENST00000428704 SPATA20Q8TB22 786 aa9.61□□□□□ -0.87
HDAC1-202ENST00000428704 TRAPPC12Q8WVT3 735 aa9.61□□□□□ -0.87
HDAC1-202ENST00000428704 BORCS6Q96GS4 357 aa9.61□□□□□ -0.87
HDAC1-202ENST00000428704 CCDC34Q96HJ3 373 aa9.61□□□□□ -0.87
HDAC1-202ENST00000428704 MBOAT7Q96N66 472 aa9.61□□□□□ -0.87
HDAC1-202ENST00000428704 CLIC6Q96NY7 704 aa9.61□□□□□ -0.87
HDAC1-202ENST00000428704 ZNF577Q9BSK1 485 aa9.61□□□□□ -0.87
HDAC1-202ENST00000428704 FTHL17Q9BXU8 183 aa9.61□□□□□ -0.87
HDAC1-202ENST00000428704 NGRNQ9NPE2 291 aaKnown RBP9.61□□□□□ -0.87
HDAC1-202ENST00000428704 WNT16Q9UBV4 365 aa9.61□□□□□ -0.87
HDAC1-202ENST00000428704 CA14Q9ULX7 337 aa9.61□□□□□ -0.87
HDAC1-202ENST00000428704 SMG5Q9UPR3 1016 aaKnown RBP9.61□□□□□ -0.87
HDAC1-202ENST00000428704 LZTS1Q9Y250 596 aa9.61□□□□□ -0.87
HDAC1-202ENST00000428704 IGSF9BQ9UPX0 1349 aa9.6□□□□□ -0.87
HDAC1-202ENST00000428704 CYP3A7-CYP3A51PA0A087WV96 503 aa9.6□□□□□ -0.87
HDAC1-202ENST00000428704 KRBA1A5PL33 1030 aa9.6□□□□□ -0.87
HDAC1-202ENST00000428704 ZBTB42B2RXF5 422 aa9.6□□□□□ -0.87
HDAC1-202ENST00000428704 MSH4O15457 936 aa9.6□□□□□ -0.87
HDAC1-202ENST00000428704 NARSO43776 548 aaKnown RBP9.6□□□□□ -0.87
HDAC1-202ENST00000428704 ATP4AP20648 1035 aa9.6□□□□□ -0.87
HDAC1-202ENST00000428704 CYP3A7P24462 503 aa9.6□□□□□ -0.87
HDAC1-202ENST00000428704 CA8P35219 290 aa9.6□□□□□ -0.87
HDAC1-202ENST00000428704 USP11P51784 963 aa9.6□□□□□ -0.87
HDAC1-202ENST00000428704 ORC2Q13416 577 aaPredicted RBP9.6□□□□□ -0.87
HDAC1-202ENST00000428704 DHX8Q14562 1220 aaKnown RBP9.6□□□□□ -0.87
HDAC1-202ENST00000428704 ZRSR1Q15695 479 aaKnown RBP9.6□□□□□ -0.87
HDAC1-202ENST00000428704 TTC38Q5R3I4 469 aa9.6□□□□□ -0.87
HDAC1-202ENST00000428704 ZNF746Q6NUN9 644 aaPredicted RBP9.6□□□□□ -0.87
HDAC1-202ENST00000428704 TAF2Q6P1X5 1199 aa9.6□□□□□ -0.87
HDAC1-202ENST00000428704 OTOP3Q7RTS5 596 aa9.6□□□□□ -0.87
HDAC1-202ENST00000428704 PLPPR4Q7Z2D5 763 aa9.6□□□□□ -0.87
HDAC1-202ENST00000428704 RTN4RL1Q86UN2 441 aaPredicted RBP9.6□□□□□ -0.87
HDAC1-202ENST00000428704 C12orf76Q8N812 135 aaPredicted RBP9.6□□□□□ -0.87
HDAC1-202ENST00000428704 CNNM3Q8NE01 707 aa9.6□□□□□ -0.87
HDAC1-202ENST00000428704 NETO1Q8TDF5 533 aa9.6□□□□□ -0.87
HDAC1-202ENST00000428704 ATRIPQ8WXE1 791 aa9.6□□□□□ -0.87
HDAC1-202ENST00000428704 SLC5A5Q92911 643 aa9.6□□□□□ -0.87
HDAC1-202ENST00000428704 GJA10Q969M2 543 aa9.6□□□□□ -0.87
HDAC1-202ENST00000428704 MTRQ99707 1265 aa9.6□□□□□ -0.87
HDAC1-202ENST00000428704 TRIM5Q9C035 493 aa9.6□□□□□ -0.87
HDAC1-202ENST00000428704 KCNK12Q9HB15 430 aa9.6□□□□□ -0.87
HDAC1-202ENST00000428704 TBC1D22BQ9NU19 505 aa9.6□□□□□ -0.87
HDAC1-202ENST00000428704 SIT1Q9Y3P8 196 aa9.6□□□□□ -0.87
HDAC1-202ENST00000428704 CDY2AQ9Y6F7 541 aa9.6□□□□□ -0.87
HDAC1-202ENST00000428704 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.6□□□□□ -0.87
HDAC1-202ENST00000428704 KIAA1671Q9BY89 1806 aa9.59□□□□□ -0.87
HDAC1-202ENST00000428704 TBKBP1A7MCY6 615 aa9.59□□□□□ -0.87
HDAC1-202ENST00000428704 LAD1O00515 517 aa9.59□□□□□ -0.87
HDAC1-202ENST00000428704 SLC37A4O43826 429 aa9.59□□□□□ -0.87
HDAC1-202ENST00000428704 NEMFO60524 1076 aa9.59□□□□□ -0.87
HDAC1-202ENST00000428704 PROS1P07225 676 aa9.59□□□□□ -0.87
HDAC1-202ENST00000428704 STAT5BP51692 787 aa9.59□□□□□ -0.87
HDAC1-202ENST00000428704 TPM4P67936 248 aa9.59□□□□□ -0.87
HDAC1-202ENST00000428704 IGBP1P78318 339 aa9.59□□□□□ -0.87
HDAC1-202ENST00000428704 NCAPHQ15003 741 aa9.59□□□□□ -0.87
HDAC1-202ENST00000428704 INF2Q27J81 1249 aa9.59□□□□□ -0.87
HDAC1-202ENST00000428704 Q4G0T1 1027 aa9.59□□□□□ -0.87
HDAC1-202ENST00000428704 EARS2Q5JPH6 523 aaKnown RBP9.59□□□□□ -0.87
HDAC1-202ENST00000428704 B3GNT9Q6UX72 402 aa9.59□□□□□ -0.87
HDAC1-202ENST00000428704 CCDC149Q6ZUS6 474 aa9.59□□□□□ -0.87
HDAC1-202ENST00000428704 KRT25Q7Z3Z0 450 aa9.59□□□□□ -0.87
HDAC1-202ENST00000428704 C4orf32Q8N8J7 132 aa9.59□□□□□ -0.87
HDAC1-202ENST00000428704 ETNPPLQ8TBG4 499 aa9.59□□□□□ -0.87
HDAC1-202ENST00000428704 SPIRE2Q8WWL2 714 aa9.59□□□□□ -0.87
HDAC1-202ENST00000428704 CSRNP2Q9H175 543 aa9.59□□□□□ -0.87
HDAC1-202ENST00000428704 AZI2Q9H6S1 392 aa9.59□□□□□ -0.87
HDAC1-202ENST00000428704 AGO3Q9H9G7 860 aaKnown RBP9.59□□□□□ -0.87
HDAC1-202ENST00000428704 IL21Q9HBE4 155 aa9.59□□□□□ -0.87
HDAC1-202ENST00000428704 ZNF302Q9NR11 478 aa9.59□□□□□ -0.87
HDAC1-202ENST00000428704 DZANK1Q9NVP4 752 aa9.59□□□□□ -0.87
HDAC1-202ENST00000428704 DLGAP2Q9P1A6 1054 aa9.59□□□□□ -0.87
HDAC1-202ENST00000428704 GMEB2Q9UKD1 530 aa9.59□□□□□ -0.87
HDAC1-202ENST00000428704 PCDHA5Q9Y5H7 936 aa9.59□□□□□ -0.87
HDAC1-202ENST00000428704 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.58□□□□□ -0.88
HDAC1-202ENST00000428704 RRN3P2A6NIE6 340 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 SLC30A4O14863 429 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 LAMTOR5O43504 91 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 ZNF862O60290 1169 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 PSMD10O75832 226 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 SLFN14P0C7P3 912 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 LAG3P18627 525 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 PRPHP41219 470 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 SLC26A2P50443 739 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 COPS2P61201 443 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 KRT76Q01546 638 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 PLCB3Q01970 1234 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 KRT17Q04695 432 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 GRIN1Q05586 938 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 SMC1AQ14683 1233 aaKnown RBP9.58□□□□□ -0.88
HDAC1-202ENST00000428704 NONOQ15233 471 aaKnown RBP eCLIP9.58□□□□□ -0.88
HDAC1-202ENST00000428704 UGCGQ16739 394 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 ZNF528Q3MIS6 628 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 DPCR1Q3MIW9 517 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 FAM160B1Q5W0V3 765 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 SWSAP1Q6NVH7 229 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 MIS18BP1Q6P0N0 1132 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 PDXDC2PQ6P474 469 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 BLOC1S3Q6QNY0 202 aa9.58□□□□□ -0.88
HDAC1-202ENST00000428704 MOXD1Q6UVY6 613 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms