RNA–Protein interactions for RNA: ENST00000428482.5

HDLBP-216, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 1,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-216ENST00000428482 C3orf58Q8NDZ4 430 aa11.25□□□□□ -0.61
HDLBP-216ENST00000428482 LARP4BQ92615 738 aaKnown RBP11.25□□□□□ -0.61
HDLBP-216ENST00000428482 STAMQ92783 540 aa11.25□□□□□ -0.61
HDLBP-216ENST00000428482 PGBD4Q96DM1 585 aa11.25□□□□□ -0.61
HDLBP-216ENST00000428482 TMEM169Q96HH4 297 aa11.25□□□□□ -0.61
HDLBP-216ENST00000428482 AK8Q96MA6 479 aa11.25□□□□□ -0.61
HDLBP-216ENST00000428482 DRC1Q96MC2 740 aa11.25□□□□□ -0.61
HDLBP-216ENST00000428482 HERC2P3Q9BVR0 1158 aa11.25□□□□□ -0.61
HDLBP-216ENST00000428482 AAASQ9NRG9 546 aa11.25□□□□□ -0.61
HDLBP-216ENST00000428482 TFIP11Q9UBB9 837 aaKnown RBP11.25□□□□□ -0.61
HDLBP-216ENST00000428482 MTCL1Q9Y4B5 1905 aaKnown RBP11.25□□□□□ -0.61
HDLBP-216ENST00000428482 COL4A3Q01955 1670 aa11.24□□□□□ -0.61
HDLBP-216ENST00000428482 MYMKA6NI61 221 aa11.24□□□□□ -0.61
HDLBP-216ENST00000428482 BMP15O95972 392 aa11.24□□□□□ -0.61
HDLBP-216ENST00000428482 SKIP12755 728 aa11.24□□□□□ -0.61
HDLBP-216ENST00000428482 PLS3P13797 630 aa11.24□□□□□ -0.61
HDLBP-216ENST00000428482 PTMSP20962 102 aa11.24□□□□□ -0.61
HDLBP-216ENST00000428482 PROZP22891 400 aa11.24□□□□□ -0.61
HDLBP-216ENST00000428482 CASP1P29466 404 aa11.24□□□□□ -0.61
HDLBP-216ENST00000428482 TNFSF9P41273 254 aa11.24□□□□□ -0.61
HDLBP-216ENST00000428482 CASP5P51878 434 aa11.24□□□□□ -0.61
HDLBP-216ENST00000428482 ZNF131P52739 623 aa11.24□□□□□ -0.61
HDLBP-216ENST00000428482 UBE3AQ05086 875 aa11.24□□□□□ -0.61
HDLBP-216ENST00000428482 GRIK3Q13003 919 aa11.24□□□□□ -0.61
HDLBP-216ENST00000428482 KCNC3Q14003 757 aa11.24□□□□□ -0.61
HDLBP-216ENST00000428482 GIT2Q14161 759 aa11.24□□□□□ -0.61
HDLBP-216ENST00000428482 PPP2R5AQ15172 486 aa11.24□□□□□ -0.61
HDLBP-216ENST00000428482 DCAF4L1Q3SXM0 396 aa11.24□□□□□ -0.61
HDLBP-216ENST00000428482 DYMQ7RTS9 669 aa11.24□□□□□ -0.61
HDLBP-216ENST00000428482 EFHBQ8N7U6 833 aa11.24□□□□□ -0.61
HDLBP-216ENST00000428482 PDILTQ8N807 584 aa11.24□□□□□ -0.61
HDLBP-216ENST00000428482 SMRP1Q8NCR6 262 aa11.24□□□□□ -0.61
HDLBP-216ENST00000428482 GLIS3Q8NEA6 775 aa11.24□□□□□ -0.61
HDLBP-216ENST00000428482 MICAL1Q8TDZ2 1067 aa11.24□□□□□ -0.61
HDLBP-216ENST00000428482 CALML4Q96GE6 196 aa11.24□□□□□ -0.61
HDLBP-216ENST00000428482 SNX27Q96L92 541 aa11.24□□□□□ -0.61
HDLBP-216ENST00000428482 ZMAT2Q96NC0 199 aaKnown RBP11.24□□□□□ -0.61
HDLBP-216ENST00000428482 GBP4Q96PP9 640 aa11.24□□□□□ -0.61
HDLBP-216ENST00000428482 RPS6KC1Q96S38 1066 aa11.24□□□□□ -0.61
HDLBP-216ENST00000428482 ACO2Q99798 780 aaKnown RBP11.24□□□□□ -0.61
HDLBP-216ENST00000428482 NT5C3AQ9H0P0 336 aa11.24□□□□□ -0.61
HDLBP-216ENST00000428482 PTPRHQ9HD43 1115 aa11.24□□□□□ -0.61
HDLBP-216ENST00000428482 TUBGCP4Q9UGJ1 667 aa11.24□□□□□ -0.61
HDLBP-216ENST00000428482 SRPRBQ9Y5M8 271 aaKnown RBP11.24□□□□□ -0.61
HDLBP-216ENST00000428482 HCFC2Q9Y5Z7 792 aa11.24□□□□□ -0.61
HDLBP-216ENST00000428482 SCN1AP35498 2009 aa11.24□□□□□ -0.61
HDLBP-216ENST00000428482 DOCK8Q8NF50 2099 aa11.24□□□□□ -0.61
HDLBP-216ENST00000428482 I3L4J1 428 aa11.23□□□□□ -0.61
HDLBP-216ENST00000428482 CLASP2O75122 1294 aaKnown RBP11.23□□□□□ -0.61
HDLBP-216ENST00000428482 EFEMP2O95967 443 aa11.23□□□□□ -0.61
HDLBP-216ENST00000428482 CXCL8P10145 99 aa11.23□□□□□ -0.61
HDLBP-216ENST00000428482 RPL17P18621 184 aaKnown RBP11.23□□□□□ -0.61
HDLBP-216ENST00000428482 GUCY2FP51841 1108 aa11.23□□□□□ -0.61
HDLBP-216ENST00000428482 DNM1Q05193 864 aaKnown RBP11.23□□□□□ -0.61
HDLBP-216ENST00000428482 ZP2Q05996 745 aa11.23□□□□□ -0.61
HDLBP-216ENST00000428482 SPAG1Q07617 926 aa11.23□□□□□ -0.61
HDLBP-216ENST00000428482 ADAM15Q13444 863 aa11.23□□□□□ -0.61
HDLBP-216ENST00000428482 SMAD4Q13485 552 aaKnown RBP11.23□□□□□ -0.61
HDLBP-216ENST00000428482 SMC1AQ14683 1233 aaKnown RBP11.23□□□□□ -0.61
HDLBP-216ENST00000428482 NOLC1Q14978 699 aaKnown RBP eCLIP11.23□□□□□ -0.61
HDLBP-216ENST00000428482 STK38Q15208 465 aa11.23□□□□□ -0.61
HDLBP-216ENST00000428482 ZC2HC1CQ53FD0 456 aaPredicted RBP11.23□□□□□ -0.61
HDLBP-216ENST00000428482 SYCE2Q6PIF2 218 aa11.23□□□□□ -0.61
HDLBP-216ENST00000428482 SHC4Q6S5L8 630 aa11.23□□□□□ -0.61
HDLBP-216ENST00000428482 TMC7Q7Z402 723 aa11.23□□□□□ -0.61
HDLBP-216ENST00000428482 GLYCTKQ8IVS8 523 aa11.23□□□□□ -0.61
HDLBP-216ENST00000428482 C12orf76Q8N812 135 aaPredicted RBP11.23□□□□□ -0.61
HDLBP-216ENST00000428482 ZSWIM2Q8NEG5 633 aa11.23□□□□□ -0.61
HDLBP-216ENST00000428482 HPS3Q969F9 1004 aa11.23□□□□□ -0.61
HDLBP-216ENST00000428482 C18orf25Q96B23 403 aaPredicted RBP11.23□□□□□ -0.61
HDLBP-216ENST00000428482 MRPL4Q9BYD3 311 aaKnown RBP11.23□□□□□ -0.61
HDLBP-216ENST00000428482 PANK2Q9BZ23 570 aa11.23□□□□□ -0.61
HDLBP-216ENST00000428482 GPR62Q9BZJ7 368 aa11.23□□□□□ -0.61
HDLBP-216ENST00000428482 CCSER1Q9C0I3 900 aa11.23□□□□□ -0.61
HDLBP-216ENST00000428482 ZHX3Q9H4I2 956 aa11.23□□□□□ -0.61
HDLBP-216ENST00000428482 TLE6Q9H808 572 aa11.23□□□□□ -0.61
HDLBP-216ENST00000428482 TBC1D7Q9P0N9 293 aa11.23□□□□□ -0.61
HDLBP-216ENST00000428482 CD207Q9UJ71 328 aa11.23□□□□□ -0.61
HDLBP-216ENST00000428482 LZTS1Q9Y250 596 aa11.23□□□□□ -0.61
HDLBP-216ENST00000428482 GIT1Q9Y2X7 761 aa11.23□□□□□ -0.61
HDLBP-216ENST00000428482 USP15Q9Y4E8 981 aaPredicted RBP11.23□□□□□ -0.61
HDLBP-216ENST00000428482 ZMYM2Q9UBW7 1377 aa11.23□□□□□ -0.61
HDLBP-216ENST00000428482 KMT2EQ8IZD2 1858 aa11.23□□□□□ -0.61
HDLBP-216ENST00000428482 FAM86C2PA6NEL3 165 aa11.22□□□□□ -0.61
HDLBP-216ENST00000428482 FAM189A1O60320 539 aa11.22□□□□□ -0.61
HDLBP-216ENST00000428482 TBCAO75347 108 aaKnown RBP11.22□□□□□ -0.61
HDLBP-216ENST00000428482 FAM13AO94988 1023 aa11.22□□□□□ -0.61
HDLBP-216ENST00000428482 CTSAP10619 480 aa11.22□□□□□ -0.61
HDLBP-216ENST00000428482 MCM4P33991 863 aa11.22□□□□□ -0.61
HDLBP-216ENST00000428482 ALDH7A1P49419 539 aaKnown RBP11.22□□□□□ -0.61
HDLBP-216ENST00000428482 WNT7BP56706 349 aa11.22□□□□□ -0.61
HDLBP-216ENST00000428482 KCNA1Q09470 495 aa11.22□□□□□ -0.61
HDLBP-216ENST00000428482 SLC39A14Q15043 492 aa11.22□□□□□ -0.61
HDLBP-216ENST00000428482 PCBP1Q15365 356 aaKnown RBP eCLIP11.22□□□□□ -0.61
HDLBP-216ENST00000428482 E2F4Q16254 413 aa11.22□□□□□ -0.61
HDLBP-216ENST00000428482 CSPP1Q1MSJ5 1256 aa11.22□□□□□ -0.61
HDLBP-216ENST00000428482 RTP2Q5QGT7 225 aa11.22□□□□□ -0.61
HDLBP-216ENST00000428482 AXDND1Q5T1B0 1012 aaPredicted RBP11.22□□□□□ -0.61
HDLBP-216ENST00000428482 FUT10Q6P4F1 479 aa11.22□□□□□ -0.61
HDLBP-216ENST00000428482 PRSS55Q6UWB4 352 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms