RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 ALKBH5Q6P6C2 394 aaKnown RBP10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 TRIM59Q8IWR1 403 aa10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 SCFD1Q8WVM8 642 aa10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 ZKSCAN4Q969J2 545 aaPredicted RBP10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 ABHD8Q96I13 439 aa10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 CCDC138Q96M89 665 aa10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 MED15Q96RN5 788 aa10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 ISCA1Q9BUE6 129 aa10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 FAM47DPA6NHR8 397 aa10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 PDGFRBP09619 1106 aa10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 CAPZA2P47755 286 aa10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 PDCD2Q16342 344 aaPredicted RBP10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 TBC1D10CQ8IV04 446 aa10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 TMCO5AQ8N6Q1 288 aa10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 RAPGEF5Q92565 580 aa10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 HTATIP2Q9BUP3 242 aa10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 TIPINQ9BVW5 301 aa10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 BARHL2Q9NY43 387 aa10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 TBK1Q9UHD2 729 aa10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 IP6K2Q9UHH9 426 aa10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 ATP8A1Q9Y2Q0 1164 aa10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 SLC30A1Q9Y6M5 507 aa10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 FLT1P17948 1338 aa10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 POLRMTO00411 1230 aaKnown RBP10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 RBL2Q08999 1139 aa10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 COASYQ13057 564 aa10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 ENOSF1Q7L5Y1 443 aa10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 KDELC2Q7Z4H8 507 aa10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 PABPC5Q96DU9 382 aaKnown RBP10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 IGFLR1Q9H665 355 aa10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 CDC42BPBQ9Y5S2 1711 aa10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 EFCAB14O75071 495 aa10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 ZC3H11AO75152 810 aaKnown RBP eCLIP10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 RPLP2P05387 115 aaKnown RBP10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 ZBED6P86452 979 aa10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 EMC2Q15006 297 aa10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 KNOP1Q1ED39 458 aaKnown RBP10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 ARHGAP18Q8N392 663 aa10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 SHCBP1Q8NEM2 672 aa10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 TRIM15Q9C019 465 aa10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 INTS9Q9NV88 658 aaKnown RBP10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 ABI2Q9NYB9 513 aaPredicted RBP10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 SETBP1Q9Y6X0 1596 aa10.53□□□□□ -0.72
CLTCL1-202ENST00000427926 DIP2CQ9Y2E4 1556 aa10.52□□□□□ -0.72
CLTCL1-202ENST00000427926 KPNA7A9QM74 516 aa10.52□□□□□ -0.72
CLTCL1-202ENST00000427926 H0Y626 953 aa10.52□□□□□ -0.72
CLTCL1-202ENST00000427926 CFLARO15519 480 aa10.52□□□□□ -0.72
CLTCL1-202ENST00000427926 EGFRP00533 1210 aa10.52□□□□□ -0.72
CLTCL1-202ENST00000427926 ODC1P11926 461 aa10.52□□□□□ -0.72
CLTCL1-202ENST00000427926 PKN3Q6P5Z2 889 aa10.52□□□□□ -0.72
CLTCL1-202ENST00000427926 ATPAF2Q8N5M1 289 aa10.52□□□□□ -0.72
CLTCL1-202ENST00000427926 ATG4CQ96DT6 458 aa10.52□□□□□ -0.72
CLTCL1-202ENST00000427926 VPS11Q9H270 941 aa10.52□□□□□ -0.72
CLTCL1-202ENST00000427926 NYAP2Q9P242 653 aa10.52□□□□□ -0.72
CLTCL1-202ENST00000427926 NAGPAQ9UK23 515 aa10.52□□□□□ -0.72
CLTCL1-202ENST00000427926 TULP4Q9NRJ4 1543 aa10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 RGL2O15211 777 aa10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 KRT38O76015 456 aa10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 CKMP06732 381 aa10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 IFNAR2P48551 515 aa10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 ATP1A2P50993 1020 aa10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 DPYDQ12882 1025 aa10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 STARD3Q14849 445 aa10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 CHSY1Q86X52 802 aa10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 AIFM3Q96NN9 605 aa10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 SPATS2LQ9NUQ6 558 aaKnown RBP10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 THG1LQ9NWX6 298 aaKnown RBP10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 OPHN1O60890 802 aa10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 AMHP03971 560 aa10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 ATP1A1P05023 1023 aaKnown RBP10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 AVPR1AP37288 418 aa10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 CUL4AQ13619 759 aa10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 E4F1Q66K89 784 aaPredicted RBP10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 RASSF3Q86WH2 238 aa10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 CHAMP1Q96JM3 812 aa10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 HEMGNQ9BXL5 484 aa10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 MROH8Q9H579 483 aa10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 TUFT1Q9NNX1 390 aa10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 PRMT7Q9NVM4 692 aaPredicted RBP10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 ZW10O43264 779 aa10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 NPTXRO95502 500 aa10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 MBL2P11226 248 aaPredicted RBP10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 CHRNA3P32297 505 aa10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 DR1Q01658 176 aa10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 PTPAQ15257 358 aa10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 TRIM72Q6ZMU5 477 aa10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 PID1Q7Z2X4 250 aa10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 NHEJ1Q9H9Q4 299 aaPredicted RBP10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 AKAP7Q9P0M2 348 aaPredicted RBP10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 L3MBTL1Q9Y468 752 aa10.52□□□□□ -0.73
CLTCL1-202ENST00000427926 ENC1O14682 589 aa10.51□□□□□ -0.73
CLTCL1-202ENST00000427926 IGKV5-2P06315 115 aa10.51□□□□□ -0.73
CLTCL1-202ENST00000427926 LIG3P49916 1009 aa10.51□□□□□ -0.73
CLTCL1-202ENST00000427926 GPC5P78333 572 aa10.51□□□□□ -0.73
CLTCL1-202ENST00000427926 APBA1Q02410 837 aa10.51□□□□□ -0.73
CLTCL1-202ENST00000427926 MAPRE1Q15691 268 aaKnown RBP10.51□□□□□ -0.73
CLTCL1-202ENST00000427926 LMBRD2Q68DH5 695 aaPredicted RBP10.51□□□□□ -0.73
CLTCL1-202ENST00000427926 LINC00301Q8NCQ3 95 aa10.51□□□□□ -0.73
CLTCL1-202ENST00000427926 PPHLN1Q8NEY8 458 aaKnown RBP10.51□□□□□ -0.73
CLTCL1-202ENST00000427926 SLC7A14Q8TBB6 771 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms