RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 STRA6Q9BX79 667 aa6.29□□□□□ -1.4
HERPUD2-204ENST00000426180 IFIH1Q9BYX4 1025 aaKnown RBP6.29□□□□□ -1.4
HERPUD2-204ENST00000426180 INO80BQ9C086 356 aaPredicted RBP6.29□□□□□ -1.4
HERPUD2-204ENST00000426180 LRRC27Q9C0I9 530 aa6.29□□□□□ -1.4
HERPUD2-204ENST00000426180 FZD8Q9H461 694 aa6.29□□□□□ -1.4
HERPUD2-204ENST00000426180 SLC39A2Q9NP94 309 aa6.29□□□□□ -1.4
HERPUD2-204ENST00000426180 KMT5AQ9NQR1 393 aa6.29□□□□□ -1.4
HERPUD2-204ENST00000426180 PGPEP1Q9NXJ5 209 aa6.29□□□□□ -1.4
HERPUD2-204ENST00000426180 CXXC1Q9P0U4 656 aaPredicted RBP6.29□□□□□ -1.4
HERPUD2-204ENST00000426180 PCDHA5Q9Y5H7 936 aa6.29□□□□□ -1.4
HERPUD2-204ENST00000426180 MYH9P35579 1960 aaKnown RBP6.29□□□□□ -1.4
HERPUD2-204ENST00000426180 SIP14410 1827 aa6.29□□□□□ -1.4
HERPUD2-204ENST00000426180 LTBP2Q14767 1821 aa6.29□□□□□ -1.4
HERPUD2-204ENST00000426180 PVALEFA0A1B0GWK0 134 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 DENND3A2RUS2 1198 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 ANKRD63C9JTQ0 380 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 GOLGA6L22H0YM25 854 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 K7ERI5 159 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 BIN1O00499 593 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 ENPP3O14638 875 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 PRPF6O94906 941 aaKnown RBP6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 FGBP02675 491 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 RPLP2P05387 115 aaKnown RBP6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 GAP43P17677 238 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 ARF4P18085 180 aaPredicted RBP6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 IBSPP21815 317 aaPredicted RBP6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 BMP6P22004 513 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 SARSP49591 514 aaKnown RBP6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 DEFB103AP81534 67 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 GTF2BQ00403 316 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 CDC42EP1Q00587 391 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 PPP2R5AQ15172 486 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 SHHQ15465 462 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 UBXN11Q5T124 520 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 ISM2Q6H9L7 571 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 KANK3Q6NY19 840 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 SLC39A4Q6P5W5 647 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 CNKSR3Q6P9H4 555 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 EPM2AIP1Q7L775 607 aaPredicted RBP6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 OTOP2Q7RTS6 562 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 SRGAP1Q7Z6B7 1085 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 ZBTB8OSQ8IWT0 167 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 FAM178BQ8IXR5 827 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 CCDC65Q8IXS2 484 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 ELOA2Q8IYF1 753 aaPredicted RBP6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 SMYD4Q8IYR2 804 aaPredicted RBP6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 KIAA0895Q8NCT3 520 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 SPATA20Q8TB22 786 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 NANOS1Q8WY41 292 aaKnown RBP6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 SEPT8Q92599 483 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 ZBTB45Q96K62 511 aaPredicted RBP6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 LBHD1Q9BQE6 289 aaPredicted RBP6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 TARS2Q9BW92 718 aaKnown RBP6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 EIF2AQ9BY44 585 aaKnown RBP6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 NFKBIZQ9BYH8 718 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 HAPLN2Q9GZV7 340 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 C2orf40Q9H1Z8 148 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 PDZD7Q9H5P4 517 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 MRPL44Q9H9J2 332 aaKnown RBP6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 C17orf75Q9HAS0 396 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 LARSQ9P2J5 1176 aaKnown RBP6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 MAN1B1Q9UKM7 699 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 TBX20Q9UMR3 447 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 GDAQ9Y2T3 454 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 SQORQ9Y6N5 450 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 ZMYM2Q9UBW7 1377 aa6.28□□□□□ -1.4
HERPUD2-204ENST00000426180 PHLPP2Q6ZVD8 1323 aa6.27□□□□□ -1.41
HERPUD2-204ENST00000426180 SCN5AQ14524 2016 aa6.27□□□□□ -1.41
HERPUD2-204ENST00000426180 MEIS3P2A8K0S8 358 aa6.27□□□□□ -1.41
HERPUD2-204ENST00000426180 RNF225M0QZC1 329 aaPredicted RBP6.27□□□□□ -1.41
HERPUD2-204ENST00000426180 ACKR2O00590 384 aa6.27□□□□□ -1.41
HERPUD2-204ENST00000426180 ABLIM1O14639 778 aa6.27□□□□□ -1.41
HERPUD2-204ENST00000426180 GPR182O15218 404 aa6.27□□□□□ -1.41
HERPUD2-204ENST00000426180 RHOBTB3O94955 611 aa6.27□□□□□ -1.41
HERPUD2-204ENST00000426180 GCNT3O95395 438 aa6.27□□□□□ -1.41
HERPUD2-204ENST00000426180 PARNO95453 639 aaKnown RBP6.27□□□□□ -1.41
HERPUD2-204ENST00000426180 NPTXRO95502 500 aa6.27□□□□□ -1.41
HERPUD2-204ENST00000426180 MYL1P05976 194 aa6.27□□□□□ -1.41
HERPUD2-204ENST00000426180 SFPQP23246 707 aaKnown RBP eCLIP6.27□□□□□ -1.41
HERPUD2-204ENST00000426180 EFNA5P52803 228 aa6.27□□□□□ -1.41
HERPUD2-204ENST00000426180 SMTNP53814 917 aa6.27□□□□□ -1.41
HERPUD2-204ENST00000426180 WDR5P61964 334 aaKnown RBP6.27□□□□□ -1.41
HERPUD2-204ENST00000426180 FAM189BP81408 668 aa6.27□□□□□ -1.41
HERPUD2-204ENST00000426180 CBLBQ13191 982 aa6.27□□□□□ -1.41
HERPUD2-204ENST00000426180 PRPF4BQ13523 1007 aaKnown RBP6.27□□□□□ -1.41
HERPUD2-204ENST00000426180 NFKBIBQ15653 356 aa6.27□□□□□ -1.41
HERPUD2-204ENST00000426180 MAPK6Q16659 721 aa6.27□□□□□ -1.41
HERPUD2-204ENST00000426180 FAM187BQ17R55 369 aa6.27□□□□□ -1.41
HERPUD2-204ENST00000426180 FAM26FQ5R3K3 315 aa6.27□□□□□ -1.41
HERPUD2-204ENST00000426180 L1TD1Q5T7N2 865 aaKnown RBP6.27□□□□□ -1.41
HERPUD2-204ENST00000426180 PPP1R26Q5T8A7 1209 aaPredicted RBP6.27□□□□□ -1.41
HERPUD2-204ENST00000426180 RASIP1Q5U651 963 aa6.27□□□□□ -1.41
HERPUD2-204ENST00000426180 FAM109BQ6ICB4 259 aaPredicted RBP6.27□□□□□ -1.41
HERPUD2-204ENST00000426180 ZBTB33Q86T24 672 aa6.27□□□□□ -1.41
HERPUD2-204ENST00000426180 MAP4K3Q8IVH8 894 aa6.27□□□□□ -1.41
HERPUD2-204ENST00000426180 NELFCDQ8IXH7 590 aa6.27□□□□□ -1.41
HERPUD2-204ENST00000426180 RPUSD2Q8IZ73 545 aaKnown RBP6.27□□□□□ -1.41
HERPUD2-204ENST00000426180 USP38Q8NB14 1042 aa6.27□□□□□ -1.41
HERPUD2-204ENST00000426180 ZSWIM2Q8NEG5 633 aa6.27□□□□□ -1.41
HERPUD2-204ENST00000426180 SCFD1Q8WVM8 642 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms