RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 RGS20O76081 388 aa11.49□□□□□ -0.57
CUX1-205ENST00000425244 FTLP02792 175 aaPredicted RBP11.49□□□□□ -0.57
CUX1-205ENST00000425244 PLS3P13797 630 aa11.49□□□□□ -0.57
CUX1-205ENST00000425244 GTF2A1P52655 376 aaPredicted RBP11.49□□□□□ -0.57
CUX1-205ENST00000425244 UGCGQ16739 394 aa11.49□□□□□ -0.57
CUX1-205ENST00000425244 AADACL2Q6P093 401 aa11.49□□□□□ -0.57
CUX1-205ENST00000425244 HAUS6Q7Z4H7 955 aa11.49□□□□□ -0.57
CUX1-205ENST00000425244 SLC9A9Q8IVB4 645 aa11.49□□□□□ -0.57
CUX1-205ENST00000425244 RPUSD2Q8IZ73 545 aaKnown RBP11.49□□□□□ -0.57
CUX1-205ENST00000425244 RASGEF1CQ8N431 466 aa11.49□□□□□ -0.57
CUX1-205ENST00000425244 XXYLT1Q8NBI6 393 aa11.49□□□□□ -0.57
CUX1-205ENST00000425244 GPRC5AQ8NFJ5 357 aa11.49□□□□□ -0.57
CUX1-205ENST00000425244 LMO3Q8TAP4 145 aa11.49□□□□□ -0.57
CUX1-205ENST00000425244 ELMO3Q96BJ8 720 aa11.49□□□□□ -0.57
CUX1-205ENST00000425244 LRRC45Q96CN5 670 aa11.49□□□□□ -0.57
CUX1-205ENST00000425244 ATP6V1G3Q96LB4 118 aa11.49□□□□□ -0.57
CUX1-205ENST00000425244 SYT11Q9BT88 431 aa11.49□□□□□ -0.57
CUX1-205ENST00000425244 ACP6Q9NPH0 428 aa11.49□□□□□ -0.57
CUX1-205ENST00000425244 UTP11Q9Y3A2 253 aaKnown RBP11.49□□□□□ -0.57
CUX1-205ENST00000425244 PFASO15067 1338 aa11.49□□□□□ -0.57
CUX1-205ENST00000425244 ANKRD62A6NC57 917 aa11.49□□□□□ -0.57
CUX1-205ENST00000425244 SOWAHBA6NEL2 793 aa11.49□□□□□ -0.57
CUX1-205ENST00000425244 DDX3YO15523 660 aaKnown RBP11.49□□□□□ -0.57
CUX1-205ENST00000425244 ATMINO43313 823 aaPredicted RBP11.49□□□□□ -0.57
CUX1-205ENST00000425244 MYZAPP0CAP1 466 aa11.49□□□□□ -0.57
CUX1-205ENST00000425244 ALDH5A1P51649 535 aaPredicted RBP11.49□□□□□ -0.57
CUX1-205ENST00000425244 SKOR1P84550 965 aa11.49□□□□□ -0.57
CUX1-205ENST00000425244 STXBP2Q15833 593 aa11.49□□□□□ -0.57
CUX1-205ENST00000425244 UAP1Q16222 522 aaPredicted RBP11.49□□□□□ -0.57
CUX1-205ENST00000425244 NLRX1Q86UT6 975 aa11.49□□□□□ -0.57
CUX1-205ENST00000425244 SAAL1Q96ER3 474 aa11.49□□□□□ -0.57
CUX1-205ENST00000425244 STRA6Q9BX79 667 aa11.49□□□□□ -0.57
CUX1-205ENST00000425244 FAM107BQ9H098 131 aa11.49□□□□□ -0.57
CUX1-205ENST00000425244 SLITRK6Q9H5Y7 841 aa11.49□□□□□ -0.57
CUX1-205ENST00000425244 CPA4Q9UI42 421 aa11.49□□□□□ -0.57
CUX1-205ENST00000425244 DOCK5Q9H7D0 1870 aa11.49□□□□□ -0.57
CUX1-205ENST00000425244 KIAA1217Q5T5P2 1943 aa11.48□□□□□ -0.57
CUX1-205ENST00000425244 GOLGA6L10A0A0M3HER8 536 aa11.48□□□□□ -0.57
CUX1-205ENST00000425244 SLC25A27O95847 323 aa11.48□□□□□ -0.57
CUX1-205ENST00000425244 MYH11P35749 1972 aa11.48□□□□□ -0.57
CUX1-205ENST00000425244 MXI1P50539 228 aa11.48□□□□□ -0.57
CUX1-205ENST00000425244 MAP2K1Q02750 393 aaPredicted RBP11.48□□□□□ -0.57
CUX1-205ENST00000425244 KIF22Q14807 665 aa11.48□□□□□ -0.57
CUX1-205ENST00000425244 XKR9Q5GH70 373 aa11.48□□□□□ -0.57
CUX1-205ENST00000425244 FMNL3Q8IVF7 1028 aa11.48□□□□□ -0.57
CUX1-205ENST00000425244 PPM1KQ8N3J5 372 aa11.48□□□□□ -0.57
CUX1-205ENST00000425244 PLEKHO2Q8TD55 490 aa11.48□□□□□ -0.57
CUX1-205ENST00000425244 ALG3Q92685 438 aa11.48□□□□□ -0.57
CUX1-205ENST00000425244 GLG1Q92896 1179 aa11.48□□□□□ -0.57
CUX1-205ENST00000425244 NCAPGQ9BPX3 1015 aa11.48□□□□□ -0.57
CUX1-205ENST00000425244 ATP8B3O60423 1300 aa11.48□□□□□ -0.57
CUX1-205ENST00000425244 DHX9Q08211 1270 aaKnown RBP11.48□□□□□ -0.57
CUX1-205ENST00000425244 RGMBQ6NW40 437 aa11.48□□□□□ -0.57
CUX1-205ENST00000425244 KDM7AQ6ZMT4 941 aa11.48□□□□□ -0.57
CUX1-205ENST00000425244 RASAL3Q86YV0 1011 aa11.48□□□□□ -0.57
CUX1-205ENST00000425244 CBWD2Q8IUF1 395 aa11.48□□□□□ -0.57
CUX1-205ENST00000425244 SAMD3Q8N6K7 520 aa11.48□□□□□ -0.57
CUX1-205ENST00000425244 ALG6Q9Y672 507 aa11.48□□□□□ -0.57
CUX1-205ENST00000425244 IGF2BP3O00425 579 aaKnown RBP eCLIP11.47□□□□□ -0.57
CUX1-205ENST00000425244 SGPL1O95470 568 aa11.47□□□□□ -0.57
CUX1-205ENST00000425244 ADRB2P07550 413 aa11.47□□□□□ -0.57
CUX1-205ENST00000425244 MARCKSL1P49006 195 aa11.47□□□□□ -0.57
CUX1-205ENST00000425244 DR1Q01658 176 aa11.47□□□□□ -0.57
CUX1-205ENST00000425244 SP2Q02086 613 aa11.47□□□□□ -0.57
CUX1-205ENST00000425244 MESDQ14696 234 aa11.47□□□□□ -0.57
CUX1-205ENST00000425244 GNPTABQ3T906 1256 aa11.47□□□□□ -0.57
CUX1-205ENST00000425244 ODF2Q5BJF6 829 aa11.47□□□□□ -0.57
CUX1-205ENST00000425244 CYFIP1Q7L576 1253 aa11.47□□□□□ -0.57
CUX1-205ENST00000425244 CD302Q8IX05 232 aa11.47□□□□□ -0.57
CUX1-205ENST00000425244 KRT35Q92764 455 aa11.47□□□□□ -0.57
CUX1-205ENST00000425244 POP1Q99575 1024 aaKnown RBP11.47□□□□□ -0.57
CUX1-205ENST00000425244 ERVK-5Q9HDB9 667 aa11.47□□□□□ -0.57
CUX1-205ENST00000425244 IVNS1ABPQ9Y6Y0 642 aa11.47□□□□□ -0.57
CUX1-205ENST00000425244 UNCXA6NJT0 531 aa11.47□□□□□ -0.57
CUX1-205ENST00000425244 HMGB1P1B2RPK0 211 aaPredicted RBP11.47□□□□□ -0.57
CUX1-205ENST00000425244 CYP26A1O43174 497 aa11.47□□□□□ -0.57
CUX1-205ENST00000425244 CCNE2O96020 404 aa11.47□□□□□ -0.57
CUX1-205ENST00000425244 RFX1P22670 979 aa11.47□□□□□ -0.57
CUX1-205ENST00000425244 LSP1P33241 339 aa11.47□□□□□ -0.57
CUX1-205ENST00000425244 CORO7P57737 925 aa11.47□□□□□ -0.57
CUX1-205ENST00000425244 ZNF844Q08AG5 666 aa11.47□□□□□ -0.57
CUX1-205ENST00000425244 C1orf220Q5T0J3 134 aa11.47□□□□□ -0.57
CUX1-205ENST00000425244 EGFL6Q8IUX8 553 aa11.47□□□□□ -0.57
CUX1-205ENST00000425244 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.47□□□□□ -0.573e-7■■■■■ 94
CUX1-205ENST00000425244 ZIC5Q96T25 663 aa11.47□□□□□ -0.57
CUX1-205ENST00000425244 TMEM117Q9H0C3 514 aa11.47□□□□□ -0.57
CUX1-205ENST00000425244 TMBIM4Q9HC24 238 aa11.47□□□□□ -0.57
CUX1-205ENST00000425244 DBR1Q9UK59 544 aaKnown RBP11.47□□□□□ -0.57
CUX1-205ENST00000425244 ATP8A1Q9Y2Q0 1164 aa11.47□□□□□ -0.57
CUX1-205ENST00000425244 MCM3APO60318 1980 aa11.46□□□□□ -0.57
CUX1-205ENST00000425244 KIF3CO14782 793 aa11.46□□□□□ -0.57
CUX1-205ENST00000425244 SOX10P56693 466 aa11.46□□□□□ -0.57
CUX1-205ENST00000425244 ALCAMQ13740 583 aa11.46□□□□□ -0.57
CUX1-205ENST00000425244 MYBPC2Q14324 1141 aa11.46□□□□□ -0.57
CUX1-205ENST00000425244 LLGL1Q15334 1064 aa11.46□□□□□ -0.57
CUX1-205ENST00000425244 TAF1CQ15572 869 aaPredicted RBP11.46□□□□□ -0.57
CUX1-205ENST00000425244 EPC2Q52LR7 807 aa11.46□□□□□ -0.57
CUX1-205ENST00000425244 ANKRD23Q86SG2 305 aa11.46□□□□□ -0.57
CUX1-205ENST00000425244 RHOT2Q8IXI1 618 aa11.46□□□□□ -0.57
CUX1-205ENST00000425244 DNERQ8NFT8 737 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms