RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 DNAJB4Q9UDY4 337 aa23.46■■□□□ 1.35
CPNE1-211ENST00000420363 A0A087X0B3 334 aa23.45■■□□□ 1.34
CPNE1-211ENST00000420363 TBX10O75333 385 aa23.45■■□□□ 1.34
CPNE1-211ENST00000420363 RECQL4O94761 1208 aa23.45■■□□□ 1.34
CPNE1-211ENST00000420363 DDHD2O94830 711 aa23.45■■□□□ 1.34
CPNE1-211ENST00000420363 AKAP5P24588 427 aa23.45■■□□□ 1.34
CPNE1-211ENST00000420363 SLC11A1P49279 550 aa23.45■■□□□ 1.34
CPNE1-211ENST00000420363 DNM1Q05193 864 aaKnown RBP23.45■■□□□ 1.34
CPNE1-211ENST00000420363 ZNF568Q3ZCX4 644 aa23.45■■□□□ 1.34
CPNE1-211ENST00000420363 GBP3Q9H0R5 595 aa23.45■■□□□ 1.34
CPNE1-211ENST00000420363 CDT1Q9H211 546 aa23.45■■□□□ 1.34
CPNE1-211ENST00000420363 CUEDC2Q9H467 287 aa23.45■■□□□ 1.34
CPNE1-211ENST00000420363 PARP2Q9UGN5 583 aa23.45■■□□□ 1.34
CPNE1-211ENST00000420363 USP20Q9Y2K6 914 aa23.45■■□□□ 1.34
CPNE1-211ENST00000420363 ZDHHC9Q9Y397 364 aa23.45■■□□□ 1.34
CPNE1-211ENST00000420363 ATP6V1DQ9Y5K8 247 aa23.45■■□□□ 1.34
CPNE1-211ENST00000420363 ABLIM1O14639 778 aa23.44■■□□□ 1.34
CPNE1-211ENST00000420363 TOM1L1O75674 476 aa23.44■■□□□ 1.34
CPNE1-211ENST00000420363 HOXD11P31277 338 aaPredicted RBP23.44■■□□□ 1.34
CPNE1-211ENST00000420363 FOXD4L6Q3SYB3 417 aaPredicted RBP23.44■■□□□ 1.34
CPNE1-211ENST00000420363 MPZL3Q6UWV2 235 aa23.44■■□□□ 1.34
CPNE1-211ENST00000420363 FOXD4L3Q6VB84 417 aaPredicted RBP23.44■■□□□ 1.34
CPNE1-211ENST00000420363 HAUS6Q7Z4H7 955 aa23.44■■□□□ 1.34
CPNE1-211ENST00000420363 TMEM173Q86WV6 379 aaPredicted RBP23.44■■□□□ 1.34
CPNE1-211ENST00000420363 COLGALT2Q8IYK4 626 aa23.44■■□□□ 1.34
CPNE1-211ENST00000420363 MYCT1Q8N699 235 aa23.44■■□□□ 1.34
CPNE1-211ENST00000420363 MICAL1Q8TDZ2 1067 aa23.44■■□□□ 1.34
CPNE1-211ENST00000420363 FIZ1Q96SL8 496 aa23.44■■□□□ 1.34
CPNE1-211ENST00000420363 CDCA3Q99618 268 aaPredicted RBP23.44■■□□□ 1.34
CPNE1-211ENST00000420363 TARS2Q9BW92 718 aaKnown RBP23.44■■□□□ 1.34
CPNE1-211ENST00000420363 ST6GALNAC4Q9H4F1 302 aa23.44■■□□□ 1.34
CPNE1-211ENST00000420363 ENTPD7Q9NQZ7 604 aa23.44■■□□□ 1.34
CPNE1-211ENST00000420363 SNTG2Q9NY99 539 aa23.44■■□□□ 1.34
CPNE1-211ENST00000420363 SEL1LQ9UBV2 794 aa23.44■■□□□ 1.34
CPNE1-211ENST00000420363 RCOR1Q9UKL0 485 aa23.44■■□□□ 1.34
CPNE1-211ENST00000420363 NT5C1B-RDH14C9J2C7 533 aa23.43■■□□□ 1.34
CPNE1-211ENST00000420363 K7ENM7 598 aa23.43■■□□□ 1.34
CPNE1-211ENST00000420363 TRAK2O60296 914 aa23.43■■□□□ 1.34
CPNE1-211ENST00000420363 MCF2P10911 925 aa23.43■■□□□ 1.34
CPNE1-211ENST00000420363 GRM5P41594 1212 aa23.43■■□□□ 1.34
CPNE1-211ENST00000420363 NRIP1P48552 1158 aa23.43■■□□□ 1.34
CPNE1-211ENST00000420363 ERVFC1P60507 584 aa23.43■■□□□ 1.34
CPNE1-211ENST00000420363 E2F4Q16254 413 aa23.43■■□□□ 1.34
CPNE1-211ENST00000420363 SHC4Q6S5L8 630 aa23.43■■□□□ 1.34
CPNE1-211ENST00000420363 ADGRD2Q7Z7M1 963 aa23.43■■□□□ 1.34
CPNE1-211ENST00000420363 DDX53Q86TM3 631 aaKnown RBP23.43■■□□□ 1.34
CPNE1-211ENST00000420363 RBM23Q86U06 439 aaKnown RBP23.43■■□□□ 1.34
CPNE1-211ENST00000420363 EFHBQ8N7U6 833 aa23.43■■□□□ 1.34
CPNE1-211ENST00000420363 DDX12PQ92771 950 aa23.43■■□□□ 1.34
CPNE1-211ENST00000420363 TCF25Q9BQ70 676 aa23.43■■□□□ 1.34
CPNE1-211ENST00000420363 ALDH2P05091 517 aa23.42■■□□□ 1.34
CPNE1-211ENST00000420363 ME1P48163 572 aa23.42■■□□□ 1.34
CPNE1-211ENST00000420363 KRT85P78386 507 aa23.42■■□□□ 1.34
CPNE1-211ENST00000420363 BMS1Q14692 1282 aaKnown RBP23.42■■□□□ 1.34
CPNE1-211ENST00000420363 BCL7CQ8WUZ0 217 aaPredicted RBP23.42■■□□□ 1.34
CPNE1-211ENST00000420363 DNAJC19Q96DA6 116 aa23.42■■□□□ 1.34
CPNE1-211ENST00000420363 ZBP1Q9H171 429 aa23.42■■□□□ 1.34
CPNE1-211ENST00000420363 TNMDQ9H2S6 317 aa23.42■■□□□ 1.34
CPNE1-211ENST00000420363 TLE6Q9H808 572 aa23.42■■□□□ 1.34
CPNE1-211ENST00000420363 MAGEF1Q9HAY2 307 aa23.42■■□□□ 1.34
CPNE1-211ENST00000420363 MIOSQ9NXC5 875 aa23.42■■□□□ 1.34
CPNE1-211ENST00000420363 PCDHA7Q9UN72 937 aa23.42■■□□□ 1.34
CPNE1-211ENST00000420363 FAN1Q9Y2M0 1017 aa23.42■■□□□ 1.34
CPNE1-211ENST00000420363 CITO14578 2027 aa23.42■■□□□ 1.34
CPNE1-211ENST00000420363 FRMD3A2A2Y4 597 aa23.41■■□□□ 1.34
CPNE1-211ENST00000420363 MYMKA6NI61 221 aa23.41■■□□□ 1.34
CPNE1-211ENST00000420363 NRP1O14786 923 aa23.41■■□□□ 1.34
CPNE1-211ENST00000420363 NR1I2O75469 434 aa23.41■■□□□ 1.34
CPNE1-211ENST00000420363 PIGRP01833 764 aa23.41■■□□□ 1.34
CPNE1-211ENST00000420363 GAP43P17677 238 aa23.41■■□□□ 1.34
CPNE1-211ENST00000420363 GTF2BQ00403 316 aa23.41■■□□□ 1.34
CPNE1-211ENST00000420363 SMC1AQ14683 1233 aaKnown RBP23.41■■□□□ 1.34
CPNE1-211ENST00000420363 NOLC1Q14978 699 aaKnown RBP eCLIP23.41■■□□□ 1.343e-8■□□□□ 8.2
CPNE1-211ENST00000420363 PLPP4Q5VZY2 271 aa23.41■■□□□ 1.34
CPNE1-211ENST00000420363 MAP4K3Q8IVH8 894 aa23.41■■□□□ 1.34
CPNE1-211ENST00000420363 MSLNLQ96KJ4 702 aa23.41■■□□□ 1.34
CPNE1-211ENST00000420363 CCDC94Q9BW85 323 aaPredicted RBP23.41■■□□□ 1.34
CPNE1-211ENST00000420363 TOPORSQ9NS56 1045 aaPredicted RBP23.41■■□□□ 1.34
CPNE1-211ENST00000420363 MARCH5Q9NX47 278 aa23.41■■□□□ 1.34
CPNE1-211ENST00000420363 KLK14Q9P0G3 267 aa23.41■■□□□ 1.34
CPNE1-211ENST00000420363 PCDHGC5Q9Y5F6 944 aa23.41■■□□□ 1.34
CPNE1-211ENST00000420363 IRAK3Q9Y616 596 aa23.41■■□□□ 1.34
CPNE1-211ENST00000420363 PTGESO14684 152 aa23.4■■□□□ 1.34
CPNE1-211ENST00000420363 MCL1Q07820 350 aa23.4■■□□□ 1.34
CPNE1-211ENST00000420363 TUSC3Q13454 348 aa23.4■■□□□ 1.34
CPNE1-211ENST00000420363 RESP18Q5W5W9 173 aa23.4■■□□□ 1.34
CPNE1-211ENST00000420363 DYMQ7RTS9 669 aa23.4■■□□□ 1.34
CPNE1-211ENST00000420363 TMC7Q7Z402 723 aa23.4■■□□□ 1.34
CPNE1-211ENST00000420363 VPS52Q8N1B4 723 aa23.4■■□□□ 1.34
CPNE1-211ENST00000420363 PDILTQ8N807 584 aa23.4■■□□□ 1.34
CPNE1-211ENST00000420363 IQUBQ8NA54 791 aa23.4■■□□□ 1.34
CPNE1-211ENST00000420363 HVCN1Q96D96 273 aa23.4■■□□□ 1.34
CPNE1-211ENST00000420363 PYM1Q9BRP8 204 aaKnown RBP23.4■■□□□ 1.34
CPNE1-211ENST00000420363 LRRC27Q9C0I9 530 aa23.4■■□□□ 1.34
CPNE1-211ENST00000420363 ZHX3Q9H4I2 956 aa23.4■■□□□ 1.34
CPNE1-211ENST00000420363 OLFML3Q9NRN5 406 aa23.4■■□□□ 1.34
CPNE1-211ENST00000420363 KBTBD4Q9NVX7 518 aa23.4■■□□□ 1.34
CPNE1-211ENST00000420363 CLEC1BQ9P126 229 aa23.4■■□□□ 1.34
CPNE1-211ENST00000420363 TBX20Q9UMR3 447 aa23.4■■□□□ 1.34
CPNE1-211ENST00000420363 PDCD11Q14690 1871 aaKnown RBP23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms