RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 UVSSAQ2YD98 709 aa11.76□□□□□ -0.53
RAPGEF1-205ENST00000419442 PABPC1LQ4VXU2 614 aaKnown RBP11.76□□□□□ -0.53
RAPGEF1-205ENST00000419442 RTP2Q5QGT7 225 aa11.76□□□□□ -0.53
RAPGEF1-205ENST00000419442 JAKMIP3Q5VZ66 844 aa11.76□□□□□ -0.53
RAPGEF1-205ENST00000419442 TANGO2Q6ICL3 276 aa11.76□□□□□ -0.53
RAPGEF1-205ENST00000419442 PRSS55Q6UWB4 352 aaPredicted RBP11.76□□□□□ -0.53
RAPGEF1-205ENST00000419442 RTL10Q7L3V2 364 aa11.76□□□□□ -0.53
RAPGEF1-205ENST00000419442 SRGAP1Q7Z6B7 1085 aa11.76□□□□□ -0.53
RAPGEF1-205ENST00000419442 C12orf50Q8NA57 414 aaPredicted RBP11.76□□□□□ -0.53
RAPGEF1-205ENST00000419442 GSTCDQ8NEC7 633 aa11.76□□□□□ -0.53
RAPGEF1-205ENST00000419442 RDM1Q8NG50 284 aa11.76□□□□□ -0.53
RAPGEF1-205ENST00000419442 FAM3CQ92520 227 aa11.76□□□□□ -0.53
RAPGEF1-205ENST00000419442 GATA6Q92908 595 aa11.76□□□□□ -0.53
RAPGEF1-205ENST00000419442 NLRP4Q96MN2 994 aa11.76□□□□□ -0.53
RAPGEF1-205ENST00000419442 RIT2Q99578 217 aa11.76□□□□□ -0.53
RAPGEF1-205ENST00000419442 MINDY3Q9H8M7 445 aa11.76□□□□□ -0.53
RAPGEF1-205ENST00000419442 HCFC1R1Q9NWW0 138 aa11.76□□□□□ -0.53
RAPGEF1-205ENST00000419442 SEPT9Q9UHD8 586 aaPredicted RBP11.76□□□□□ -0.53
RAPGEF1-205ENST00000419442 LHX6Q9UPM6 363 aa11.76□□□□□ -0.53
RAPGEF1-205ENST00000419442 IPPQ9Y573 584 aa11.76□□□□□ -0.53
RAPGEF1-205ENST00000419442 ZMYM2Q9UBW7 1377 aa11.76□□□□□ -0.53
RAPGEF1-205ENST00000419442 ASPMQ8IZT6 3477 aa11.76□□□□□ -0.53
RAPGEF1-205ENST00000419442 SDK1Q7Z5N4 2213 aa11.75□□□□□ -0.53
RAPGEF1-205ENST00000419442 TMEM150BA6NC51 233 aa11.75□□□□□ -0.53
RAPGEF1-205ENST00000419442 EPN2O95208 641 aa11.75□□□□□ -0.53
RAPGEF1-205ENST00000419442 MCM5P33992 734 aa11.75□□□□□ -0.53
RAPGEF1-205ENST00000419442 PTGDRQ13258 359 aa11.75□□□□□ -0.53
RAPGEF1-205ENST00000419442 PRR16Q569H4 304 aa11.75□□□□□ -0.53
RAPGEF1-205ENST00000419442 PLA2G2CQ5R387 149 aa11.75□□□□□ -0.53
RAPGEF1-205ENST00000419442 B3GNT9Q6UX72 402 aa11.75□□□□□ -0.53
RAPGEF1-205ENST00000419442 SGMS1Q86VZ5 419 aa11.75□□□□□ -0.53
RAPGEF1-205ENST00000419442 CHD1LQ86WJ1 897 aa11.75□□□□□ -0.53
RAPGEF1-205ENST00000419442 RAB11FIP4Q86YS3 637 aa11.75□□□□□ -0.53
RAPGEF1-205ENST00000419442 MAP4K3Q8IVH8 894 aa11.75□□□□□ -0.53
RAPGEF1-205ENST00000419442 LNX1Q8TBB1 728 aaPredicted RBP11.75□□□□□ -0.53
RAPGEF1-205ENST00000419442 ING5Q8WYH8 240 aa11.75□□□□□ -0.53
RAPGEF1-205ENST00000419442 CCDC51Q96ER9 411 aa11.75□□□□□ -0.53
RAPGEF1-205ENST00000419442 ZFP42Q96MM3 310 aa11.75□□□□□ -0.53
RAPGEF1-205ENST00000419442 JPH2Q9BR39 696 aaPredicted RBP11.75□□□□□ -0.53
RAPGEF1-205ENST00000419442 ADAM33Q9BZ11 813 aa11.75□□□□□ -0.53
RAPGEF1-205ENST00000419442 RNF39Q9H2S5 420 aa11.75□□□□□ -0.53
RAPGEF1-205ENST00000419442 GIT1Q9Y2X7 761 aa11.75□□□□□ -0.53
RAPGEF1-205ENST00000419442 MRPS23Q9Y3D9 190 aaKnown RBP11.75□□□□□ -0.53
RAPGEF1-205ENST00000419442 COL4A3BPQ9Y5P4 624 aa11.75□□□□□ -0.53
RAPGEF1-205ENST00000419442 SLC12A7Q9Y666 1083 aa11.75□□□□□ -0.53
RAPGEF1-205ENST00000419442 SETXQ7Z333 2677 aaKnown RBP11.74□□□□□ -0.53
RAPGEF1-205ENST00000419442 ARID2Q68CP9 1835 aa11.74□□□□□ -0.53
RAPGEF1-205ENST00000419442 ESYT2A0FGR8 921 aa11.74□□□□□ -0.53
RAPGEF1-205ENST00000419442 ADAMTS3O15072 1205 aa11.74□□□□□ -0.53
RAPGEF1-205ENST00000419442 MSH4O15457 936 aa11.74□□□□□ -0.53
RAPGEF1-205ENST00000419442 EDIL3O43854 480 aa11.74□□□□□ -0.53
RAPGEF1-205ENST00000419442 RAP1GAPP47736 663 aa11.74□□□□□ -0.53
RAPGEF1-205ENST00000419442 MLLT6P55198 1093 aaPredicted RBP11.74□□□□□ -0.53
RAPGEF1-205ENST00000419442 RAB33AQ14088 237 aa11.74□□□□□ -0.53
RAPGEF1-205ENST00000419442 PSMD5Q16401 504 aa11.74□□□□□ -0.53
RAPGEF1-205ENST00000419442 SLC5A9Q2M3M2 681 aa11.74□□□□□ -0.53
RAPGEF1-205ENST00000419442 PSAPL1Q6NUJ1 521 aa11.74□□□□□ -0.53
RAPGEF1-205ENST00000419442 WDR5BQ86VZ2 330 aa11.74□□□□□ -0.53
RAPGEF1-205ENST00000419442 EXOC6Q8TAG9 804 aa11.74□□□□□ -0.53
RAPGEF1-205ENST00000419442 SLC7A14Q8TBB6 771 aa11.74□□□□□ -0.53
RAPGEF1-205ENST00000419442 SLC5A5Q92911 643 aa11.74□□□□□ -0.53
RAPGEF1-205ENST00000419442 IRF7Q92985 503 aa11.74□□□□□ -0.53
RAPGEF1-205ENST00000419442 MCRS1Q96EZ8 462 aa11.74□□□□□ -0.53
RAPGEF1-205ENST00000419442 EIF2AQ9BY44 585 aaKnown RBP11.74□□□□□ -0.53
RAPGEF1-205ENST00000419442 ARRDC1-AS1Q9H2J1 176 aa11.74□□□□□ -0.53
RAPGEF1-205ENST00000419442 UNC45AQ9H3U1 944 aa11.74□□□□□ -0.53
RAPGEF1-205ENST00000419442 BRD9Q9H8M2 597 aa11.74□□□□□ -0.53
RAPGEF1-205ENST00000419442 ZNF334Q9HCZ1 680 aaPredicted RBP11.74□□□□□ -0.53
RAPGEF1-205ENST00000419442 POLIQ9UNA4 740 aa11.74□□□□□ -0.53
RAPGEF1-205ENST00000419442 SF3B1O75533 1304 aaKnown RBP eCLIP11.74□□□□□ -0.53
RAPGEF1-205ENST00000419442 ADAM12O43184 909 aa11.73□□□□□ -0.53
RAPGEF1-205ENST00000419442 AXLP30530 894 aa11.73□□□□□ -0.53
RAPGEF1-205ENST00000419442 ADAMTS20P59510 1910 aa11.73□□□□□ -0.53
RAPGEF1-205ENST00000419442 GRIK3Q13003 919 aa11.73□□□□□ -0.53
RAPGEF1-205ENST00000419442 AXDND1Q5T1B0 1012 aaPredicted RBP11.73□□□□□ -0.53
RAPGEF1-205ENST00000419442 CEP68Q76N32 757 aa11.73□□□□□ -0.53
RAPGEF1-205ENST00000419442 MICU3Q86XE3 530 aa11.73□□□□□ -0.53
RAPGEF1-205ENST00000419442 SPOCK2Q92563 424 aa11.73□□□□□ -0.53
RAPGEF1-205ENST00000419442 SH2D3AQ9BRG2 576 aa11.73□□□□□ -0.53
RAPGEF1-205ENST00000419442 TTPALQ9BTX7 342 aa11.73□□□□□ -0.53
RAPGEF1-205ENST00000419442 TRMT61BQ9BVS5 477 aaKnown RBP11.73□□□□□ -0.53
RAPGEF1-205ENST00000419442 TEKT3Q9BXF9 490 aa11.73□□□□□ -0.53
RAPGEF1-205ENST00000419442 ZMYND12Q9H0C1 365 aa11.73□□□□□ -0.53
RAPGEF1-205ENST00000419442 RBM28Q9NW13 759 aaKnown RBP11.73□□□□□ -0.53
RAPGEF1-205ENST00000419442 PCDHGA5Q9Y5G8 931 aa11.73□□□□□ -0.53
RAPGEF1-205ENST00000419442 PIAS3Q9Y6X2 628 aa11.73□□□□□ -0.53
RAPGEF1-205ENST00000419442 V9GY48 417 aaPredicted RBP11.73□□□□□ -0.53
RAPGEF1-205ENST00000419442 ARNTLO00327 626 aa11.72□□□□□ -0.53
RAPGEF1-205ENST00000419442 AXIN1O15169 862 aa11.72□□□□□ -0.53
RAPGEF1-205ENST00000419442 GAS7O60861 476 aa11.72□□□□□ -0.53
RAPGEF1-205ENST00000419442 TADA2AO75478 443 aa11.72□□□□□ -0.53
RAPGEF1-205ENST00000419442 PSMD10O75832 226 aa11.72□□□□□ -0.53
RAPGEF1-205ENST00000419442 MICAL2O94851 1124 aa11.72□□□□□ -0.53
RAPGEF1-205ENST00000419442 RHOP08100 348 aa11.72□□□□□ -0.53
RAPGEF1-205ENST00000419442 CEBPBP17676 345 aa11.72□□□□□ -0.53
RAPGEF1-205ENST00000419442 NOVA1P51513 510 aaKnown RBP11.72□□□□□ -0.53
RAPGEF1-205ENST00000419442 NUCB1Q02818 461 aa11.72□□□□□ -0.53
RAPGEF1-205ENST00000419442 GRM2Q14416 872 aa11.72□□□□□ -0.53
RAPGEF1-205ENST00000419442 HSP90AA2PQ14568 343 aaPredicted RBP11.72□□□□□ -0.53
RAPGEF1-205ENST00000419442 PCBP1Q15365 356 aaKnown RBP eCLIP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms