RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 DHX8Q14562 1220 aaKnown RBP22.65■■□□□ 1.22
PKNOX1-202ENST00000418336 SMC1AQ14683 1233 aaKnown RBP22.65■■□□□ 1.22
PKNOX1-202ENST00000418336 PTPN14Q15678 1187 aa22.65■■□□□ 1.22
PKNOX1-202ENST00000418336 TMC7Q7Z402 723 aa22.65■■□□□ 1.22
PKNOX1-202ENST00000418336 HACE1Q8IYU2 909 aa22.65■■□□□ 1.22
PKNOX1-202ENST00000418336 DNAJC19Q96DA6 116 aa22.65■■□□□ 1.22
PKNOX1-202ENST00000418336 ZBTB45Q96K62 511 aaPredicted RBP22.65■■□□□ 1.22
PKNOX1-202ENST00000418336 STK17AQ9UEE5 414 aa22.65■■□□□ 1.22
PKNOX1-202ENST00000418336 DAXXQ9UER7 740 aaPredicted RBP22.65■■□□□ 1.22
PKNOX1-202ENST00000418336 MYMKA6NI61 221 aa22.64■■□□□ 1.21
PKNOX1-202ENST00000418336 SPTLC2O15270 562 aa22.64■■□□□ 1.21
PKNOX1-202ENST00000418336 MBTPS2O43462 519 aa22.64■■□□□ 1.21
PKNOX1-202ENST00000418336 CLASP2O75122 1294 aaKnown RBP22.64■■□□□ 1.21
PKNOX1-202ENST00000418336 GRM5P41594 1212 aa22.64■■□□□ 1.21
PKNOX1-202ENST00000418336 E2F4Q16254 413 aa22.64■■□□□ 1.21
PKNOX1-202ENST00000418336 SMRP1Q8NCR6 262 aa22.64■■□□□ 1.21
PKNOX1-202ENST00000418336 PPP2R3CQ969Q6 453 aa22.64■■□□□ 1.21
PKNOX1-202ENST00000418336 ADPGKQ9BRR6 497 aa22.64■■□□□ 1.21
PKNOX1-202ENST00000418336 LARSQ9P2J5 1176 aaKnown RBP22.64■■□□□ 1.21
PKNOX1-202ENST00000418336 PRG3Q9Y2Y8 225 aaPredicted RBP22.64■■□□□ 1.21
PKNOX1-202ENST00000418336 FAM189A1O60320 539 aa22.63■■□□□ 1.21
PKNOX1-202ENST00000418336 MCF2P10911 925 aa22.63■■□□□ 1.21
PKNOX1-202ENST00000418336 IGFBP6P24592 240 aaPredicted RBP22.63■■□□□ 1.21
PKNOX1-202ENST00000418336 OR1G1P47890 313 aa22.63■■□□□ 1.21
PKNOX1-202ENST00000418336 CLUL1Q15846 466 aa22.63■■□□□ 1.21
PKNOX1-202ENST00000418336 SHC4Q6S5L8 630 aa22.63■■□□□ 1.21
PKNOX1-202ENST00000418336 CD300LGQ6UXG3 332 aa22.63■■□□□ 1.21
PKNOX1-202ENST00000418336 HAUS6Q7Z4H7 955 aa22.63■■□□□ 1.21
PKNOX1-202ENST00000418336 FAM178BQ8IXR5 827 aa22.63■■□□□ 1.21
PKNOX1-202ENST00000418336 RABGGTAQ92696 567 aa22.63■■□□□ 1.21
PKNOX1-202ENST00000418336 FAM193BQ96PV7 902 aaPredicted RBP22.63■■□□□ 1.21
PKNOX1-202ENST00000418336 PPP1R10Q96QC0 940 aaKnown RBP22.63■■□□□ 1.21
PKNOX1-202ENST00000418336 HERC2P3Q9BVR0 1158 aa22.63■■□□□ 1.21
PKNOX1-202ENST00000418336 STRA6Q9BX79 667 aa22.63■■□□□ 1.21
PKNOX1-202ENST00000418336 S1PR5Q9H228 398 aa22.63■■□□□ 1.21
PKNOX1-202ENST00000418336 PARVGQ9HBI0 331 aa22.63■■□□□ 1.21
PKNOX1-202ENST00000418336 CXCL14O95715 111 aa22.62■■□□□ 1.21
PKNOX1-202ENST00000418336 PIGRP01833 764 aa22.62■■□□□ 1.21
PKNOX1-202ENST00000418336 SOD2P04179 222 aa22.62■■□□□ 1.21
PKNOX1-202ENST00000418336 SMTNP53814 917 aa22.62■■□□□ 1.21
PKNOX1-202ENST00000418336 MCL1Q07820 350 aa22.62■■□□□ 1.21
PKNOX1-202ENST00000418336 TUSC3Q13454 348 aa22.62■■□□□ 1.21
PKNOX1-202ENST00000418336 STK38Q15208 465 aa22.62■■□□□ 1.21
PKNOX1-202ENST00000418336 SMAD2Q15796 467 aaKnown RBP22.62■■□□□ 1.21
PKNOX1-202ENST00000418336 PUS10Q3MIT2 529 aaKnown RBP22.62■■□□□ 1.21
PKNOX1-202ENST00000418336 ZNF568Q3ZCX4 644 aa22.62■■□□□ 1.21
PKNOX1-202ENST00000418336 SLC39A4Q6P5W5 647 aa22.62■■□□□ 1.21
PKNOX1-202ENST00000418336 MPZL3Q6UWV2 235 aa22.62■■□□□ 1.21
PKNOX1-202ENST00000418336 ZPBP2Q6X784 338 aa22.62■■□□□ 1.21
PKNOX1-202ENST00000418336 SLC22A17Q8WUG5 538 aa22.62■■□□□ 1.21
PKNOX1-202ENST00000418336 ZNF396Q96N95 335 aaPredicted RBP22.62■■□□□ 1.21
PKNOX1-202ENST00000418336 GPR62Q9BZJ7 368 aa22.62■■□□□ 1.21
PKNOX1-202ENST00000418336 CHST7Q9NS84 486 aa22.62■■□□□ 1.21
PKNOX1-202ENST00000418336 KCNG1Q9UIX4 513 aa22.62■■□□□ 1.21
PKNOX1-202ENST00000418336 CD207Q9UJ71 328 aa22.62■■□□□ 1.21
PKNOX1-202ENST00000418336 GDAQ9Y2T3 454 aa22.62■■□□□ 1.21
PKNOX1-202ENST00000418336 TNFRSF10AO00220 468 aa22.61■■□□□ 1.21
PKNOX1-202ENST00000418336 TOM1L1O75674 476 aa22.61■■□□□ 1.21
PKNOX1-202ENST00000418336 PPP1R37O75864 691 aa22.61■■□□□ 1.21
PKNOX1-202ENST00000418336 NMT1P30419 496 aaKnown RBP22.61■■□□□ 1.21
PKNOX1-202ENST00000418336 NDUFV1P49821 464 aa22.61■■□□□ 1.21
PKNOX1-202ENST00000418336 SMAD4Q13485 552 aaKnown RBP22.61■■□□□ 1.21
PKNOX1-202ENST00000418336 PDCD11Q14690 1871 aaKnown RBP22.61■■□□□ 1.21
PKNOX1-202ENST00000418336 KIAA0319Q5VV43 1072 aa22.61■■□□□ 1.21
PKNOX1-202ENST00000418336 RRAGBQ5VZM2 374 aa22.61■■□□□ 1.21
PKNOX1-202ENST00000418336 SYCE2Q6PIF2 218 aa22.61■■□□□ 1.21
PKNOX1-202ENST00000418336 EP400NLQ6ZTU2 488 aa22.61■■□□□ 1.21
PKNOX1-202ENST00000418336 MYCT1Q8N699 235 aa22.61■■□□□ 1.21
PKNOX1-202ENST00000418336 FEZF2Q8TBJ5 459 aa22.61■■□□□ 1.21
PKNOX1-202ENST00000418336 DDX12PQ92771 950 aa22.61■■□□□ 1.21
PKNOX1-202ENST00000418336 KHSRPQ92945 711 aaKnown RBP eCLIP22.61■■□□□ 1.21
PKNOX1-202ENST00000418336 CHAMP1Q96JM3 812 aa22.61■■□□□ 1.21
PKNOX1-202ENST00000418336 SNX27Q96L92 541 aa22.61■■□□□ 1.21
PKNOX1-202ENST00000418336 ZMAT2Q96NC0 199 aaKnown RBP22.61■■□□□ 1.21
PKNOX1-202ENST00000418336 ST6GALNAC4Q9H4F1 302 aa22.61■■□□□ 1.21
PKNOX1-202ENST00000418336 CCDC39Q9UFE4 941 aa22.61■■□□□ 1.21
PKNOX1-202ENST00000418336 TBX20Q9UMR3 447 aa22.61■■□□□ 1.21
PKNOX1-202ENST00000418336 HCFC2Q9Y5Z7 792 aa22.61■■□□□ 1.21
PKNOX1-202ENST00000418336 FRMD3A2A2Y4 597 aa22.6■■□□□ 1.21
PKNOX1-202ENST00000418336 TRAK2O60296 914 aa22.6■■□□□ 1.21
PKNOX1-202ENST00000418336 HSP90AA1P07900 732 aaKnown RBP22.6■■□□□ 1.21
PKNOX1-202ENST00000418336 GTF2BQ00403 316 aa22.6■■□□□ 1.21
PKNOX1-202ENST00000418336 DNM1Q05193 864 aaKnown RBP22.6■■□□□ 1.21
PKNOX1-202ENST00000418336 SOX4Q06945 474 aaPredicted RBP22.6■■□□□ 1.21
PKNOX1-202ENST00000418336 TMEM132AQ24JP5 1023 aa22.6■■□□□ 1.21
PKNOX1-202ENST00000418336 ZBTB33Q86T24 672 aa22.6■■□□□ 1.21
PKNOX1-202ENST00000418336 RASSF8Q8NHQ8 419 aa22.6■■□□□ 1.21
PKNOX1-202ENST00000418336 SUSD6Q92537 303 aa22.6■■□□□ 1.21
PKNOX1-202ENST00000418336 PANK2Q9BZ23 570 aa22.6■■□□□ 1.21
PKNOX1-202ENST00000418336 VWA8A3KMH1 1905 aa22.59■■□□□ 1.21
PKNOX1-202ENST00000418336 SMIM28A0A1B0GU29 152 aa22.59■■□□□ 1.21
PKNOX1-202ENST00000418336 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.59■■□□□ 1.21
PKNOX1-202ENST00000418336 FSD2A1L4K1 749 aa22.59■■□□□ 1.21
PKNOX1-202ENST00000418336 C19orf67A6NJJ6 358 aa22.59■■□□□ 1.21
PKNOX1-202ENST00000418336 CUTAO60888 179 aa22.59■■□□□ 1.21
PKNOX1-202ENST00000418336 FAM13AO94988 1023 aa22.59■■□□□ 1.21
PKNOX1-202ENST00000418336 KIF4AO95239 1232 aa22.59■■□□□ 1.21
PKNOX1-202ENST00000418336 THP07101 528 aa22.59■■□□□ 1.21
PKNOX1-202ENST00000418336 FOXD4L6Q3SYB3 417 aaPredicted RBP22.59■■□□□ 1.21
PKNOX1-202ENST00000418336 GLRA4Q5JXX5 417 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms