RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 TBC1D31Q96DN5 1066 aa12.75□□□□□ -0.37
LIMK1-202ENST00000418310 ECEL1O95672 775 aa12.75□□□□□ -0.37
LIMK1-202ENST00000418310 CAP2P40123 477 aa12.75□□□□□ -0.37
LIMK1-202ENST00000418310 DHX34Q14147 1143 aaKnown RBP12.75□□□□□ -0.37
LIMK1-202ENST00000418310 KYNUQ16719 465 aa12.75□□□□□ -0.37
LIMK1-202ENST00000418310 ANKRD20A8PQ5CZ79 823 aa12.75□□□□□ -0.37
LIMK1-202ENST00000418310 KAZNQ674X7 775 aa12.75□□□□□ -0.37
LIMK1-202ENST00000418310 PNMA8AQ86V59 439 aaPredicted RBP12.75□□□□□ -0.37
LIMK1-202ENST00000418310 BSNDQ8WZ55 320 aa12.75□□□□□ -0.37
LIMK1-202ENST00000418310 HERC5Q9UII4 1024 aaKnown RBP12.75□□□□□ -0.37
LIMK1-202ENST00000418310 NOCTQ9UK39 431 aaKnown RBP12.75□□□□□ -0.37
LIMK1-202ENST00000418310 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.75□□□□□ -0.37
LIMK1-202ENST00000418310 ASTN2O75129 1339 aaPredicted RBP12.75□□□□□ -0.37
LIMK1-202ENST00000418310 ANKRD31Q8N7Z5 1873 aa12.74□□□□□ -0.37
LIMK1-202ENST00000418310 FAM187AA6NFU0 413 aa12.74□□□□□ -0.37
LIMK1-202ENST00000418310 PEX5P50542 639 aa12.74□□□□□ -0.37
LIMK1-202ENST00000418310 TCP11Q8WWU5 503 aa12.74□□□□□ -0.37
LIMK1-202ENST00000418310 ACSF2Q96CM8 615 aaPredicted RBP12.74□□□□□ -0.37
LIMK1-202ENST00000418310 WNK4Q96J92 1243 aa12.74□□□□□ -0.37
LIMK1-202ENST00000418310 CEP170P1Q96L14 293 aa12.74□□□□□ -0.37
LIMK1-202ENST00000418310 NT5C1BQ96P26 610 aa12.74□□□□□ -0.37
LIMK1-202ENST00000418310 PDGFDQ9GZP0 370 aaPredicted RBP12.74□□□□□ -0.37
LIMK1-202ENST00000418310 CDC42EP4Q9H3Q1 356 aaKnown RBP12.74□□□□□ -0.37
LIMK1-202ENST00000418310 KMT5AQ9NQR1 393 aa12.74□□□□□ -0.37
LIMK1-202ENST00000418310 PI4K2BG5E9Z4 385 aa12.74□□□□□ -0.37
LIMK1-202ENST00000418310 DHX15O43143 795 aaKnown RBP12.74□□□□□ -0.37
LIMK1-202ENST00000418310 RIPK2O43353 540 aa12.74□□□□□ -0.37
LIMK1-202ENST00000418310 CFHP08603 1231 aa12.74□□□□□ -0.37
LIMK1-202ENST00000418310 RRM1P23921 792 aa12.74□□□□□ -0.37
LIMK1-202ENST00000418310 SCTRP47872 440 aa12.74□□□□□ -0.37
LIMK1-202ENST00000418310 NPTX2P47972 431 aa12.74□□□□□ -0.37
LIMK1-202ENST00000418310 MFAP3P55082 362 aa12.74□□□□□ -0.37
LIMK1-202ENST00000418310 RWDD2BP57060 319 aa12.74□□□□□ -0.37
LIMK1-202ENST00000418310 PRAMEF18Q5VWM3 479 aa12.74□□□□□ -0.37
LIMK1-202ENST00000418310 CYP4F22Q6NT55 531 aa12.74□□□□□ -0.37
LIMK1-202ENST00000418310 HIBCHQ6NVY1 386 aaPredicted RBP12.74□□□□□ -0.37
LIMK1-202ENST00000418310 C6orf89Q6UWU4 347 aa12.74□□□□□ -0.37
LIMK1-202ENST00000418310 SEC14L1Q92503 715 aa12.74□□□□□ -0.37
LIMK1-202ENST00000418310 HAUS1Q96CS2 278 aa12.74□□□□□ -0.37
LIMK1-202ENST00000418310 C9orf72Q96LT7 481 aa12.74□□□□□ -0.37
LIMK1-202ENST00000418310 RMDN3Q96TC7 470 aa12.74□□□□□ -0.37
LIMK1-202ENST00000418310 FAM129AQ9BZQ8 928 aa12.74□□□□□ -0.37
LIMK1-202ENST00000418310 AGO4Q9HCK5 861 aaKnown RBP12.74□□□□□ -0.37
LIMK1-202ENST00000418310 BAIAP2L1Q9UHR4 511 aa12.74□□□□□ -0.37
LIMK1-202ENST00000418310 R3HDM2Q9Y2K5 976 aaKnown RBP12.74□□□□□ -0.37
LIMK1-202ENST00000418310 GSTTP1A0A1W2PQM5 241 aa12.73□□□□□ -0.37
LIMK1-202ENST00000418310 MIF4GDA9UHW6 222 aaKnown RBP12.73□□□□□ -0.37
LIMK1-202ENST00000418310 CCNE2O96020 404 aa12.73□□□□□ -0.37
LIMK1-202ENST00000418310 ACOT2P49753 483 aa12.73□□□□□ -0.37
LIMK1-202ENST00000418310 EIF3BP55884 814 aaKnown RBP12.73□□□□□ -0.37
LIMK1-202ENST00000418310 ERMARDQ5T6L9 678 aa12.73□□□□□ -0.37
LIMK1-202ENST00000418310 CCDC197Q8NCU1 140 aa12.73□□□□□ -0.37
LIMK1-202ENST00000418310 TLCD1Q96CP7 247 aa12.73□□□□□ -0.37
LIMK1-202ENST00000418310 C11orf70Q9BRQ4 267 aa12.73□□□□□ -0.37
LIMK1-202ENST00000418310 PASKQ96RG2 1323 aa12.73□□□□□ -0.37
LIMK1-202ENST00000418310 CLTAP09496 248 aa12.73□□□□□ -0.37
LIMK1-202ENST00000418310 TNNI1P19237 187 aa12.73□□□□□ -0.37
LIMK1-202ENST00000418310 CD58P19256 250 aa12.73□□□□□ -0.37
LIMK1-202ENST00000418310 RDXP35241 583 aaKnown RBP12.73□□□□□ -0.37
LIMK1-202ENST00000418310 KRT39Q6A163 491 aa12.73□□□□□ -0.37
LIMK1-202ENST00000418310 SV2AQ7L0J3 742 aa12.73□□□□□ -0.37
LIMK1-202ENST00000418310 TBC1D1Q86TI0 1168 aaPredicted RBP12.73□□□□□ -0.37
LIMK1-202ENST00000418310 SPATS2Q86XZ4 545 aaKnown RBP12.73□□□□□ -0.37
LIMK1-202ENST00000418310 RIT2Q99578 217 aa12.73□□□□□ -0.37
LIMK1-202ENST00000418310 TXLNGYQ9BZA5 131 aa12.73□□□□□ -0.37
LIMK1-202ENST00000418310 ADAM7Q9H2U9 754 aa12.73□□□□□ -0.37
LIMK1-202ENST00000418310 GABBR1Q9UBS5 961 aa12.73□□□□□ -0.37
LIMK1-202ENST00000418310 TTC7AQ9ULT0 858 aaPredicted RBP12.73□□□□□ -0.37
LIMK1-202ENST00000418310 GREB1LQ9C091 1923 aaPredicted RBP12.73□□□□□ -0.37
LIMK1-202ENST00000418310 LTBP1Q14766 1721 aa12.73□□□□□ -0.37
LIMK1-202ENST00000418310 PIAS1O75925 651 aa12.73□□□□□ -0.37
LIMK1-202ENST00000418310 GH1P01241 217 aa12.73□□□□□ -0.37
LIMK1-202ENST00000418310 ADCY8P40145 1251 aa12.73□□□□□ -0.37
LIMK1-202ENST00000418310 DMP1Q13316 513 aaPredicted RBP12.73□□□□□ -0.37
LIMK1-202ENST00000418310 ARHGEF16Q5VV41 709 aa12.73□□□□□ -0.37
LIMK1-202ENST00000418310 EIF1ADQ8N9N8 165 aaKnown RBP12.73□□□□□ -0.37
LIMK1-202ENST00000418310 SYTL5Q8TDW5 730 aaPredicted RBP12.73□□□□□ -0.37
LIMK1-202ENST00000418310 FAM151AQ8WW52 585 aa12.73□□□□□ -0.37
LIMK1-202ENST00000418310 TAOK3Q9H2K8 898 aa12.73□□□□□ -0.37
LIMK1-202ENST00000418310 FGFR1OP2Q9NVK5 253 aa12.73□□□□□ -0.37
LIMK1-202ENST00000418310 RAB20Q9NX57 234 aa12.73□□□□□ -0.37
LIMK1-202ENST00000418310 SAMD15Q9P1V8 674 aa12.73□□□□□ -0.37
LIMK1-202ENST00000418310 PFASO15067 1338 aa12.73□□□□□ -0.37
LIMK1-202ENST00000418310 ZNF536O15090 1300 aa12.73□□□□□ -0.37
LIMK1-202ENST00000418310 BHMG1C9JSJ3 638 aaPredicted RBP12.72□□□□□ -0.37
LIMK1-202ENST00000418310 SCP2P22307 547 aa12.72□□□□□ -0.37
LIMK1-202ENST00000418310 PSMC4P43686 418 aa12.72□□□□□ -0.37
LIMK1-202ENST00000418310 C11orf63Q6NUN7 778 aa12.72□□□□□ -0.37
LIMK1-202ENST00000418310 FAM71AQ8IYT1 594 aa12.72□□□□□ -0.37
LIMK1-202ENST00000418310 PARD3BQ8TEW8 1205 aa12.72□□□□□ -0.37
LIMK1-202ENST00000418310 ARHGEF2Q92974 986 aaKnown RBP12.72□□□□□ -0.37
LIMK1-202ENST00000418310 ABCF3Q9NUQ8 709 aa12.72□□□□□ -0.37
LIMK1-202ENST00000418310 TBX20Q9UMR3 447 aa12.72□□□□□ -0.37
LIMK1-202ENST00000418310 AUHQ13825 339 aaKnown RBP12.72□□□□□ -0.37
LIMK1-202ENST00000418310 ZNF394Q53GI3 561 aa12.72□□□□□ -0.37
LIMK1-202ENST00000418310 EMC10Q5UCC4 262 aa12.72□□□□□ -0.37
LIMK1-202ENST00000418310 SLC9A9Q8IVB4 645 aa12.72□□□□□ -0.37
LIMK1-202ENST00000418310 FBXL13Q8NEE6 735 aa12.72□□□□□ -0.37
LIMK1-202ENST00000418310 STRA6Q9BX79 667 aa12.72□□□□□ -0.37
LIMK1-202ENST00000418310 SEPT9Q9UHD8 586 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms